• Proceedings of the Korean Information Science Society Conference
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• 2003.04c
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• pp.407-409
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• 2003

최근 바이오인포메틱스 분야는 IT의 발전과 더불어 급속한 발전을 이루어 왔다. 또한 기존의 분자생물학분야의 연구들을 컴퓨터의 첨단 기술을 이용하여 자동화, 전산화하는 것으로 생명정보의 데이터베이스 구축을 시작으로 서열정보의 주석처리 둥이 발전되어 왔다. 또한 분자생물학의 오랜 연구결과들 중 수많은 문헌들을 토대로 한 분석인 텍스트마이닝, 정보추출은 전산학의 방법으로 데이터를 추출, 수집하여 분자생물학 데이터의 양적 팽창을 더욱 가속화하고 있다. 본 논문에서는 수집된 biological Pathway 정보의 효율적인 저장, 재사용 그리고 활용을 위해 바이오 온톨로지 기반의 XML DB를 설계하고자 한다. XML 스키마를 이용해 표현한 온톨로지를 기반으로 다양한 포맷의 생물학 데이터를 수집하고 수집된 데이터들로 XML DB를 구축한 후 Biological Pathway 정보 표현과 재사용. 나아가 생명정보학 응용분야에 활용하려 한다.

• Journal of information and communication convergence engineering
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• v.17 no.1
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• pp.49-59
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• 2019

Biosensors, which are analysis devices used to convert biological reactions into electric signals, are made up of a receptor component and a signal transduction part. Graphene quantum dots (GQDs) and carbon quantum dots (CQDs) are new types of carbon nanoparticles that have drawn a significant amount of attention in nanoparticle research. The unique features exhibited by GQDs and CQDs are their excellent fluorescence, biocompatibility, and low cytotoxicity. As a result of these features, carbon nanomaterials have been extensively studied in bioengineering, including biosensing and bioimaging. It is extremely important to find biomaterials that participate in biological processes. Biomaterials have been studied in the development of fluorescence-based detection methods. This review provides an overview of recent advances and new trends in the area of biosensors based on GQDs and CQDs as biosensor platforms for the detection of biomaterials using fluorescence. The sensing methods are classified based on the types of biomaterials, including nucleic acids, vitamins, amino acids, and glucose.

• Journal of Species Research
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• v.11 no.1
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• pp.47-60
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• 2022

This study is based on crane fly specimens collected during more than 80 years, from 1937 through 2019, and are in collections maintained at the United States National Museum, Smithsonian Institution, Washington DC, USA; at Korea University collection, Seoul, South Korea, and the National Institute of Biological Resources, Incheon, South Korea. Three species belonging to genus Phylidorea Bigot, 1854 originally were described from North Korea and in total four species were known from the Peninsula. Phylidorea (Phylidorea) multidentata (Alexander, 1938) is a Korean endemic. We are adding P. (P.) melanommata (Alexander, 1921) to the list of Korean species, which was previously recorded from Japan and Far East of Russia. We present general information on genus and subgenera, redescriptions of species based on Korean specimens, illustrations of both sexes, elevation range, period of activity, habitat information, general distribution, and a distribution map for the Korean Peninsula (including North Korea) for each species.

• Proceedings of the Korean Institute of Intelligent Systems Conference
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• 2003.09a
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• pp.11-15
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• 2003

Amount of biological data information has been increasing exponentially. In order to cope with this bio-information explosion, it is necessary to construct a biological data information integration system. The integration system could provide useful services for bio-application developers by answering general complex queries that require accessing information from heterogeneous bio data sources, and easily accommodate a new database into the integrated systems. In this paper, we analyze architectures and mechanisms of existing integration systems with their advantages and disadvantages. Based on this analysis and user requirement studies, we propose an integration system framework that embraces advantages of the existing systems. More specifically, we propose an integration system architecture composed of a mediator and wrappers, which can offer a service interface layer for various other applications as well as independent biologists, thus playing the role of database management system for biology applications. In other words, the system can help abstract the heterogeneous information structures and formats from the application layer. In the system, the wrappers send database-specific queries and report the result to the mediator using XML. The proposed system could facilitate in silico knowledge discovery by allowing combination of numerous discrete biological information databases.

• Journal of Korean Society of Environmental Engineers
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• v.28 no.10
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• pp.1082-1089
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• 2006

This study describes a methodology to develop a environmental and geographical information system for managing a national scale which is supports the environmental fate modeling. This system was developed via the integration of environmental and geographical information database(DB) and the DB usage software. For the sound environmental management, the DB were constructed by extracting the geometrical figures-such as points, polylines, and/or polygons-based on the geographical information previously developed in Korea. Then it was connected with the environmental information. Based on the Visual Basic Complier, the software can be a useful tool for visualizing the DB, for searching the environmental & geographical information, and supporting the environmental fate modeling.

• Interdisciplinary Bio Central
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• v.2 no.4
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• pp.11.1-11.8
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• 2010

Indonesia is a mega-biodiversity country having at least one trillion US Dollars value of biological resources per year over the next 20 years. Indonesia is home to 11 percent of the world's flowering plant species and 12 percent of all mammals. Many of Indonesia's species and more than half of the archipelago's endemic plant species are found nowhere else on the Earth. This information is just a small portion of all higher plants and animals being found in Indonesia. Former studies described that total number of species in Indonesia is estimated more than 1,000,000 and most of them remain unknown scientifically. Most of lower plants and animals have not been studied yet, so that greatest portion of Indonesia's biological resources has never been assessed with respect to its economic value or conservation status. Many developed countries are building cooperation with Indonesia on resources, mainly in the fields of grant aid, socio-economic services, R & D, researcher exchange, technology transfer, infrastructure, education/training, finance, etc. Indonesia will obtain greater benefits and management of its biological richness via increasing its international capacity to add value and information to its biological diversity. These goals can be achieved by close international collaboration on search of important biological resources and other bioactive products that have potential economic values. Development of biological resource-based technology stands as the industry of the $21^{st}$ century and, therefore, Indonesia has a unique opportunity to lead the process in the world.

• Journal of information and communication convergence engineering
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• v.1 no.3
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• pp.104-108
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• 2003

A biologically inspired fuzzy multilayer perceptron is proposed in this paper. The proposed algorithm is established under consideration of biological neuronal structure as well as fuzzy logic operation. We applied this suggested learning algorithm to benchmark problem in neural network such as exclusive OR and 3-bit parity, and to digit image recognition problems. For the comparison between the existing and proposed neural networks, the convergence speed is measured. The result of our simulation indicates that the convergence speed of the proposed learning algorithm is much faster than that of conventional backpropagation algorithm. Furthermore, in the image recognition task, the recognition rate of our learning algorithm is higher than of conventional backpropagation algorithm.

• Journal of Information Processing Systems
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• v.11 no.2
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• pp.280-294
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• 2015

This paper presents the infectious watermarking model (IWM) for the protection of video contents that are based on biological virus modeling by the infectious route and procedure. Our infectious watermarking is designed as a new paradigm protection for video contents, regarding the hidden watermark for video protection as an infectious virus, video content as host, and codec as contagion medium. We used pathogen, mutant, and contagion as the infectious watermark and defined the techniques of infectious watermark generation and authentication, kernel-based infectious watermarking, and content-based infectious watermarking. We experimented with our watermarking model by using existing watermarking methods as kernel-based infectious watermarking and content-based infectious watermarking medium, and verified the practical applications of our model based on these experiments.

• Genomics & Informatics
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• v.7 no.2
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• pp.111-121
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• 2009

Cell membrane proteins play crucial roles in the cell's molecular interaction with its environment and within itself. They consist of membrane-bound proteins and many types of transmembrane (TM) proteins such as receptors, transporters, channel proteins, and enzymes. Membrane proteomes of cellular organisms reveal some characteristics in their global topological distribution according to their evolutionary positions, and show their own information transfer complexity. Predicted transmembrane segments (TMSs) in membrane proteomes with HMMTOP showed near power-law distribution and frequency characteristics in 6-TMS and 7-TMS proteins in prokaryotes and eukaryotes, respectively. This reaffirms the important roles of membrane receptors in cellular communication and biological evolutionary history.

• Journal of the Korea Safety Management & Science
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• v.21 no.4
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• pp.1-6
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• 2019

This study relates to acquiring biological signal without attaching directly to the user using UWB(Ultra Wide Band) radar. The collected information is the respiratory rate, heart rate, and the degree of movement during sleep, and this information is used to measure the sleep state. A breathing measurement algorithm and a sleep state detection algorithm were developed to graph the measured data. Information about the sleep state will be used as a personalized diagnosis by connecting with the medical institution and contribute to the prevention of sleep related diseases. In addition, biological signal will be linked to various sensors in the era of the 4th industrial revolution, leading to smart healthcare, which will make human life more enriching.