• 대한바이러스학회지
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• 제30권1호
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• pp.71-81
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• 2000

We have determined and analyzed the full-length cDNA sequence of a coxsackievirus B3 (CVB3) Korean isolate (CVB3-Korea/97) which has been known as a general human pathogen. The whole genome contains 7,400 nucleotides and has a single large open reading frame with 6,555 nucleotides that encodes a potential polyprotein precursor of 2,185 amino acids. The genome also contains a 5' non-coding region (NCR) of 741 bases and a 3' NCR of 104 bases followed by poly(A) tail. Sequence homologies of nucleotides and deduced amino acids between the CVB3-Korea/97 strain and the prototype (Nancy strain) were 81.7% and 91.5%, respectively. The genes encoding the functional proteins including viral protease and RNA dependent RNA polymerase showed higher homology than those encoding the structural proteins. We have further analyzed the sequences of 5' NCR, VP1 and VP2 of CVB3-Korea/97, which are known as cardiovirulent determining factors at the nucleotide and amino acid levels. Although the CVB 3-Korea/97 strain was isolated from an aseptic meningitis patient without cardiomyopathy, its 234th nucleotide and 165th amino acid were uracil and Asn as same as those of other cardiovirulent strains one. However, the 155th amino acid of VP1, which closely associated with cardiovirulence, was replaced with $Arg^{155}$ by single nucleotide substitution from $A^{2916}$ to $T^{2916}$. Moreover, additional amino acid substitutions were observed in the flanking region of $Asp^{155}$. Taken together, amino acid(s) substitution in VP1 may playa critical role in determining cardiovirulence of the CVB3-Korea/97 strain rather than individual nucleotide replacements in the 5' NCR and/or an amino acid substitution in VP2.

• 식물병연구
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• 제28권4호
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• pp.237-244
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• 2022

국화(Dendranthema morifolium)는 한국에서 경제적으로 중요한 화훼식물에 포함되고, 바이러스와 바이로이드 병들에 의해 경제적 피해를 받고 있다. 본 연구에서는 충청남도 예산군에서 재배된 국화 350개체를 대상으로 7종의 바이러스들과 2종의 바이로이드들(Chrysanthemum chlorotic mottle viroid, CChMVd; Chrysanthemum stunt viroid, CSVd; Cucumber mosaic virus, CMV; Chrysanthemum virus B, CVB; Chrysanthemum stem necrosis orthotospovirus, CSNV; Impatiens necrotic spot orthotospovirus, INSV; Potato virus X, PVX; Tomato aspermy virus, TAV; Tomato spotted wilt orthotospovirus, TSWV)을 검정하였다. 그 결과 2종의 바이러스들(CVB-CN-Y, TAV-CN-Y)과 2종의 바이로이드들(CChMVd-CN-Y, CSVd-CN-Y)이 검정되었다. CVBCN-Y는 6개의 국화 식물체들에서 검정되었고, TAV-CN-Y는 한개가 국화 식물체에서만 검정되었다. CChMVd-CN-Y는 97개의 국화 식물체들에서 검정되었으며, CSVd-CN-Y는 21개의 국화 식물체들에서 검정되었다. CVB-CN-Y는 CVB-GS1과 86.9% 염기서열 상동성을 보였으며, TAV-CN-Y는 3개의 분리주들(TAV-Chj, TAV-P, TAV-V)과 100% 염기서열이 일치하였다. CChMVd-CN-Y는 CChMVd-Horst와 99.5% 염기서열 상동성을 보였으며, CSVd-CN-Y는 4개의 분리주들(Au1.1, K4pop, Sagae, Tochigi)과 99.7% 염기서열 상동성을 보였다. 본 연구는 2021년 예산군에서 재배된 국화들을 대상으로 바이러스 및 바이로이드들을 검정하고 그들의 감염률에 관한 보고서이다.