• The Plant Pathology Journal
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• v.32 no.2
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• pp.95-101
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• 2016

Inheritance of resistance to Fusarium wilt (FW) disease caused by Fusarium udum was investigated in pigeonpea using four different long duration FW resistant genotypes viz., BDN-2004-1, BDN-2001-9, BWR-133 and IPA-234. Based on the $F_2$ segregation pattern, FW resistance has been reported to be governed by one dominant gene in BDN-2004-1 and BDN-2001-9, two duplicate dominant genes in BWR-133 and two dominant complimentary genes in resistance source IPA-234. Further, the efficacy of six simple sequence repeat (SSR) markers namely, ASSR-1, ASSR-23, ASSR-148, ASSR-229, ASSR-363 and ASSR-366 reported to be associated with FW resistance were also tested and concluded that markers ASSR-1, ASSR-23, ASSR-148 will be used for screening of parental genotypes in pigeonpea FW resistance breeding programs. The information on genetics of FW resistance generated from this study would be used, to introgress FW resistance into susceptible but highly adopted cultivars through marker-assisted backcross breeding and in conventional breeding programs.

• Journal of Environmental Science International
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• v.28 no.8
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• pp.645-654
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• 2019

This study was conducted in two breeding seasons in 2017 to identify nesting habits and breeding biology of barn swallows in Daejang-dong village, Bucheon city, suburban Seoul. Among the 77 barn swallow nests studied, there were 34 breeding nests -27 in the first and 12 in the second. The reuse rate of old nests was 51.6%. In addition to tile-roofed houses (20.6%), breeding nests were most common in brick houses (38.2%) and in slate-roofed houses (26.5%). Most breeding nests were in eaves (58.8%) and front doors (32.3%). The average clutch size was $4.8{\pm}0.9$ in the first and $4.3{\pm}0.5$ in the second. The breeding success rate was 75.0% in the first and 58.1% in the second, considering the hatching rate and the fledgling rate. It was found that the rainy season was affected by a lack of food. At least 27 pairs of nestling barn swallows and 127 young barn swallows successfully fledged were estimated to be 181. These results show that Daejang-dong village is an important suburban habitat of the Seoul metropolitan area, and that it can be used to verify the environmental conservation value of rice fields of in the Seoul metropolitan area.

• Korean Journal of Plant Resources
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• v.32 no.3
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• pp.244-253
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• 2019

In crop breeding program, information about genetic dissimilarity on breeding resources is very important to corroborate genealogical relationships and to predict the most heterozygotic hybrid combinations and inbred breeding. This study aimed to evaluate the genetic variation in Kenyan sunflower breeding lines based on simple sequence repeat (SSR). A total of 83 alleles were detected at 32 SSR loci. The allele number per locus ranged from 2 to 7 with an average of 2.7 alleles per locus detected from the 24 sunflower accessions and the average value of polymorphic information contents (PIC) were 0.384. A cluster analysis based on the genetic similarity coefficients was conducted and the 24 sunflower breeding resources were classified into three groups. The principal coordinates (PCoA) revealed 34% and 13.38% respectively, and 47.38% of total variation. It was found that the genetic diversity within the Kenyan sunflower breeding resources was narrower than that in other sunflower germplasm resources, suggesting the importance and feasibility of introducing elite genotypes from different origins for selection of breeding lines with broader genetic base in Kenyan sunflower breeding program.

• Journal of Ecology and Environment
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• v.43 no.3
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• pp.282-288
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• 2019

We investigated the changes in the population size and inter-specific space usage for breeding in mixed breeding sites of the great cormorant (Phalacrocorax carbo), grey heron (Ardea cinerea), great egret (Ardea alba modesta) and intermediate egret (Egretta intermedia) in Gammul-myeon, Goesan-gun, Chungcheongbuk-do, South Korea, in 2016-2017. These species bred in two adjacent habitats (site A and site B). The number of breeding pairs of all species and the size of the breeding area at site B increased in 2017. In 2017, great cormorants at site B occupied the breeding sites previously occupied by the other species in 2016, while the grey heron and great egret occupied the sites around the great cormorant breeding site. The heights of nest trees and nests of great cormorant and grey heron did not differ temporally, but these heights in site B were significantly higher than those in site A for great cormorants. For great egrets, these greatly decreased in site B in 2017. Thus, the great cormorant either moved to favourable nest sites for breeding success or selected nest sites used by the herons in the previous year. Further studies of these two possibilities are necessary.

• Development and Reproduction
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• v.27 no.2
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• pp.67-75
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• 2023

Polymeric immunoglobulin receptor (pIgR) mediates the transfer of polymeric immunoglobulin to protect organisms and is one of the most important mucosal effectors. In this study, the developmental stage- and tissue-specific expression of pIgR were observed before virus inoculation in olive flounder. pIgR was gradually expressed until the formation of immune tissue, exhibiting high expression in the late juvenile period; thereafter, pIgR expression gradually decreased and exhibited high expression in the spleen and skin. Moreover, pIgR expression after viral hemorrhagic septicemia virus infection was high in the kidney and spleen tissues at high density and low at low density. The results of this study can provide a basis for future studies on breeding density, virus expression, and immune system studies in fish.

• Asian-Australasian Journal of Animal Sciences
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• v.33 no.11
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• pp.1725-1731
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• 2020

Objective: An initial RNA-Sequencing study revealed that UDP-galactose-4-epimerase (GALE) was one of the most promising candidates for milk protein concentration in Chinese Holstein cattle. This enzyme catalyzes the interconversion of UDP-galactose and UDP-glucose, an important step in galactose catabolism. To further validate the genetic effect of GALE on milk protein traits, genetic variations were identified, and genotypes-phenotypes associations were performed. Methods: The entire coding region and the 5'-regulatory region (5'-UTR) of GALE were re-sequenced using pooled DNA of 17 unrelated sires. Association studies for five milk production traits were performed using a mixed linear animal model with a population encompassing 1,027 Chinese Holstein cows. Results: A total of three variants in GALE were identified, including two novel variants (g.2114 A>G and g.2037 G>A) in the 5'-UTR and one previously reported variant (g.3836 G>C) in an intron. All three single nucleotide polymorphisms (SNPs) were associated with milk yield (p<0.0001), fat yield (p = 0.0006 to <0.0001), protein yield (p = 0.0232 to <0.0001) and protein percentage (p<0.0001), while no significant associations were detected between the SNPs and fat percentage. A strong linkage disequilibrium (D' = 0.96 to 1.00) was observed among all three SNPs, and a 5 Kb haplotype block involving three main haplotypes with GAG, AGC, and AGG was formed. The results of haplotype association analyses were consistent with the results of single locus association analysis (p<0.0001). The phenotypic variance ratio above 3.00% was observed for milk protein yield that was explained by SNP-g.3836G >C. Conclusion: Overall, our findings provided new insights into the polymorphic variations in bovine GALE gene and their associations with milk protein concentration. The data indicate their potential uses for marker-assisted breeding or genetic selection schemes.

• Animal Bioscience
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• v.36 no.6
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• pp.861-868
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• 2023

Objective: Loin muscle area (LMA) is an important target trait of pig breeding. This study aimed to identify single nucleotide polymorphisms (SNPs) and genes associated with LMA in the Duroc×(Landrace×Yorkshire) crossbred pigs (DLY). Methods: A genome-wide association study was performed using the Illumina 50K chip to map the genetic marker and genes associated with LMA in 511 DLY pigs (255 boars and 256 sows). Results: After quality control, we detected 35,426 SNPs, including six SNPs significantly associated with LMA in pigs, with MARC0094338 and ASGA0072817 being the two key SNPs responsible for 1.77% and 2.48% of the phenotypic variance of LMA, respectively. Based on previous research, we determined two candidate genes (growth hormone receptor [GHR] and 3-oxoacid Co A-transferase 1 [OXCT1]) that are associated with fat deposition and muscle growth and found further additional genes (MYOCD, ARHGAP44, ELAC2, MAP2K4, FBXO4, FBLL1, RARS1, SLIT3, and RANK3) that are presumed to have an effect on LMA. Conclusion: This study contributes to the identification of the mutation that underlies quantitative trait loci associated with LMA and to future pig breeding programs based on marker-assisted selection. Further studies are needed to elucidate the role of the identified candidate genes in the physiological processes involved in LMA regulation.

• Journal of Ecology and Environment
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• v.38 no.4
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• pp.415-424
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• 2015

This research was conducted to reveal the characteristics of breeding ecology of oriental scops owl (Otus sunia stictonotus) inhabiting in South Korea according to the nest types during the breeding season from march to October for two years (2011 and 2012). Oriental scops owl nested in woodpecker's nest holes (46.1%), natural tree holes (38.5%), and artificial wood boxes (15.4%). These nests were located on following trees: Zelkova serrata, Paulownia coreana, Celtis sinensis, Salix chaenomeloides, Salix babylonica, Fraxinus rhynchophylla, Robinia pseudoacacia and Platanus occidentalis. The hatching success was 91.4%, fledging success was 83.0%, and breeding success was 75.9%. The factors of the breeding failure were falling (57.1%), abandonment (28.6%), hatching failure (7.1%), and others with unknown cause of death (7.1%). According to nest types, the fledging success (69.2%) of woodpecker's nest holes were low and the hatching success (79.2%) of natural tree holes were also low due to hatching failure and abandonment. However, hatching success, fledging success, breeding success were high in the artificial nests as all the eggs hatched and succeeded in fledging. Therefore, we suggested that artificial nests can cover the weaknesses of natural nests as well as increasing the breeding success. However, long-term research on installation place, height, and hole sizes of the artificial nest are required in order to clearly reveal the effects on the breeding success of oriental scops owl.

• Asian-Australasian Journal of Animal Sciences
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• v.21 no.7
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• pp.954-960
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• 2008

MiRNAs (microRNAs) are a class of small non-coding RNA molecules of ~21 nucleotides that down- regulate the expression of target genes at post-transcriptional level. In this study, we first accomplished a preliminary scan of miRNA expression using 65 and 90 day fetal pig skeletal muscle samples by microarray hybridization, and 34 miRNAs showed strong positive signals. Five of these miRNAs were selected for further investigation by real-time RT-PCR. The statistical analyses indicated that three miRNAs exhibited significant differential expression (p<0.05) during porcine muscle development from 65 to 90 days of gestation, e.g., miR-24 and miR-424 were down-regulated while miR-133a was up-regulated. Multi-tissue RT-PCR was performed to detect the expression patterns of the five miRNA precursors. The results showed that most of these precursor miRNAs were ubiquitously expressed in different porcine tissues.

• Korean Journal of Environmental Biology
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• v.28 no.2
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• pp.49-55
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• 2010

There are only 10,000 Saunders' Gull's (Larus saundersi Swinhoe) surviving in the world today. But they are being threatened by coastal habitat, degradation, development pressure and disturbance by humans. Their first breeding record in Korea was in 1998 and the breeding status has been studied, however, the breeding status is not sufficient for this species. This study was performed from May 1999 to June 2009 to clarify breeding populations and trend of the Saunders' Gull population in Korea. The results indicate that the breeding population has been increasing gradually from 300 to 1,300 individuals, though disturbance increased. As threats to the breeding birds, physical environmental factors such as development and human disturbance were identified as a major threatening factors. Also, as a secondary factor, eggs and chicks are falling pray to predators. Incheon bay breeding places have been created by a landfill projects for the purpose of urban and industrial development, thus, these places will no longer be available for this species. In addition, the breeding habitat has been reduced and changed by expansions of development on the ground. Therefore, well planed management schemes should be provided for the species' breeding population to be continually breed and survive.