• 제목/요약/키워드: Chromosome 4

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유전자 알고리즘 하드웨어 구현을 위한 전용 원칩 컴퓨터의 설계 (Embedded One Chip Computer Design for Hardware Implementation of Genetic Algorithm)

  • 박세현;이언학
    • 한국멀티미디어학회논문지
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    • 제4권1호
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    • pp.82-90
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    • 2001
  • 유전자 알고리즘(GA: Genetic Algorithm)은 다양한 영역에서 NP 문제를 해결하는 방법으로 알려져 있다. GA는 긴 연산 시간을 필요하다는 결점 때문에 최근 GA를 하드웨어로 구현하려는 연구가 주목 받아왔다. 본 논문은 GA의 하드웨어 구현을 위한 전용 원칩 컴퓨터를 제안한다. 제안된 전용 원칩 컴퓨터는16 비트 CPU core와 하드웨어 GA로 구성되어 있다. 기존의 하드웨어 GA는 GA의 처리하는데 있어서 메인 컴퓨터에 의존적이었으나 제안된 전용 원칩 컴퓨터는 메인 컴퓨터에 독립적이다. 또한 기존의 하드웨어 GA는 염색체의 길이가 고정되어 있는 데 비해 제안된 전용 원칩 컴퓨터의 염색체의 길이는 가변이며 16 비트 단위로 Pipeline 처리를 한다. 실험 결과는 제안된 원칩 컴퓨터가 랜덤 비트 동기 회로를 위한 진화 하드웨어 설계에 적용할 수 있다는 것을 보여준다.

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한국 재래종 옥수수 체세포 염색체의 C-분염패턴 (C-banding Pattern of Mitotic Chromosome in Korean Indigenous Maize)

  • 이인섭;최봉호;거스타프손 제이 피
    • 한국작물학회지
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    • 제41권4호
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    • pp.429-433
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    • 1996
  • Giemsa C-banding 방법에 의하여 한국 재래종 옥수수 핵형 및 염색체의 특성을 알아보고자 옥수수의 근단 생장점을 이용하여 조사 분석하였다. 이 방법은 한국 재래종 옥수수의 핵형 분석 및 염색체의 특성 연구에도 효과적으로 활용할 수 있는 방법임이 확인되었다. 조사된 재래종 옥수수에서는 각각 10개의 heterochrornatic knob이 발견되었으며 이것들의 크기와 위치는 계통별로 다른 것으로 나타났고, 모두가 6번 염색체에 부수체를 가지고 있었다. 10번 염색체를 100으로 해서 비교해 본 각 염색체들의 상대적 길이는 조사된 계통별로 큰 차이가 있었다.

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A Characteristic EEG Pattern of Angelman Syndrome

  • Yoon, Joong-Soo;Song, Woon-Heung;Choi, Hwa-Sik
    • 대한임상검사과학회지
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    • 제42권2호
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    • pp.97-102
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    • 2010
  • The two new female cases of Angelman syndrome (AS) were described, which diagnosed on the basis of clinical features (dysmorphic facial features, severe mental retardation with absent speech, peculiar jerky movements, ataxic gait and paroxysms of inappropriate laughter) and neurophysiological findings. Failure to detect the deletion of the long arm of chromosome 15 or the absence of epileptic seizure were not considered sufficient to exclude a diagnosis of AS. Feeding problems, developmental delay and early signs of ataxia, especially tremor on handling objects and unstable posture when seated, proved effective as the clinical markers for early diagnosis of AS. Most of the authors agreed about the existence of three main EEG patterns in AS which may appear in isolation or in various combinations in the same patient. The most frequently observed pattern in children has prolonged runs of high amplitude rhythmic 2-3 Hz activity predominantly over the frontal region with superimposed interictal epileptiform discharges. High amplitude rhythmic 4-6 Hz activity, prominent in the occipital regions, with spikes, which can be facilitated by eye closure, is often seen in children under the age of 12 years. The EEG findings are characteristic of AS when seen in the appropriate clinical context and can be helpful to identify AS patients at an early age when genetic counselling may be particularly important.

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침전에 의한 돼지의 X-와 Y-정자의 분이에 관한 연구 (Studies on the Separation of X and Y-Chromosome bearing Spermatozoa by Sedimentation in Boar Semen)

  • 정용기;이용빈;임경순
    • 한국가축번식학회지
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    • 제5권2호
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    • pp.49-55
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    • 1981
  • This experiment was conducted to investigate the effects of temperature and time of sedimentation and dilutor on the a, pp.arance of B-body in top and bottom fractions at separation of X and Y- chromosome bearing spermatozoa in boar semen. 1. The top fraction showed higher a, pp.arence rate of B-body than the bottom. 2. Sixty minutes at 5 and 15$^{\circ}C$ and 90 min, at 25$^{\circ}C$ showed highest difference of B-body a, pp.arence rate between top and bottom fractions. The highest difference was shown in the treatments of Sg at 5$^{\circ}C$, C at 15$^{\circ}C$ and P at 25$^{\circ}C$. 3. The highest difference was shown in the treatments of 25$^{\circ}C$ and Sg for 30 min, 15$^{\circ}C$ and P for 60 min. and 25$^{\circ}C$ and P for 90 min. 4. Sixty minutes in C, P, S and Sg dilutors showed the highest difference. 5. 25$^{\circ}C$ of the temperature levels, 60 min of the time levels and P of the dilutor levels showed the highest difference. 6. The difference was given due to the individual boar.

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Application of Linkage Disequilibrium Mapping Methods to Detect QTL for Carcass Quality on Chromosome 6 Using a High Density SNP Map in Hanwoo

  • Lia, Y.;Lee, J.H.;Lee, Y.M.;Kim, J.J.
    • Asian-Australasian Journal of Animal Sciences
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    • 제24권4호
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    • pp.457-462
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    • 2011
  • The purpose of this study was to detect QTL for carcass quality on bovine chromosome (BTA) 6 using a high density SNP map in a Hanwoo population. The data set comprised 45 sires and their 427 Hanwoo steers that were born between spring of 2005 and fall of 2007. The steers that were used for progeny testing in the Hanwoo Improvement Center in Seosan, Korea, were genotyped with the 2,535SNPs on BTA6 that were embedded in the Illumina bovine SNP 50K chip. Four different linkage disequilibrium (LD) mapping models were applied to detect significant SNPs for carcass quality traits; the fixed model with a single marker, the random model with a single marker, the random model with haplotype effects using two adjacent markers, and the random model at hidden state. A total of twelve QTL were detected, for which four, one, three and four SNPs were detected on BTA6 under the respective models (p<0.001). Among the detected QTL, four, two, five and one QTL were associated with carcass weight, backfat thickness, longissimus dorsi muscle area, and marbling score, respectively (p<0.001). Our results suggest that the use of multiple LD mapping approaches may be beneficial in increasing power to detect QTL given a limited sample size and magnitude of QTL effect.

근권 길항세균 Pseudomonas fluorescens KR164에 Bacillus thuringiensis HD-1 유전자의 삽입과 발현 (Expression of Bacillus thringiensis HD-1 gene in rhizobacteria Pseudomonas fluorescens KR164)

  • 김영일;이영환;강흔수
    • Applied Biological Chemistry
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    • 제35권4호
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    • pp.227-231
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    • 1992
  • 식물병원성 사상균에 대해 길항력을 갖는 그람음성 Pseudomonas fluorescens KR164의 chromosome에 그람 양성인 Bacillus thuringiensis(BT)의 HD-1 toxin gene을 삽입하기 위하여 이 유전자를 갖는 plasmids pSUPBT과 pSUPBTR을 작성하였다. Conjugation을 이용한 transposition으로 P. fluorescens KR164의 chromosome에 이 plasmids를 삽입시켜 BT toxin 유전자를 갖는 P. fluorescens KR164의 변이균주를 조제하였다. Southern blotting으로 균주의 cellular DNAs를 조사한 결과 모든 변이균주에서 한 개 이상의 BT toxin gene의 삽입이 확인 되었으며 독소단백질의 존재 역시 SDS-PAGE에 의해서 확인되었으며 이러한 독소단백질의 결정 생성은 전자현미경에서도 확인되었다.

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Effect of Genotype of Donor Plants on the Success of Anther Culture in Sweet Pepper (Capsicum annuum L.)

  • Shrestha, Surendra Lal;Kang, Won-Hee
    • 한국자원식물학회지
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    • 제22권6호
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    • pp.506-512
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    • 2009
  • To study the effect of genotype of donor plants on anther culture, anthers of nine hybrid cultivars (Derby, Special, Bossanova, Minipaprika, Fiesta, Boogie, Phenlene, Kufrah, and Clarity) of sweet pepper (Capsicum annuum L.) were cultured in a petridish containing C medium (Sibi, Dumas De Vaulx medium) supplemented with 0.1 mg/L 2,4-D and 0.1 mg/L kinetin, 3% sucrose and 0.32% Phytagel. The cultures were incubated in the dark at $35^{\circ}C$ for seven days, and then cultured at $25^{\circ}C$ with a photoperiod of 16 hr. daylength for 40 days. Frequency of callus formation and plant regeneration was varied among cultivars. Callus formation was ranged from 6% in Phenlene to 69.8% in Kufrah. The highest percentage of regenerated plantlets was obtained in cv. Phenlene (2.67%) followed by Bossanova (2.41%). Result of ploidy analysis; chromosome number observation and flowcytometry analysis, showed that haploid plants could be developed from all of these hybrid cultivars except cv. Fiesta, where highest percentage of haploid plants were obtained in Minipaprika (40%) followed by cv. Bossanova (36.1%). Haploid plants derived from these hybrid cultivars contained single set of chromosome (12 in numbers), higher stomata density (numbers), and smaller sized stomata as compare to diploid plants. The mean length of stomata was 26.9 ${\mu}m$ in haploid plants and 35.7 ${\mu}m$ in diploids.

Cytological and Morphological Characterization of Anther Derived Plants from Sweet Pepper (Capsicum annuum L.) cv. 'Special'

  • Shrestha, Surendra Lal;Luitel, Binod Prasad;Lee, Taek Jong;Kang, Won Hee
    • 한국육종학회지
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    • 제42권5호
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    • pp.431-438
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    • 2010
  • Anthers of sweet pepper $F_1$ cultivar 'Special' were cultured on Dumas De Vaulx (C medium), supplemented with $0.1mgL^{-1}$ 2, 4-D and $0.1mg{\cdot}L^{-1}$ kinetin with 3% sucrose, and 0.32% phytagel. The calluses obtained were further sub-cultured on Murashige and Skoog (MS) medium without growth regulators for regeneration. Regenerated plantlets were grown in plastic pots under plastic house and characterized their cytological and morphological characters in spring, 2008. Twenty percent plantlets were identified as haploid plants after chromosome and ploidy analysis. Haploid plants contained 12 chromosomes, high stomatal density with small stomatal length as compared to diploid plants. Stomatal length in haploids was 23.3% smaller than diploids. Haploid plants were characterized as small leaf and petiole size, poor vigor, thin stem and short plant height, short internodes and small flower buds, fruit size and fruit weight as compared to diploid plants and most of the haploid fruits were seedless. SP55, SP62, SP68, SP72 and SP77 are found high yielding double haploids with high total soluble content (8.6, 8.7, 9.2, 9.1 and $9.8^{\circ}Brix$, respectively) and desirable fruit shape, and recommended them to exploit as inbred lines for heterosis breeding.

Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf

  • Oh, Young Joon;Kim, Joon Yong;Lee, Jieun;Lim, Seul Ki;Yu, Dohyeon;Oh, Yeon-su;Park, Jinho;Choi, Hak-Jong
    • Journal of Animal Science and Technology
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    • 제63권5호
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    • pp.1207-1210
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    • 2021
  • Lactobacillus amylovorus are known to exist in the intestinal flora of healthy cattle or pigs. The L. amylovorus strain 1394N20 was isolated from the feces of the Hanwoo calf (Bos taurus coreanae). The genome of strain 1394N20 consists of a single circular chromosome (2,176,326 bp) with overall guanine + cytosine content of 37.8 mol%. Moreover, 2,281 protein-coding sequences, 15 rRNAs, and 65 tRNAs genes were identified in the chromosome based on the results of annotation. The bacterium has a gene encoding endoglucanase, an enzyme that hydrolyzes the 1,4-β-D-glycosidic linkages in cellulose, hemicellulose, lichenin, and cereal β-D-glucans. Genomic sequencing of L. amylovorus strain 1394N20 reveals the immense potential of the strain as a probiotic with nutrient digestibility.

Expression of the C1orf31 Gene in Human Embryonic Stem Cells and Cancer Cells

  • Ahn, Jin-Seop;Moon, Sung-Hwan;Yoo, Jung-Ki;Jung, Hyun-Min;Chung, Hyung-Min;Kim, Jin-Kyeoung
    • Reproductive and Developmental Biology
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    • 제32권4호
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    • pp.223-227
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    • 2008
  • Human embryonic stem (ES) cells retain the capacity for self-renewal, are pluripotent and differentiate into the three embryonic germ layer cells. The regulatory transcription factors Oct4, Nanog and Sox2 play an important role in maintaining the pluripotency of human ES cells. The aim of this research was to identify unknown genes upregulated in human ES cells along with Oct4, Nanog, and Sox2. This study characterizes an unknown gene, named chromosome 1 open reading frame 31 (C1orf31) mapping to chromosome 1q42.2. The product of C1orf31 is the hypothetical protein LOC388753 having a cytochrome c oxidase subunit VIb (COX6b) motif. In order to compare expression levels of C1orf31 in human ES cells, human embryoid body cells, vascular angiogenic progenitor cells (VAPCs), cord-blood endothelial progenitor cells (CB-EPCs) and somatic cell lines, we performed RT-PCR analysis. Interestingly, C1orf31 was highly expressed in human ES cells, cancer cell lines and SV40-immortalized cells. It has a similar expression pattern to the Oct4 gene in human ES cells and cancer cells. Also, the expression level of C1orf31 was shown to be upregulated in the S phase and early G2 phase of synchronized HeLa cells, leading us to purpose that it may be involved in the S/G2 transition process. For these reasons, we assume that C1orf31 may play a role in on differentiation of human ES cells and carcinogenesis.