• The Korean Journal of Malacology
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• v.24 no.2
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• pp.81-87
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• 2008

Distribution, population structure, and growth of the bivalve Protothaca euglypta were investigated for clams collected from the northwestern part of the East Sea of Russia. This species is distributed in further northern area than it was found earlier. In the southern area, this clam is found in the intertidal zone, up to 8 m in depth. It is one of the most numerous infaunal species of bivalves, and protected to wave action in the gravel-pebble and sand with rubble biotope. Population density of P. euglypta reaches 500 $spc./m^2$, and biomass 2 $kg/m^2$. Size and age composition of the local settlements and allometric growth of P. euglypta depend on a biotope. The growth rate of P. euglypta considerably reduces in case of the northern boundary area, whereas life span increases.

• Korean Journal of Ecology and Environment
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• v.45 no.1
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• pp.52-61
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• 2012

Distribution, abundance and biomass of submerged macrophytes were assessed using a double-headed rake and an echo-sounder in the Keumpoong Reservoir to investigate the temporal and spatial variations of submerged macrophytes in a small agricultural reservoir located upstream. Slope steepness and water depth in the littoral zone were important controlling factors on flora and vegetation structure of submerged macrophytes. Biodiversity of submerged macrophytes was increased at a gentle slope of the littoral zone. The results of DCA (detrended correspondence analysis) showed that the structure of submerged vegetation depended on the depth of water. Submerged macrophytes were distributed at the maximum water depth of 2.8 m in the Keumpoong Reservoir. The area occupied by the submerged macrophytes was estimated at only 6% of the total reservoir area because of the steep slope of the littoral zone and the large annual water-level fluctuation of 3.5 m. The increase of water level and inflow of turbid water in the rainy season might reduce the biomass of submerged macrophytes in the reservoir. It may be concluded that submerged vegetation in the Keumpoong Reservoir, a small agricultural reservoir located at the upstream, appears to be particularly susceptible to water level fluctuations and slope steepness of the littoral zone.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.10 no.2
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• pp.113-123
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• 2005

Samples were collected to investigate the effect of salinity change on biological interaction between primary producers and herbivores in water column of the Youngsan estuary (Mokpo Harbor) at 8 stations from October 2003 to September 2004. The highest river freshwater inputs were introduced into the estuary from the Youngsan dike during summer (June and July 2004). Ranges of salinity were between 6 and 28.9 psu when the gates of dike were open whereas the ranges were between 24.4 and 30.3 psu when the gates were closed. Algal bloom occurred in February and July when the gates were not open at the upper region of the Youngsan estuary and the bloom was dominated $(70\%)$ by large cells of phytoplankton $(micro-sized;>20{\mu}m).\;Nano-sized (2-20{\mu}m)$ and pico-sized phytoplankton $(<2{\mu}m)$ were dominant in October, November 2003, June, August and September 2004 when the gates were open suggesting that size structure was affected by river discharge from the dike. Micro-and meso-zooplankton (herbivores) displayed the similar pattern to that of phytoplankton. The biomass of zooplankton was higher when the gates were closed than when the gates open and also the biomass was higher at the upper region of the harbor system. This results suggest that freshwater inputs affect size structure and biomass of phytoplankton by changing salinity, nutrient inputs, turbidity or light level In water column resulting in the change of the interaction between primary producters and herbivores in the Youngsan estuary.

• The Korean Journal of Ecology
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• v.27 no.2
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• pp.99-106
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• 2004

We developed the estimation model for the vegetation developmental processes on the severely burned slope areas after forest fire in the east coastal region, Korea. And we calculated the vegetation indices as a useful parameter for the development of land management technique in the burned area and suggested the changes of the vegetation indices after forest fire. In order to estimate the woody standing biomass in the burned area, allometric equations of the 17 woody species regenerated by sprouter were investigated. According to the our results, twenty year after forest fire need for the development to the normal forest formed by 4 stratum structure, tree, sub-tree, shrub and herb layer. The height of top vegetation layer, basal area and standing biomass of woody species show a tendency to increase linearly, and the ground vegetation coverage and litter layer show a tendency to increase logarithmically after forest fire. Among vegetation indices, Ive and Ivcd show a tendency to increase logarithmically, and Hcl and Hcdl show a tendency to increase linearly after forest fire. The spatial variation of the most vegetation factors was observed in the developmental stages less than the first 5 years which were estimated secondary disaster by soil erosion after forest fire. Among vegetation indices, Ivc and Ivcd were the good indices for the representation of the spatial heterogeneity in the earlier developmental stages, and Hcl and Hcdl were the useful indices for the long-term estimation of the vegetation development after forest fire.

• Journal of Korean Society of Forest Science
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• v.96 no.5
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• pp.520-527
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• 2007

Biomass and species diversity of understory vegetation after fertilization were studied for 28-year-old Quercus acutissima plantation (MQA), 29-year-old Pinus densiflora plantation (MPD), 8-year-old Betula platyphylla var. japonica plantation after coal reclamation (YBP), and 4-year-old Pinus densiflora plantation after forest fire (YPD) in central Korea. Nitrogen + phosphorus + potassium (6:4:1) fertilizer was applied for 3 years from 2004. Thereafter photosynthetically active radiation (PAR) and understory species richness and diversity were measured in late July-early August 2006. PAR (${\mu}mol\;m^{-2}S^{-1}$) was higher at the fertilization treatment (100.9) than at the control (67.0) for MQA while was lower at the fertilization treatment (156.5) than at the control (268.7) for MPD. Total understory biomass (t $ha^{-1}$) was lower at the fertilization plot (1.8) than at the control plot (3.0) for YPD, however, there were no differences in biomass between fertilization and control plots for MQA, MPD and YBP. Total species number of understory vegetation was higher for fertilization than for control at MPD (47 vs. 45) and YPD (21 vs. 13), and was higher for mature plantations (33 vs. 37 for MQA and 47 vs. 45 for MPD) than for young plantations (16 vs. 16 for YBP and 21 vs. 13 for YPD). Species richness and diversity were higher at the fertilization treatment than at the control for MQA, YBP, and YPD while were lower at the fertilization treatment than at the control for MPD, however, the differences were not statistically significant. Our results indicate that there were no consistent patterns in light conditions, biomass and species richness and diversity of understory vegetation following fertilization. More detailed long-term studies with different fertilizer applications would be necessary to conclude the influence of fertilization on understory vegetation in the region.

• Journal of Microbiology and Biotechnology
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• v.22 no.4
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• pp.501-509
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• 2012

A 990 bp full-length gene (xynAHJ2) encoding a 329-residue polypeptide (XynAHJ2) with a calculated mass of 38.4 kDa was cloned from Bacillus sp. HJ2 harbored in a saline soil. XynAHJ2 showed no signal peptide, distinct amino acid stretches of glycoside hydrolase (GH) family 10 intracellular endoxylanases, and the highest amino acid sequence identity of 65.3% with the identified GH 10 intracellular mesophilic endoxylanase iM-KRICT PX1-Ps from Paenibacillus sp. HPL-001 (ACJ06666). The recombinant enzyme (rXynAHJ2) was expressed in Escherichia coli and displayed the typical characteristics of low-temperature-active enzyme (exhibiting optimum activity at $35^{\circ}C$, 62% at $20^{\circ}C$, and 38% at $10^{\circ}C$; thermolability at ${\geq}45^{\circ}C$). Compared with the reported GH 10 low-temperature-active endoxylanases, which are all extracellular, rXynAHJ2 showed low amino acid sequence identities (<45%), low homology (different phylogenetic cluster), and difference of structure (decreased amount of total accessible surface area and exposed nonpolar accessible surface area). Compared with the reported GH 10 intracellular endoxylanases, which are all mesophilic and thermophilic, rXynAHJ2 has decreased numbers of arginine residues and salt bridges, and showed resistance to $Ni^{2+}$, $Ca^{2+}$, or EDTA at 10 mM final concentration. The above mechanism of structural adaptation for low-temperature activity of intracellular endoxylanase rXynAHJ2 is different from that of GH 10 extracellular low-temperature-active endoxylanases. This is the first report of the molecular and biochemical characterizations of a novel intracellular low-temperature-active xylanase.

• Ocean and Polar Research
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• v.38 no.2
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• pp.115-128
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• 2016

This study examined the relationship between macrobenthic distribution patterns and environmental factors in salt marsh vegetation in Donggeomdo, Ganghwa on the west coast of Korea. Nine stations were fixed on a transect across the salt marsh vegetation, and field sampling was carried out monthly from July 1997 to June 1998. A total of 38 species of macrobenthos were recorded: each of faunal groups, 13 (34.2%) Arthropoda, 12 (31.6%) Polychaeta, 8 (21.1%) Mollusca, and 5 (13.2%) others. The mean density was $2,659individuals/m^2$, with a mean biomass of $178.6gWWt/m^2$. Mollusca dominated in terms of abundance and biomass, with a mean density of $2,172individuals/m^2$ (81.7%) and a mean biomass of $131.9gWWt/m^2$ (73.9%). The number of species decreased in winter (January-February), while mean density increased in the spring (May-June). The biomass was relatively in Summer and Fall (July-November), than any other season. The number of species was high in pure stands of Suaeda japonica in the lower salt marsh vegetation, and the mean density and biomass were high in mixed halophyte communities in the middle salt marsh vegetation. Two Mollusca, the bivalve Glauconome chinensis and gastropod Assiminea lutea, were dominant. The densities of these two species were high in mixed halophyte communities in the middle salt marsh vegetation. Non-metric multi-dimensional scaling (nMDS) showed that the study area could be divided into four groups corresponding to the vertical distribution of tidal levels and halophytes. Spearman's rank correlation revealed that the distribution patterns and community structure of macrobenthos were related to environment variables such as salinity of the substrates, exposure time, and grain size compositions of the sediment in the salt marsh vegetation. Particularly, the distribution and density of some dominant species showed differences along the vertical distributions of halophytes.

• Journal of the Korean Society of Marine Environment & Safety
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• v.24 no.6
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• pp.750-763
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• 2018

This study conducted 10 sampling sites survey 4 times to determine the trophic structure and energy flow of marine ecosystems for Uljin marine ranching area, Korean East Sea from March to October 2013. Based on the ecological characteristics of biological species, one used the non-Metric Multidimensional Scaling method based on the similarity of species. A total of 19 classified species groups formed categories including, top predators, seabirds, large pelagic fishes, small pelagic fishes, rockfishes, pleuronectiformes, benthic fishes, semi-benthic fishes, cephalopods, benthic feeders, epifauna, bivalves, abalone, Cnidaria, zooplankton, benthic algae, microalgae, phytoplankton and detritus. The biomass, production/biomass, consumption/biomass, diet composition data of each species groups to input data used in Ecopath mode estimated the trophic structure and energy flow of marine ecosystems in the Uljin marine ranching area. One estimated each species groups on the trophic level from 1 to 5.687. The sum of all consumption was estimated at $229.7t/km^2/yr$ and the sum of all exports was as estimated $3,432.4t/km^2/yr$. Total system throughput was at $6,796.2t/km^2/yr$, and the sum of all production was estimated at $3,613.1t/km^2/yr$. Net system production according to these results was estimated at $3,490.3t/km^2/yr$ and total biomass (excluding detritus) was estimated at $167.3t/km^2/yr$ in the Uljin marine ranching area.

• Journal of the korean society of oceanography
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• v.34 no.2
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• pp.95-112
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• 1999

To investigate a phytoplankton community structure and its biomass distribution in the Korea Strait, phytoplankton pigments were quantitatively measured by HPLC method, with hydro-graphic conditions in August and October, 1996. The measured chi. a concentrations were in the range of 7.1-1,280.7 ng/1. Horizontal distribution pattern of chi. a in summer (August) was very different from that of autumn (October). High concentration of chi. a occurred near the coast with relatively low salinity (< 33%). Vertically, the highest concentrations of pigments at most of the stations were found near the surface and above the thermocline. The maximum concentration of chi. a in October was four times higher than in August. It was notable to measure relatively high concentration of chi. b up to 190.8 ng/1 in the study area, since chi. bcontaining green algae and prochlophytes have been ignored because of their minute size and sensitivity to common preservatives. Major carotenoids detected were fucoxanthin, zeaxanthin, 19'-hexanoyloxyfucoxanthin, and prasinoxanthin. Diatoms were the dominant group with secondary important groups as pryrnnesiophytes and cyanobacteria for the biomass of phytoplankton for both cruises. The dominant species of diatoms in summer were Thalassiosira sp. and Chaetoceros peruvianus. As minor groups, prasinophytes, crysophytes, and cryptophytes were confirmed by their marker pigments and dinoflgellates by microscopical observation. Degradation products of chi. a was minor. Interestingly, at 200 m depth of St A4, the deepest station in the western channel of the Korea Strait, substantial amounts of chi. a including fucoxanthin, 19'-hexanoyloxyfucoxanthin, chi. b, and degradation products of chi. a was measured from both cruises. Higher concentration (2-3 times) of those pigments were detected from samples in summer than in autumn. Small decrease in concentration of phosphate at this depth of St. A4 was also observed. It suggested that this bottom cold water was transported from the subsurface water with biomass of active phytoplankton, which was sunk and flowed southward.

• Carbon letters
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• v.22
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• pp.81-88
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• 2017

In the present study, biomass-based lignin was extracted from industrial waste black liquor and the extracted lignin was characterized by means of attenuated total reflectance-Fourier transform infrared spectroscopy and $^1H-nuclear$ magnetic resonance spectroscopy. The extracted lignin was carbonized at different temperatures and then activated with steam at $850^{\circ}C$. The extracted lignin in powder state was transformed into a bulky carbonized lignin due to possible fusion between the lignin particles occurring upon carbonization. The carbonized and then pulverized lignin exhibits brittle surfaces, the increased thermal stability, and the carbon assay with increasing the carbonization temperature. The scanning electron microscopic images and the Brunauer-Emmett-Teller result indicate that the steam-activated carbon has the specific surface area of $1718m^2/g$, which is markedly greater than the carbonized lignin. This study reveals that biomass-based activated carbon with highly porous structure can be produced from costless black liquor via steam-activation process.