• Title/Summary/Keyword: CYC8

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Phenotypic Suppression of Rad53 Mutation by CYC8 (CYC8에 의한 rad53 돌연변이의 표현형 억제에 대한 연구)

  • Park, Kyoung-Jun;Choi, Do-Hee;Kwon, Sung-Hun;Kim, Joon-Ho;Bae, Sung-Ho
    • Korean Journal of Microbiology
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    • v.46 no.2
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    • pp.122-126
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    • 2010
  • RAD53 functions as an effector kinase of checkpoint pathways in Saccharomyces cerevisiae, which plays a central role to regulate many downstream cellular processes in response to DNA damage. It also involves in transcriptional activation of various genes including RNR genes which encode the key enzyme required for dNTP synthesis. In this study, we identified CYC8 as a suppressor for the hydroxyurea sensitivity of $rad53{\Delta}$ mutation. $Rad53{\Delta}$ mutant transformed with a multi-copy plasmid containing CYC8 showed increased hydroxyurea resistance. In contrast, TUP1 which forms a complex with CYC8 did not function as a suppressor. In the case of mutations, both $cyc8{\Delta}$ and $tup1{\Delta}$ suppressed hydroxyurea sensitivity of $rad53{\Delta}$. Since CYC8 can propagate as a prion in yeast, overexpression of CYC8 induced misfolding of the normal CYC8 proteins, resulting in dominant cyc8-phenotype. Therefore, it is suggested that CYC8 can act as a multi-copy suppressor due to its prion property. It was observed that the levels of RNR transcription were increased in the yeast strains containing either multi-copies of CYC8 gene or $cyc8{\Delta}$ mutation, suggesting that the increased level of RNR will elevate the intracellular pools of dNTPs, which, in turn, suppress the phenotype of $rad53{\Delta}$ mutation.

Possible involvement of temperature-entrainable timing system in arrhythmic mutant flies in Drosophila melanogaster

  • Yoshii, Taishi;Tomioka, Kenji
    • Journal of Photoscience
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    • v.9 no.2
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    • pp.240-242
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    • 2002
  • In Drosophila melanogaster, it is known that the circadian clock consists of an autoregulatory feedback loop, which includes so-called clock genes, such as per, tim, dClk and cyc and produces periodical expression of per. It is recently suggested, however, that the circadian oscillation without the rhythmical expression of per is involved in the regulation of circadian locomotor rhythms. In the present study, we examined the existence and the property of the possible per-less oscillation using arrhythmic clock mutant flies carrying per$^{01}$, tim$^{01}$, dClk$^{Jrk}$ or cyc$^{01}$. When temperature cycles consisting of 25$^{\circ}$C and 30$^{\circ}$C with varying periods (T = 8~32 hr) were given, they showed rhythms synchronizing with the given cycle under constant darkness (DD). per$^{01}$ and tim$^{01}$ flies always showed a peak around 7 hr after the onset of thermophase irrespective of Ts of temperature cycles, while dClk$^{Jrk}$ and cyc$^{01}$ flies did not. In addition, several days were necessary to establish a clear temperature entrainment in per$^{01}$ and tim$^{01}$ flies, when they were transferred from a constant temperature to a temperature cycle under DD. These results suggest that per$^{01}$ and tim$^{01}$ flies have a temperature-entrainable weak oscillatory mechanism. The fact that dClk$^{Jrk}$ and cyc$^{01}$ flies did not show any sign of the endogenous oscillation suggests that the per-less oscillatory mechanism may require CLK and CYC.

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Effect of the Buffered-template on the Property of YBCO Superconducting Film Deposited by MOCVD Method (MOCVD 법에 의해 제조된 YBCO 초전도 박막의 물성에 대한 완충층 템플릿의 영향)

  • Jun, Byung-Hyuk;Choi, Jun-Kyu;Kim, Chan-Joong
    • Progress in Superconductivity
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    • v.8 no.1
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    • pp.27-32
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    • 2006
  • [$YBa_2Cu_3O_{7-x}$] thin films were deposited on various buffered-templates by a metal organic chemical vapor deposition(MOCVD). Three different templates of $CeO_2/YSZ/CeO_2/pure-Ni(CYC),\;CeO_2/YSZ/Y_2O_3/Ni-3at.%W(YYC)$ and $CeO_2/IBAD-YSZ$/stainless steel were used. The Ni and Ni-W alloy tapes were biaxially textured by cold rolling and annealing heat treatment. The dense YBCO films were grown on both the IBAD and YYC templates with no microcrack, while the YBCO films on the CYC templates were grown with the formation of microcracks and NiO. The YBCO film on the YYC template showed the higher $I_c$ than that on CYC template. Especially, the IBAD templates with a thin $CeO_2$(type I) and thick $CeO_2$(type II) top layer were used to compare the deposition nature of the YBCO on them. Comparing the current property of the YBCO films on IBAD templates, the YBCO film deposited on thick $CeO_2$ layer was better than the film on thin $CeO_2$ layer.

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Construction of Korean Knowledge Base Based on Machine Learning from Wikipedia (위키백과로부터 기계학습 기반 한국어 지식베이스 구축)

  • Jeong, Seok-won;Choi, Maengsik;Kim, Harksoo
    • Journal of KIISE
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    • v.42 no.8
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    • pp.1065-1070
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    • 2015
  • The performance of many natural language processing applications depends on the knowledge base as a major resource. WordNet, YAGO, Cyc, and BabelNet have been extensively used as knowledge bases in English. In this paper, we propose a method to construct a YAGO-style knowledge base automatically for Korean (hereafter, K-YAGO) from Wikipedia and YAGO. The proposed system constructs an initial K-YAGO simply by matching YAGO to info-boxes in Wikipedia. Then, the initial K-YAGO is expanded through the use of a machine learning technique. Experiments with the initial K-YAGO shows that the proposed system has a precision of 0.9642. In the experiments with the expanded part of K-YAGO, an accuracy of 0.9468 was achieved with an average macro F1-measure of 0.7596.

Visual-Weighted DCT Coding for Monochrome Still Images (흑백 정지 영상의 시기 하중 DCT 부호화)

  • 황재정;양근호;이문호
    • Journal of the Korean Institute of Telematics and Electronics B
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    • v.29B no.11
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    • pp.93-101
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    • 1992
  • HVS based transform coding techniques for still images take the lowest spatial frequency and luminance contrast sensitivity as the most crucial factors in determining the image quality perceived by human eye. Only the frequency weighting has been main issue. The proposed Weighted Discrete Cosine Transform (WDCT) has the lowest frequency of about 4 [cyc/deg] in 8$\times$8 subblock with the contrast-weighted DC coefficient. The error criteria have been rederived to adapt the contrast weighting for performance evaluation. The proposed scheme has produced higher quality images compared to the unweighted and other schemes.

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Agrobacterium-Mediated Genetic Transformation of Pepper for the Development of Blight Resistant Cultivar (고추의 역병 저항성 품종 개발을 위하여 Agrobacterium tumefaciens를 이용한 elicitin 유전자 도입)

  • Kwon, Tae-Ryong;Lee, Moon-Jung;Han, Jung-Sul;Shin, Dong-Hyun;Oh, Jung-Youl;Kim, Kyung-Min;Kim, Chang-Kil
    • Journal of Plant Biotechnology
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    • v.34 no.1
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    • pp.55-59
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    • 2007
  • The study was carried out to develop transformants resisting to Phyophthora blight disease in the domestic pepper cultivar Subicho. In transforming of syn600 promoter with elicitin gene using Agrobacterium (LBA4404/pBI101 syn600-syn${\alpha}$-elicitin) to cotyledons of pepper, rate of shoot formation in 'Subicho' was 11.1% in medium containing 3 mg/L zeatin and 0.05 mg/L NAA, and also 12.8% in medium containing combination of 4 mg/L zeatin and 0.05 mg/L MAA. For PCR reaction using elicitin gene primer of transformants regenerated from cotyledons, we detected a specific band of 536 bp, and also showed strong signal at position of 536 bp in accordance with NPTII gene used as probe in Southern blot. Transformants pepper shown resistance to blight fungus was inoculated to seedlings of the $T_{1}\;and\;T_{2}$ transformants by concentration (density: zoo spore $10^{3}/mL$).

Augmentation of the Cytotoxic Effects of Anticancer Drugs by $(\pm)$-ar-Turmerone and Extracts of the Lithosperma and Scutellaria Roots against Human Leukemia Cell Lines (백혈병 세포주에 대한 $(\pm)$-ar-Turmerone, 자근 및 황금추출물에 의한 항암제의 세포독성 증강효과)

  • 이윤영;유관희;김삼용;안병준
    • YAKHAK HOEJI
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    • v.35 no.3
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    • pp.203-215
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    • 1991
  • Using the calorimetric [3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide] (MTT)assay, we evaluated the chemosensitivity of 8 anticancer drugs{vincristine(VCR), vinblastine(VBL), adriamycin(ADR), cisplatin(CPDD), etoposide(VP-16), cytosine arabinoside(ara-C), bleomycin (Bleo) and cyclophosphamide(CYC)} and the cytotoxicity-enhancing effects of ($\pm$)-ar-turmerone and the extracts of the crude drugs {Lithospermum eythrorhizon(LE) and Scutellaria baicalensis (SB)} on the above mentioned anticancer drugs against HL-60 and KG-1 cells among 8 anticancer drugs, VCR, VBL, ADR, and CPDD inhibited the growth of both cell lines by more than 50%, while VP-16, ara-C, Bleo, and CYC were less effective. ($\pm$)-ar-Turmerone had significant inhibitory effects against both cell lines, showing the ID$_{50}$ values of 11.730 $\mu\textrm{g}$/ml and 0.292 $\mu\textrm{g}$/ml for HL-60 and KG-1 cells. respectively. But the extracts of LE and SB roots showed no significant cytotoxic effects. According to ID$_{50}$ values, the cytotoxicities of VCR, VBL and ADR against HL-60 were enhanced two, eight and three times by mixing ($\pm$)-ar-turmerone, five, seven and three times by adding the extract of LE root, and twenty, six and three times by mixing the extract of SB root, respectively. The cytotoxicities of the above mentioned drugs against KG-1 cell were enhanced two, seven and three times by mixing ($\pm$)-ar-turmerone, two, three and three times by combining wilth the extract of LB root, and two, five and two times by adding the extract of SB root, respectively. The cytotoxicity-potentiating effects of ($\pm$)-ar-turmerone and the extracts of LE and SB roots against HL-60 cell were greater than KG-1 cell.

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Isolation, characterization, and phylogenetic position of a new sulfur-oxidizing bacterium

  • Chang, So Youn;Yoon, Joon Sik;Park, Yong Ha;Yang, Song Suk;Yoon, Seong Myeong;Lee, In Hwa;Kim, Si Wouk
    • Journal of Microbiology
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    • v.35 no.3
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    • pp.165-171
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    • 1997
  • A sulfer-oxidizing bacterium was isolated from mine wastewater and characterized. The isolate was gra-negative, rod (0.2 * 1.2-1.5.mu.m), nonmotiloe, catalase positive, and oxidase prositive. The opotimal pH and temperature for growth were 7.0 and 30.deg.C. respectively. The optimum thiosulfate concentration was 70 mM and the maximum growth rate was 0.081 hr. The major ubiquinone contained in the isolate was Q-8. The cellular fatty acid composition was $C_{16 : 0}$, $C_{18 : 1}$, $C_{17cyc}$,and $C_{19cyc}$ as nonpolar fatty acids, and 3-OH C10 : 0 and 3-OH $C_{12 : 0}$ as hydroxylated fatty acids. The isolate was a facultative chemolithoautotroph which can grow autotrophically on sodium thiosulfate and sodium sulfide and which can grow heterotrophically on yeast extract. It can also grow mixotrophically on sodium thiosulfate and yeast extract. Comparison of the 16S rRNA gene sequence of the isolate with that of Thiobacillus species and Paracoccus thiocyanatus revealed that it is closely related to T. caldus which belongs to the .betha.-subclass of the class Proteobacteria. However, the isolated could not grow at extremely low pH (pH 1-3.5). On the basis of the phenotypic, chemotaxonomic and phylogenetic data, the isolate was tentatively named Thiobacillus sp. strain C.ain C.

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Cyclodextrin Production from Potato Starch with Bacillus stearothermophilus Cyclomaltodextrin Glucanotransferase (Bacillus stearothermophilus의 Cyclomaltodextrin Glucanotransferase를 이용한 감자전분으로부터의 Cyclodextrin 생산)

  • 황진봉;김승호
    • Microbiology and Biotechnology Letters
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    • v.20 no.3
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    • pp.344-347
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    • 1992
  • Simultaneous liquefaction and cyclodextrin (CD) production were conducted on potato starch using cyclomaltodextrin glucanotransferase (CGTase) from a mutant strain MNNG 8 of Bacillus stearothermophilus No. 239. A high concentration (30%) of potato starch was converted to cyc1o-dextrins (CDs) with 29% yield in the conditions of pH 6.0, temperature $80^{\circ}C$, 4.3 mM $CaCl_2$, CGTase addition of 3.0 dextrinizing activity unit (DAU) at $40^{\circ}C$/g starch.

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Construction of a Secretory Expression Vector Producing an $\alpha$-Amylase of Yeast, Schwanniomyces occidentalis in Saccharomyces

  • Shin, Dong-Jun;Park, Jong-Chun;Lee, Hwanghee-Blaise;Chun, Soon-Bai;Bai, Suk
    • Journal of Microbiology and Biotechnology
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    • v.8 no.6
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    • pp.625-630
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    • 1998
  • Using a modified yeast secretory expression vector, $\alpha$-amylase of Schwanniomyces occidentalis was produced from Saccharomyces cerevisiae. The expression vector contains the a-amylase gene (AMY) harboring its own promoter without the regulatory region and the adenine base at the -3 position from the ATG start codon, its own signal sequence, CYC1 transcription terminator, and SV40 enhancer. The expressed $\alpha$-amylase activity from cells carrying the plasmid was approximately 26 times higher than that from the cells harboring an unmodified plasmid. When Saccharomyces diastaticus was transformed with this modified vector, a 2.5 times higher level of amylolytic activity than that from Sch. occidentalis was observed.

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