• Structural Engineering and Mechanics
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• 제21권3호
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• pp.275-293
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• 2005

When a thin-walled multicell box girder is subjected to an eccentric load, the distortion becomes an important global response in addition to flexure and torsion. The three global responses appear in a combined form when a conventional shell element is used thus it is not an easy task to examine the three global responses separately. This study is to propose an analysis method using conventional shell element in which the three global responses can be separately decomposed. The force decomposition method which was designed for a single-cell box girder by Nakai and Yoo is expanded herein to multicell box girders. The eccentric load is decomposed in the expanded method into flexural, torsional, and multimode distortional forces by using the force equilibrium. From the force decomposition, the combined global responses of multicell box girders can be resolved into separate responses and the distortional response which is of primary concern herein can be obtained separately. It is shown from a series of extensive comparative studies using three box girder bridge models that the expanded method produces accurate decomposed results. Noting that the separate consideration of individual global response is of paramount importance for optimized multicell box girder design, it can be said that the proposed expanded method is extremely useful for practicing engineers.

• Structural Engineering and Mechanics
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• 제61권3호
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• pp.397-406
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• 2017

The use of fiber reinforced polymer (FRP) for torsional strengthening of reinforced concrete (RC) single cell box beams has been analyzed considerably by researchers worldwide. However, little attention has been paid to torsional strengthening of multicell box girders in terms of both experimental and numerical research. This paper reports the experimental work in an overall investigation for torsional strengthening of multicell box section RC girders with externally-bonded Carbon Fiber Reinforced Polymer CFRP strips. Numerical work was carried out using non-linear finite element modeling (FEM). Good agreement in terms of torque-twist behavior, steel and CFRP reinforcement responses, and crack patterns was achieved. The unique failure modes of all the specimens were modeled correctly as well.

• 한국철도학회:학술대회논문집
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• 한국철도학회 2004년도 추계학술대회 논문집
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• pp.988-993
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• 2004

This paper considers corrosion problems in the bolt connection of weathering steel box girder bridge using the external electric type corrosion resistance method which resisted to local corrosion in coated steel surface with contacted air. The weathering steel was created a rust itself in the passive state. but a coated box girder type was easily dew form could be made galvanic cell that accelerated corrosion. so that it was ruled by protection coat with some paint. Therefore, it needed that can be applied the external electric type corrosion resistance method in coated surface. As a result of the test of polarization amount had measured that the weathering steel was higher currents than the general steel by about $5\~10\%$. Therefore. an external electric type corrosion resistance method can be used to protect local corrosion in the coated bolt connection of weathering steel box girders effectively.

• Animal cells and systems
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• 제8권3호
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• pp.205-212
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• 2004

The tumor suppressor protein p53 is stabilized by the herpes-virus-associated ubiquitin-specific protease (HAUSP), a deubiquitinating enzyme. We previously isolated and characterized a mouse orthologue of HAUSP, mHAUSP. mHAUSP cDNA consisted of 3,312 bp encodes 1,103 amino acids with a molecular weight of approximately 135 kDa containing highly conserved Cys, Asp (I), His, and Asn/Asp (II) domains. In this study, we carried out site-directed mutagenesis of 6 conserved amino acids (Cys224, Gln231, Asp296, His457, His465, and Asp482) in Cys box, QQD box, and His box. Interestingly, the conserved Gln 231 was not essential for the catalytic activity of mHAUSP. However, the other conserved amino acids were required for deubiquitinating activity of mHAUSP. We performed isopeptidase assay and confirmed that mHAUSP is able to remove ubiquitin from ubiquitinated substrates. In addition, we observed that mHAUSP induces apoptosis in HeLa cells.

• 생명과학회지
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• 제19권6호
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• pp.705-710
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• 2009

Sodium butyrate (NaBt)는 장에서 탄수화물대사로부터 생겨나는 짧은 천연지방산 사슬로 다양한 인간 암세포들 에게서 강력한 항암효능을 나타냄이 보고된 바 있지만 자세한 기전은 아직 알려져 있지 않다. 이 논문에서 우리는 NaBt가 주요 세포부착분자이면서 종양억제인자의 일종인 E-cadherin의 발현을 세포-특이적으로 촉진하는 기전을 연구하였다. 또한 NaBt는 E-eadherin의 발현을 촉진하는 것으로 알려진 p21의 발현도 증가시켰지만, NaBt에 의하여 증가한 p21은 E-cadherin의 활성화와 관련이 없음이 밝혀졌다. 그 대신에 NaBt는 CCAAT-box를 통한 E-cadherin 유전자의 프로모터 활성을 증가시킴으로써 E-cadherin의 발현을 전사수준에서 촉진하는 것 같다. 이렇게 NaBt에 의하여 증가된 E-cadherin은 주로 세포간 접촉면에 위치하면서 Hep3B 세포를 더 분화된 형태로 유도하여 NaBt의 항암활성이 나타나는 것 같다.

• 한국미생물·생명공학회지
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• 제27권6호
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• pp.440-445
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• 1999

In order to investigate structure-antibiotic activity relationships of brevinin-1 and thanatin containing Rana box composed of basic loop formed by disulfide bridge in their arboxy terminus, thanatin, brevinin 1 and their analogues (T-B1, T-B2 and B-T) in which their Rana box sequence exchanged was designed and synthesized by the solid phase method using Fmoc-chemistry. The basic sequence of Rana box of thanatin had more significant effect on both antibacterial and antifungal activity than that of brevinin 1. The tail sequence (QRM) of thanatin was found to be important in its antibacterial and antifungal activity. Rana box sequence of brevinin-1 did not have a significant effect on its antitumor and phospholipid vesicle-aggregating activities. Brevinin-1 showed stronger $\alpha$-helical structure in the membrane-mimicking environment such as SDS micelle than thanatin. A remarkable increase in a-helicity of bervinin-1 plays more important role in antibiotic activity than that of thanatin. Furthermore, antibacterial activity of thanatin against E. coli resulted from the disruptive effect against the outer cell membrane of E. coli.

• 유기물자원화
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• 제23권1호
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• pp.70-81
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• 2015

Helicase는 NTP 결합의 화학적 에너지를 이용하여 이중가닥의 DNA와 RNA를 단일가닥으로 분해하여 다양한 생체반응에 기여하는 단백질로 알려져 있으며, 이 중 DEAD-box의 단백질은 주로 RNA와 관련된 대부분의 생화학적 반응에 작용하는 ATP 의존성 helicase로 알려져 있다. 또한 이 단백질 부류에 속하는 DEAD-box3 (DDX3) gene은 척추동물뿐만 아니라 무척추동물에서의 유성 생식과 무성 생식에서 생식세포 발달 및 재생과정 중 줄기세포 분화에 중요한 역할을 하는 인자로 알려져 있다. 이에 본 연구는 강한 재생능력을 가진 것으로 알려져 있는 팔딱이 지렁이(Perionyx excavatus)에서 DDX3 gene을 동정하고 그 발현양상을 알아보고자 환대를 포함하는 성체 지렁이의 두부를 절단하여 total RNA를 추출하고, 이를 주형으로 RT-PCR을 수행하여 full length의 DDX3 gene인 Pe-DDX3를 검출하였다. Pe-DDX3는 607개 아미노산 서열로 이루어져 있으며, DEAD-box 단백질 그룹 내에서 특이적으로 보존되어 있는 9개의 motif가 존재하고 있다. 다른 분류군에 속하는 동물들과의 multiple alignment를 통해 서열 내에 보존되어 있는 아미노산 서열을 확인할 수 있었으며, 아미노산 차원에서의 계통수 분석을 통해 DDX3 (PL10) 하부그룹에 속하는 것을 알 수 있었으며, 또한, 같은 그룹에 속하는 동물 중 P. dumerilii의 PL10a, b 단백질과 가장 가까운 유연관계를 확인 할 수 있었다.

• Molecules and Cells
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• 제25권2호
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• pp.317-321
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• 2008

Members of the large family of Asb proteins are ubiquitously expressed in mammalian tissues; however, the roles of individual Asb and their function in the developmental testes have not been reported. In this report, we isolated a murine Asb4 from mouse testis. Northern blot analysis revealed that mAsb-4 was expressed only in testes and produced in a stage-specific manner during spermatogenesis. It was expressed in murine testes beginning in the fourth week after birth and extending into adulthood. Pachytene spermatocytes had the highest level of expression. Interestingly, the human homologue of mAsb-4, ASB-4 (hASB-4) was also expressed in human testis. These results suggest that ASB-4 plays pivotal roles in mammalian testis development and spermatogenesis.

• 전산구조공학
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• 제12권3호
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• pp.95-101
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• 1999

• Animal Bioscience
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• 제37권6호
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• pp.1021-1030
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• 2024

Objective: R-loops are DNA:RNA triplex hybrids, and their metabolism is tightly regulated by transcriptional regulation, DNA damage response, and chromatin structure dynamics. R-loop homeostasis is dynamically regulated and closely associated with gene transcription in mouse zygotes. However, the factors responsible for regulating these dynamic changes in the R-loops of fertilized mouse eggs have not yet been investigated. This study examined the functions of candidate factors that interact with R-loops during zygotic gene activation. Methods: In this study, we used publicly available next-generation sequencing datasets, including low-input ribosome profiling analysis and polymerase II chromatin immunoprecipitation-sequencing (ChIP-seq), to identify potential regulators of R-loop dynamics in zygotes. These datasets were downloaded, reanalyzed, and compared with mass spectrometry data to identify candidate factors involved in regulating R-loop dynamics. To validate the functions of these candidate factors, we treated mouse zygotes with chemical inhibitors using in vitro fertilization. Immunofluorescence with an anti-R-loop antibody was then performed to quantify changes in R-loop metabolism. Results: We identified DEAD-box-5 (DDX5) and histone deacetylase-2 (HDAC2) as candidates that potentially regulate R-loop metabolism in oocytes, zygotes and two-cell embryos based on change of their gene translation. Our analysis revealed that the DDX5 inhibition of activity led to decreased R-loop accumulation in pronuclei, indicating its involvement in regulating R-loop dynamics. However, the inhibition of histone deacetylase-2 activity did not significantly affect R-loop levels in pronuclei. Conclusion: These findings suggest that dynamic changes in R-loops during mouse zygote development are likely regulated by RNA helicases, particularly DDX5, in conjunction with transcriptional processes. Our study provides compelling evidence for the involvement of these factors in regulating R-loop dynamics during early embryonic development.