• 제목/요약/키워드: Carcass trait

검색결과 146건 처리시간 0.024초

Effect of increasing levels of threonine relative to lysine on the performance and meat quality of finishing pigs

  • Upadhaya, Santi Devi;Lee, Sang Seon;Jin, Sung Giu;Wu, Zhenlong;Kim, In Ho
    • Animal Bioscience
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    • 제34권12호
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    • pp.1987-1994
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    • 2021
  • Objective: The present study aimed to evaluate the effects of varying standardized ileal digestible lysine:threonine (SID Lys:Thr) ratio in the diet on the performance and meat quality of finishing pigs. Methods: In total 192 crossbred pigs ([Landrace×Yorkshire]×Duroc, 17 weeks old), with an initial body weight (BW) of 70.6±3.9 kg were used in an 8-wk trial. Pigs were randomly allotted to one of six dietary treatments based on their initial BW and sex (8 replications; 4 pigs per pen, 2 barrows and 2 gilts). The pigs in the 6 treatments were fed diets having different SID Lys:Thr ratios such as 1:0.65, 1:0.66, 1:0.67, 1:0.68, 1:0.69, and 1:0.70. Results: A linear increment (p<0.05) in average daily gain (ADG) and trends in reduction in feed conversion ratio (FCR) were observed during day 29 to 56 of the experiment and the apparent total tract digestibility (ATTD) of dry matter tended to increase linearly (p = 0.094) at the end of the experiment (day 56) with the increase in the dietary SID Lys:Thr ratios. The backfat thickness and lean percentage increased (linear effect, p<0.05) on day 28. In addition, at day 56, a linear (p<0.05) increment in lean percentage was observed. Significant quadratic responses (p = 0.02) for pH and drip loss at day 7 (p = 0.02), a linear increase (p<0.05) in cooking loss and drip loss at day 7, and a trend in quadratic response (p = 0.07) in the lightness of meat color (L*) were observed, whereas other meat quality indices were unaffected by varying the SID Lys:Thr ratios. Conclusion: The SID Lys:Thr ratio for maximum ADG, minimum FCR and enhanced digestibility was found to be 0.70. However, for carcass trait and meat quality, the SID Lys:Thr ratio of 0.65 was enough.

The effect of progeny numbers and pedigree depth on the accuracy of the EBV with the BLUP method

  • Jang, Sungbong;Kim, So Yeon;Lee, Soo-Hyun;Shin, Min Gwang;Kang, Jimin;Lee, Dooho;Kim, Sidong;Noh, Seung Hee;Lee, Seung Hwan;Choi, Tae Jeong
    • 농업과학연구
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    • 제46권2호
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    • pp.293-301
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    • 2019
  • This study was done to estimate the effect of progeny numbers and pedigree depth on the accuracy of the estimated breeding value (EBV) using best linear unbiased prediction (BLUP) method in Hanwoo. The experiment groups (sire = 100, 200, and 300; progeny = 4 and 8) were made by random sampling and by genetic evaluation of the following traits: Body weight (BW), carcass weight (CW), eye muscle area (EMA), back fat thickness (BFT) and marbling score (MS9). As a result of the genetic evaluation, the accuracy of the EBV was roughly 30 - 60% with 4 progenies, and the accuracy of the EBV increased by about 50 - 75% with 8 progenies. In the other words, when the number of progenies increased from 4 to 8, the accuracy of the EBV simultaneously increased by about 15 - 20%. Moreover, when the number of sires was higher, variations in the accuracy of the EBV within the groups for each trait decreased. Therefore, this result indicates that not only the number of progeny but also the number of sires can affect the accuracy of the EBV. Consequently, collecting information on the progeny and careful management of that information are very important things in the Hanwoo breeding system. Therefore, the EBV can show more precise results when conducting genetic evaluations.

Genetic evaluation and accuracy analysis of commercial Hanwoo population using genomic data

  • Gwang Hyeon Lee;Yeon Hwa Lee;Hong Sik Kong
    • 한국동물생명공학회지
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    • 제38권1호
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    • pp.32-37
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    • 2023
  • This study has evaluated the genomic estimated breeding value (GEBV) of the commercial Hanwoo population using the genomic best linear unbiased prediction (GBLUP) method and genomic information. Furthermore, it analyzed the accuracy and realized accuracy of the GEBV. 1,740 heads of the Hanwoo population which were analyzed using a single nucleotide polymorphism (SNP) Chip has selected as the test population. For carcass weight (CWT), eye muscle area (EMA), back fat thickness (BFT), and marbling score (MS), the mean GEBVs estimated using the GBLUP method were 3.819, 0.740, -0.248, and 0.041, respectively and the accuracy of each trait was 0.743, 0.728, 0.737, and 0.765, respectively. The accuracy of the breeding value was affected by heritability. The accuracy was estimated to be low in EMA with low heritability and high in MS with high heritability. Realized accuracy values of 0.522, 0.404, 0.444, and 0.539 for CWT, EMA, BFT, and MS, respectively, showing the same pattern as the accuracy value. The results of this study suggest that the breeding value of each individual can be estimated with higher accuracy by estimating the GEBV using the genomic information of 18,499 reference populations. If this method is used and applied to individual selection in a commercial Hanwoo population, more precise and economical individual selection is possible. In addition, continuous verification of the GBLUP model and establishment of a reference population suitable for commercial Hanwoo populations in Korea will enable a more accurate evaluation of individuals.

Identification of CNVs and their association with the meat traits of Hanwoo

  • Chan Mi Bang;Khaliunaa Tseveen;Gwang Hyeon Lee;Gil Jong Seo;Hong Sik Kong
    • 한국동물생명공학회지
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    • 제38권3호
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    • pp.158-166
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    • 2023
  • Background: Copy number variation (CNV) can be identified using next-generation sequencing and microarray technologies, the research on the analysis of its association with meat traits in livestock breeding has significantly increased in recent years. Hanwoo is an inherent species raised in the Republic of Korea. It is now considered one of the most economically important species and a major food source mainly used for meat (Hanwoo beef). Methods: In this study, CNVs and the relationship between the obtained CNV regions (CNVRs) can be identified in the Hanwoo steer samples (n = 473) using Illumina Hanwoo SNP 50K bead chip and bioinformatic tools, which were used to locate the required data and meat traits were investigated. The PennCNV software was used for the identification of CNVs, followed by the use of the CNV Ruler software for locating the different CNVRs. Furthermore, bioinformatics analysis was performed. Results: We found a total of 2,575 autosomal CNVs (933 losses, 1,642 gains) and 416 CNVRs (289 gains, 111 losses, and 16 mixed), which were established with ranged in size from 2,183 bp to 983,333 bp and 10,004 bp to 381,836 bp, respectively. Upon analyzing the restriction of minor alleles frequency > 0.05 for meat traits association, 6 CNVRs in the carcass weight, 2 CNVRs in the marbling score, 3 CNVRs in the backfat thickness, and 2 CNVRs in the longissimus muscle area were related to the meat traits. In addition, we identified an overlap of 347 CNVRs. Moreover, 3 CNVRs were determined to have a gene that affects meat quality. Conclusions: Our results confirmed the relationship between Hanwoo CNVR and meat traits, and the possibility of overlapping candidate genes, annotations, and quantitative trait loci that results depended on to contribute to the greater understanding of CNVs in Hanwoo and its role in genetic variation among cattle livestock.

소 FASN 유전자 변이의 연관불균형과 한우 도체형질에 미치는 영향 (Characterization of the Bovine FASN Gene Variation for Carcass and Beef Quality Traits in Hanwoo)

  • 이송란;김상욱;이중재;이준헌;윤두학;김종주;정영철;전순홍;최재원;김내수;김관석
    • Journal of Animal Science and Technology
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    • 제51권3호
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    • pp.185-192
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    • 2009
  • 소 염색체 19번에 존재하는 유지방 함량 및 지방산 조성에 영향을 미치는 양적경제 형질 유전자 좌위에서 발견된 지방산 합성 효소인 FASN 유전자는 포화지방산과 불포화지방산의 함량을 조절하는 강력한 후보유전자이다. 본 연구에서 FASN 유전자의 g.17924 A>G 변이를 한우집단과 미국산 육우 집단에서 분석하였고 그 결과는 한우에서는 GG형의 개체빈도가(71%)로 매우 높았으며, 미국산육우에서는 GG형 빈도는 불과(35%)밖에 되지 않았다. 한우 품종에서 FASN 유전자의 염기서열 분석을 하여 27 개의 단일염기 변이를 발견 하였고, 그 중 9개는 본 연구에서 처음으로 밝혀지는 단일염기 변이이다. 한우 집단 100두와 수입우 집단 96에 대하여 유전자형 분석을 수행한 결과, FASN 유전자 내의 4개의 단일염기 변이의 연관 불평형 및 반수체 구역을 연구하였다. g.10568 C>T와 g.11280 G>A 단일염기 변이의 다형성은 한우집단에서 고기의 육색(P=0.004)과 고기의 조직감(P=0.0114)에 고도의 유의성이 통계적인 분석에 의하여 나타났다. 그리고 g.13125 C>T와 g.17924 G>A 다형성은 등지방두께 및 육량지수에 유의성을 관찰할 수 있었다(P=0.0179, 0.0495). 이상의 결과는 소 FASN 유전자 내의 변이들이 한우집단의 불포화 지방산 함량과 도체 형질에 연관성은 차별화된 고급한우육을 생산하기 위한 중요한 DNA 마커로써 활용가치가 있을 것으로 사료된다.

거세한우의 혈청 및 간장내 비타민 A 농도와 도체형질간의 상관관계 (Correlated Relationships Between Vitamin A Concentration in Serum and Liver and Carcass Characteristics of Hanwoo Steers)

  • 채성화;정근기;최창본
    • Journal of Animal Science and Technology
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    • 제45권4호
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    • pp.585-592
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    • 2003
  • 본 연구는 사료 중 비타민 A 농도 조절을 통한 고급육 생산 기술 개발을 위한 기초실험의 일환으로, 비타민 A가 거세 한우의 육질에 미치는 영향을 구명하고자 실시되었다. 본 연구에서는 (사)한국종축개량협회에서 주관하는 제 4회 전국한우능력평가대회(1999)에 출품된 거세한우 210두와 일반농가 거세한우 118두에 대하여 혈청 및 간장내 비타민 A 농도를 분석하고, 비타민 A 농도와 육질 및 육량 판정 항목들간 상관관계를 조사하였다. 비육전기 거세한우의 혈중 비타민 A 농도는 평균 212.0$\pm$32.7 IU/$d\ell$ 이었으며, 비육말기 거세한우의 혈중 비타민 A 농도는 117.56$\pm$43.15 IU/$d\ell$를 나타내었으며, 비육말기 거세한우의 간장내 비타민 A 농도는 평균 143.62$\pm$110 IU/g로서 개체별, 지역별, 농가별로 큰 변이를 나타내었다. 또한, 거세한우의 혈청내 비타민 A 농도는 근내지방도(r=-0.24, P<0.01), 등심내 조지방 함량(r=-0.21, P<0.01) 및 육질등급(r=-0.20, P<0.01)과 유의한 부(負)의 상관을 나타내었으며, 간장내 비타민 A plamitate는 등심내 조지방 함량(r=-0.18, P<0.01) 및 육질등급(r=-0.16, P<0.05)과 유의한 부(負)의 상관을 나타내었다. 이상의 결과를 종합해 보면, 거세한우의 혈청 및 간장내 비타민 A 농도와 근내지방도 및 육질등급간에는 유의한 부(負)의 상관이 있는 것으로 나타났다. 이러한 결과들은 한우 고급육 생산시 사료내 비타민 A 함량을 조절함으로서 근내지방도를 향상시킬 수 있다는 가능성을 시사한다. 그러나 한우 고급육 생산을 위한 거세한우의 사료내 비타민 A의 함량과 급여량 및 급여시기 등에 대한 보다 구체적인 연구가 계속해서 수행되어야 할 것으로 생각된다.

Genetic Parameters of Pre-adjusted Body Weight Growth and Ultrasound Measures of Body Tissue Development in Three Seedstock Pig Breed Populations in Korea

  • Choy, Yun Ho;Mahboob, Alam;Cho, Chung Il;Choi, Jae Gwan;Choi, Im Soo;Choi, Tae Jeong;Cho, Kwang Hyun;Park, Byoung Ho
    • Asian-Australasian Journal of Animal Sciences
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    • 제28권12호
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    • pp.1696-1702
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    • 2015
  • The objective of this study was to compare the effects of body weight growth adjustment methods on genetic parameters of body growth and tissue among three pig breeds. Data collected on 101,820 Landrace, 281,411 Yorkshire, and 78,068 Duroc pigs, born in Korean swine breeder farms since 2000, were analyzed. Records included body weights on test day and amplitude (A)-mode ultrasound carcass measures of backfat thickness (BF), eye muscle area (EMA), and retail cut percentage (RCP). Days to 90 kg body weight (DAYS90), through an adjustment of the age based on the body weight at the test day, were obtained. Ultrasound measures were also pre-adjusted (ABF, EMA, AEMA, ARCP) based on their test day measures. The (co)variance components were obtained with 3 multi-trait animal models using the REMLF90 software package. Model I included DAYS90 and ultrasound traits, whereas model II and III accounted DAYS90 and pre-adjusted ultrasound traits. Fixed factors were sex (sex) and contemporary groups (herd-year-month of birth) for all traits among the models. Additionally, model I and II considered a linear covariate of final weight on the ultrasound measure traits. Heritability ($h^2$) estimates for DAYS90, BF, EMA, and RCP ranged from 0.36 to 0.42, 0.34 to 0.43, 0.20 to 0.22, and 0.39 to 0.45, respectively, among the models. The $h^2$ estimates of DAYS90 from model II and III were also somewhat similar. The $h^2$ for ABF, AEMA, and ARCP were 0.35 to 0.44, 0.20 to 0.25, and 0.41 to 0.46, respectively. Our heritability estimates varied mostly among the breeds. The genetic correlations ($r_G$) were moderately negative between DAYS90 and BF (-0.29 to -0.38), and between DAYS90 and EMA (-0.16 to -0.26). BF had strong $r_G$ with RCP (-0.87 to -0.93). Moderately positive $r_G$ existed between DAYS90 and RCP (0.20 to 0.28) and between EMA and RCP (0.35 to 0.44) among the breeds. For DAYS90, model II and III, its correlations with ABF, AEMA, and ARCP were mostly low or negligible except the $r_G$ between DAYS90 and AEMA from model III (0.27 to 0.30). The $r_G$ between AEMA and ABF and between AEMA and ARCP were moderate but with negative and positive signs, respectively; also reflected influence of pre-adjustments. However, the $r_G$ between BF and RCP remained non-influential to trait pre-adjustments or covariable fits. Therefore, we conclude that ultrasound measures taken at a body weight of about 90 kg as the test final should be adjusted for body weight growth. Our adjustment formulas, particularly those for BF and EMA, should be revised further to accommodate the added variation due to different performance testing endpoints with regard to differential growth in body composition.

한우보증씨수소 선발지수 개선에 관한 연구 (Research on the Reformation of the Selection Index for Hanwoo Proven Bull)

  • 김효선;황정미;최태정;박병호;조광현;박철진;김시동
    • Journal of Animal Science and Technology
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    • 제52권2호
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    • pp.83-90
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    • 2010
  • 본 연구를 통하여 도체성적에 대한 경제적 가치를 산출하고 이를 토대로 새로운 한우 보증씨수소 선발지수를 제안하였다. 선발지수는 경제적으로 중요한 형질에 필요한 만큼의 가중치를 주어 개체를 효과적으로 선발하는 데 도움을 주는 강력한 도구로써 농장에서 일어나는 수입과 지출을 고려하여 선발지수를 산출할 수 있다. 최근에는 이러한 선발지수를 농장에서 자기 농장에 알맞게 개발할 수있도록 인터넷을 통하여 서비스를 제공하고 있다 (Lazenby 등. 1998). 그러나 우리나라는 조수입의 산출은 가능하지만 경비를 정확히 산출할 수 있는 농가가 드물기 때문에 아직 농가차원에서 적절한 선발지수를 만들어 사용하는 것은 어려운 것으로 보인다. 또한 이러한 이유로 인하여 한우 보증씨수소를 선발함에 있어 비용부분을 고려하지 못하고 조수익에 의존하여 지수를 만들 수밖에 없는 문제를 안고 있다. 아울러 선발에서 고려할 수 있는 갈비생산량, 등심생산량, 안심생산량, 정육율 등 도체에서 얻을 수 있는 다양한 형질의 개발과 측정이 필요하고, 암소선발을 위해서는 농가의 번식기록을 통해 얻을 수 있는 번식형질에 대한 조사가 이루어져야 미국과 같이 다양한 선발지수를 개발하고 활용 (Greiner, 2006)하여 다양화로 나가는 소비시장에 적절히 대응해 나갈 수 있을 것이다.

Screening for candidate genes related with histological microstructure, meat quality and carcass characteristic in pig based on RNA-seq data

  • Ropka-Molik, Katarzyna;Bereta, Anna;Zukowski, Kacper;Tyra, Miroslaw;Piorkowska, Katarzyna;Zak, Grzegorz;Oczkowicz, Maria
    • Asian-Australasian Journal of Animal Sciences
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    • 제31권10호
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    • pp.1565-1574
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    • 2018
  • Objective: The aim of the present study was to identify genetic variants based on RNA-seq data, obtained via transcriptome sequencing of muscle tissue of pigs differing in muscle histological structure, and to verify the variants' effect on histological microstructure and production traits in a larger pig population. Methods: RNA-seq data was used to identify the panel of single nucleotide polymorphisms (SNPs) significantly related with percentage and diameter of each fiber type (I, IIA, IIB). Detected polymorphisms were mapped to quantitative trait loci (QTLs) regions. Next, the association study was performed on 944 animals representing five breeds (Landrace, Large White, Pietrain, Duroc, and native Puławska breed) in order to evaluate the relationship of selected SNPs and histological characteristics, meat quality and carcasses traits. Results: Mapping of detected genetic variants to QTL regions showed that chromosome 14 was the most overrepresented with the identification of four QTLs related to percentage of fiber types I and IIA. The association study performed on a 293 longissimus muscle samples confirmed a significant positive effect of transforming acidic coiled-coil-containing protein 2 (TACC2) polymorphisms on fiber diameter, while SNP within forkhead box O1 (FOXO1) locus was associated with decrease of diameter of fiber types IIA and IIB. Moreover, subsequent general linear model analysis showed significant relationship of FOXO1, delta 4-desaturase, sphingolipid 1 (DEGS1), and troponin T2 (TNNT2) genes with loin 'eye' area, FOXO1 with loin weight, as well as FOXO1 and TACC2 with lean meat percentage. Furthermore, the intramuscular fat content was positively associated (p<0.01) with occurrence of polymorphisms within DEGS1, TNNT2 genes and negatively with occurrence of TACC2 polymorphism. Conclusion: This study's results indicate that the SNP calling analysis based on RNA-seq data can be used to search candidate genes and establish the genetic basis of phenotypic traits. The presented results can be used for future studies evaluating the use of selected SNPs as genetic markers related to muscle histological profile and production traits in pig breeding.

Association of the thyroid hormone responsive spot 14 alpha gene with growth-related traits in Korean native chicken

  • Cahyadi, Muhammad;Park, Hee-Bok;Seo, Dong Won;Jin, Shil;Choi, Nuri;Heo, Kang Nyeong;Kang, Bo Seok;Jo, Cheorun;Lee, Jun Heon
    • Asian-Australasian Journal of Animal Sciences
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    • 제33권11호
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    • pp.1755-1762
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    • 2020
  • Objective: Thyroid hormone responsive spot 14 alpha (THRSP) has been used to investigate the regulation of de novo lipogenesis because the variation of THRSP mRNA content in the tissue affects directly the ability of that tissue to synthetize lipids. Also, this gene responds to thyroid hormone stimulation and high level of carbohydrate feeding or insulin-injection. This study was carried out to investigate variations within THRSP and their effects on body and carcass weights in Korean native chicken (KNC). Methods: A total of 585 chickens which represent the five lines of KNC (Black, Gray-Brown, Red-Brown, White, and Yellow-Brown) were reared and body weight data were recorded every two weeks from hatch until 20 weeks of age. Polymerase chain reaction- restriction fragment length polymorphism, DNA chips for Agilent 2100 Bioanalyzer, and Fluidigm Genotyping Technology, were applied to genotype selected markers. A linear mixed-effect model was used to access association between these single nucleotide polymorphism (SNP) markers and growth-related traits. Results: A total of 30 polymorphisms were investigated in THRSP. Of these, nine SNPs for loci were selected to perform association analyses. Significant associations were detected between g.-49G>T SNP with body weight at 20 weeks of age (BW20), g.451T>C SNP with growth at 10 to 12 weeks of age (GR10-12), and g.1432A>C SNP with growth at 14 to 16 weeks trait (GR14-16) and body weight at 18 weeks of age (BW18). Moreover, diplotype of the THRSP gene significantly affected body weight at 12 weeks of age (BW12) and GR10-12 traits. Diplotype of ht1/ht2 was favorable for BW12 and GR10-12 traits. Conclusion: These results suggest that THRSP can be regarded as a candidate gene for growth traits in KNC.