• Title/Summary/Keyword: Biological characters

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Wangsania, a new genus of Apiaceae endemic to Korea

  • Lee, Byoung Yoon;Lim, Jina;Hong, Jaram;Kwak, Myounghai;Hyun, Jin-Oh
    • Journal of Species Research
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    • v.6 no.1
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    • pp.51-58
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    • 2017
  • Wangsania, a new genus of Apiaceae from limestone areas and typified by W. insolens (Kitagawa) B.Y. Lee & J.O. Hyun, is described from Gangwon-do, Korea. Wangsania insolens was initially treated as Peucedanum insolens Kitagawa due to similarity with Peucedaunm cervaria, but it differs markedly in its unique morphological characters, such as rarely branched roots and a single basal leaf with 3 or -4 ternately dissected leaflets. These characters apparently represent apomorphies for Wangsania. The parsimony analysis of nuclaer ribosomal DNA ITS sequences revealed Wangsania to be not closely related to either Peucedanum or to any of 14 different tribes or clades within subfamily Apioideae.

New Records of Aspergillus allahabadii and Penicillium sizovae from Crop Field Soil in Korea

  • Tagele, Setu Bazie;Adhikari, Mahesh;Gurung, Sun Kumar;Lee, Hyun Gu;Kim, Sang Woo;Kim, Hyun Seung;Ju, Han Jun;Gwon, Byeong Heon;Kosol, San;Lee, Hyang Burm;Lee, Youn Su
    • Mycobiology
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    • v.46 no.4
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    • pp.297-304
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    • 2018
  • Two new records of Trichocomaceae, namely Aspergillus allahabadii and Penicillium sizovae, were isolated in 2016 during a survey of fungal diversity in different crop fields locations in Gyeongnam, Korea. These species were identified based on morphological characters and phylogenetic analysis using internal transcribed spacer region and ${\beta}-tubulin$-encoding gene sequence data. A. allahabadii and P. sizovae have not yet been reported in Korea. Thus, this is the first report of these species in Korea, and their descriptions as well as details of their morphological characters are presented.

Morphological multivariate analyses of Isodon excisus complex (Lamiaceae) in Korea

  • Kim, Sang-Tae;Ma, Youn-Ju
    • Korean Journal of Plant Taxonomy
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    • v.41 no.3
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    • pp.223-229
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    • 2011
  • The taxonomy of the Isodon excisus complex has been ambiguous and problematic because the morphological characters, especially characters related to the leaf distinguishing subgroups of the complex in the original descriptions, are variable. To elucidate the taxonomic structure of the I. excisus complex in Korea, 34 characters were measured from 70 OTUs representing different locations and analyzed by principal component analysis (PCA). The analysis showed that principle component axis 1, 2, 3 (PC1, PC2, PC3) represents 52.0% of the total variance and characters showing high loading values for PC1 were leaf shape, density of non-glandular hairs on the lower surface of the leaf, and characters related to the teeth of the leaf. The length of apical tooth and the angle between two widest points of the leaf were highly correlated to PC2 and PC3, respectively. Three-dimensional scatter plotting of OTUs for PC1, PC2, and PC3 axis showed that the areas of previously recognized three subgroups of I. excisus completely overlapped. Our result supported that just one taxon, I. excisus var. excisus, should be recognized in the complex at the variety level.

Occurrence of a Natural Hybrid between Acheilognathus signifer and A. lanceolatus (Pisces: Cyprinidae) (묵납자루 Acheilognathus signifer와 납자루 A. lanceolatus 사이의 자연 잡종 출현)

  • Kim, Hyeong Su;Yun, Seung Woon;Kim, Hyun Tae;Park, Jong Young
    • Korean Journal of Ichthyology
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    • v.27 no.3
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    • pp.199-204
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    • 2015
  • A natural hybrid between Acheilognathus signifer and A. lanceolatus was collected in their sympatric area, the Gimhwanamdaecheon of Hangang (River), Korea. Morphological characters, mitochondrial cytochrome b gene (cyt b), and recombination-activating gene 1 (RAG-1) were investigated to confirm the natural hybrid origin. As a result of morphological characters, the natural hybrid was appeared to have intermediate characters between two parental species in three characters; the band of dorsal fin, the color patterns of anal fin membrane, and the body color. In analysis of cyt b, it was revealed that the maternal species of the natural hybrid was appeared to be A. signifer due to their 99.9% sequence identity. Also, in analysis of RAG-1, an electropherogram of the hybrid individual displayed double peaks, strongly indicating its hybrid state.

Sequence Validation for the Identification of the White-Rot Fungi Bjerkandera in Public Sequence Databases

  • Jung, Paul Eunil;Fong, Jonathan J.;Park, Myung Soo;Oh, Seung-Yoon;Kim, Changmu;Lim, Young Woon
    • Journal of Microbiology and Biotechnology
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    • v.24 no.10
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    • pp.1301-1307
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    • 2014
  • White-rot fungi of the genus Bjerkandera are cosmopolitan and have shown potential for industrial application and bioremediation. When distinguishing morphological characters are no longer present (e.g., cultures or dried specimen fragments), characterizing true sequences of Bjerkandera is crucial for accurate identification and application of the species. To build a framework for molecular identification of Bjerkandera, we carefully identified specimens of B. adusta and B. fumosa from Korea based on morphological characters, followed by sequencing the internal transcribed spacer region and 28S nuclear ribosomal large subunit. The phylogenetic analysis of Korean Bjerkandera specimens showed clear genetic differentiation between the two species. Using this phylogeny as a framework, we examined the identification accuracy of sequences available in GenBank. Analyses revealed that many Bjerkandera sequences in the database are either misidentified or unidentified. This study provides robust reference sequences for sequence-based identification of Bjerkandera, and further demonstrates the presence and dangers of incorrect sequences in GenBank.

Phylogenetic Relationships of the Aphyllophorales Inferred from Sequence analysis of Nuclear Small Subunit Ribosomal DNA

  • Kim, Seon-Young;Jung, Hack-Sung
    • Journal of Microbiology
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    • v.38 no.3
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    • pp.122-131
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    • 2000
  • Phylogenetic classification of the Aphyllophorales was conducted based on the analysis of nuclear small subunit ribosomal RNA (nuc SSU rDNA) sequence. Based on phylogenetic groupings and taxonomic characters, 16 families were recognized and discussed. Although many of the characters had more or less homoplasies, miroscopic characters such ad the mitic system and clamp, spore amyloidity and rot type appeared to be important in the classification of the Aphyllophorales. Phylogenetically significant families were newly defined to improve the classification of the order Aphyllophorales.

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Four New Species of the Genus Hyattella (Dictyoceratida: Spongiidae) from Korea

  • Sim, Chung Ja;Lee, Kyung Jin
    • Animal Systematics, Evolution and Diversity
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    • v.30 no.1
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    • pp.16-21
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    • 2014
  • Four new species of the genus Hyattella (Dictyoceratida: Spongiidae); H. sinchangensis n. sp., H. mara n. sp., H. chuja n. sp. and H. lendenfeldi n. sp., were collected from Jeollanam-do and Jeju-do, Korea. Hyattella sinchangensis n. sp., H. mara n. sp., H. chuja n. sp. and H. grobosa Lendenfeld, 1889 are very similar to each other in some characters. However, Hyattella sinchangensis n. sp. characterized by no special dermal lamella and no tertiary fibres, and more thin secondary fibres than H. globosa. Hyattella mara n. sp. is differs in having well developed dermal lamella, slightly fasciculated primary fibres, and thick tertiary fibres. Hyattella chuja n. sp. differs in surface characters with a slightly elevated part, skeleton with abundant spongine, and very complex meshes. Hyattella lendenfeldi n. sp. is similar to H. tenella (Lendenfeld, 1889) in skeletal structure, thickness of primary and secondary fibres, but differs in growth form.

Molecular phylogeny of Daucus (Apiaceae): Evidence from nuclear ribosomal DNA ITS sequences

  • Lee, Byoung Yoon;Park, Chong-Wook
    • Journal of Species Research
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    • v.3 no.1
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    • pp.39-52
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    • 2014
  • The Apiaceae genus Daucus consists of approximately 25 species (including carrots) which are characterized by the presence of bracts in pedunculate umbels, dorsally compressed mericarps, hairs on primary ridges, and uniseriately arranged spines on the secondary ridges of the fruit. Taxonomically, Daucus has been considered to be one of the most problematic genera in the Apiaceae due to the highly variable fruit morphology. Despite taxonomic controversy and economic importance of the genus, no rigorously constructed estimate of phylogenetic relationships exists. To examine generic limit and relationships among species of Daucus and its putatively related taxa, phylogenetic analyses of characters derived from nuclear ribosomal DNA ITS sequences were conducted. Two major clades emerged within Daucus, but neither of them have been previously recognized using morphological characters. The phylogeny also provides taxonomic status of recently reported new species of Daucus, D. arcanus and D. conchitae.

Phytolith Morphology of Leaf Epidermal Cells of Oryza L.

  • Whang, Sung-Soo;Kim, Kyung-Sik;Hess, W.M.;Sun, Byung-Yun
    • Journal of Plant Biology
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    • v.39 no.4
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    • pp.237-242
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    • 1996
  • Epidermal leaf cell phytoliths of 17 species of Oryza were examined with backscattered electron imaging with scanning electron microscopy to determine the usefulness of phytolith morphology for systematic studies. Many kinds of identifiable phytolith morphology are observed in the leaf blades of Oryza. They are different among species as well as between adaxial and abaxial surface and costal and intercostal strip portions of leaf blades. Distinguishing phytolith characters are useful at the level of the section, such as Angustifoliae, Ridleyanae, and Granulatae. The results of a cluster analysis using 21 qualitative characters of phytoliths reveal many taxonomic characteristics which are compatible with current taxonomy.

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