• 식물분류학회지
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• 제46권4호
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• pp.337-347
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• 2016

Based on genetic studies and palaeoecological surveys, the main Korean mountain range, the so-called "Baekdudaegan" (BDDG), has been recently suggested to be a major glacial refugium at the Last Glacial Maximum (LGM) for the boreal and temperate flora of northeastern Asia. On the basis of its shared role as a glacial refugium, and on a series of striking similarities in floristic richness and orographic features, the BDDG would constitute a sort of "eastern counterpart" of the Southern Appalachians. Given its floristic, biogeographic, and cultural value, the BDDG merits high priority for conservation.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2022년도 추계학술대회
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• pp.69-69
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• 2022

Commelinaceae (Commelinales), consist of three subfamiles and 40 genera, are distributed in the Old and New world, except Europe. This family is commonly known as dayflower and spiderwort due to their short bloom time and a viscous stem secretion. Although, several morphological and molecular analysis were conducted, the relationships among the genera are still ambiguous. The rapid advances in next-generation sequencing (NGS) enable us to do genomic research widely. Here, we assembled 12 new plastomes of Commelinaceae including Cartonematoideae and compared with previously published data. We identified pseudogened accD and rpoA in Commelinoideae taxa. Phylogenetic analysis inferred from 78 protein-coding genes showed that Rhopalephora scaberrima was nested within Aneilema. Also, there is a need to revise the subtribal relationships in Tradescantieae. This study will contribute to define the genome structures, phylogenetic and biogeographic studies of Commelinaceae.

• 한국응용곤충학회지
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• 제39권3호
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• pp.181-191
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• 2000

국내 늦반딧불이(Pyrocoelia rufa)이 미토콘드리아 DNA중 COI 유전자 일부(403 bp)의 염기서열을 결정, 집단내 유전적 다양도, 지역적 변이, 계통유전적 관련에 대한 분석을 실시하였다. 남해, 부산, 무주, 용인 등 우리나라 4개 지역으로부터 채집된 총 26개체로부터 7개의 mtDNA haplotype을 얻었으며 이들의 변이는 0.2~1.2%이었다. 도심인 부산에서 채집한 늦반딧불이는 다른 산림 및 농업의 채집지역과 달리 하나의 haplotype으로 고정되어 있어 도시화에 따른 집단의 병목현상과 서식처 파편화가 심각했음을 보여주었다. 그러나 우리나라 최대의 반딧불이 서식처이자 보호지역으로 지정된 무주로부터 4개의 haplotype을 얻었으며 이들의 최대염기 치환율은 1.0%로 가장 높은 집단내 유전적 다양도를 나타내었다. 근해의 섬인 남해의 늦반딧불이는 상대적으로 낮은 haplotype 다양도(H=0.25)와 계통유전적으로 이질적인 haplotype(PR7)의 존재로 요약되었는데 이는 비교적 가까운 과거의 한반도 생물지리 역사 및 유전자 이동에 의해 나타난 현상으로 설명하였다. 계층적 유전분석 결과 무주-용인과 부산-남해 그룹의 형성은 역사적으로 두 그룹사이에 유전자 이동에 반한 장벽의 존재 가능성을 제시한다고 설명하였다.

• Animal Systematics, Evolution and Diversity
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• nspc5호
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• pp.29-46
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• 2005

한국동물분류학회 창립 20주년을 기념하기 위하여 진도의 무척추 동물상에 관한 공동조사가 수행되었다. 본 연구에서는 해산연체동물상을 연구하기 위해 2004년 6월 29일에서 6월 30일까지 3개 지점에서 조사를 실시하였고 그 결과 모두 37과 77종의 연체동물 종이 채집, 동정되었다. 이들 중 18과 26종은 진도지역에서 처음으로 채집, 보고되는 종이었으며, 특히 Onchidella kurodai (Taki, 1935) 검은콩갯민숭이는 한국 미기록종으로 밝혀져 이에 대한 기재와 도판을 작성하였다. 과거의 문헌기록 등을 포함하여 본 연구로부터 새롭게 기록된 종들을 종합하면 진도 및 인근 지역에서 보고된 연체동물은 현재까치 총 43과 115종이 된다. 생물지리학적 특성의 관점에서 볼 때, 진도에서 발견된 일부 복족류 종들 (Bittium craticulatum, Macroschisma dilatatum, Cantharidus japonicus, C. callichroa, Homalopoma sangarense, Crepidula onyx)은 제주지역을 포함한 한반도 남해 혹은 동해안 지역에서 이전의 연구를 통해 발견된 종들이었다. 진도지역에는 한반도 서해안 연안에 걸쳐 분포하는 연체동물의 많은 종이 서식하고 있다는 사실과 함께, 본 연구로부터 새롭게 얻어진 발견은 진도가 한반도의 남부 해안과 서부 해안 생물상이 중첩분포하고 있는 지역이라는 이전의 Kim and Kwon (1983)의 의견을 지지하는 또 하나의 증거가 된다. 향후 종합적인 생물상 연구가 수행될 경우 진도지역의 생물지리학적 특성에 관련된 새로운 정보는 물론. 보다 다양한 동물상이 추가될 것으로 기대된다.

• ALGAE
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• 제30권1호
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• pp.15-33
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• 2015

When the generitype Centroceras clavulatum, a presumed cosmopolitan warm temperate to tropical red alga, was discovered to have a biogeographic distribution limited to the Pacific Ocean using molecular and morphological evidence, the taxonomy in the genus Centroceras was thrown into chaos worldwide. An analysis of what species was, or were, previously identified as C. clavulatum in Bermuda is the focus of the present molecular (COI-5P, rbcL) and morphological study. Two novel species are proposed, C. arcii sp. nov. and C. illaqueans sp. nov., and the distributions of three taxa recently segregated in the 'C. clavulatum complex' of the western Atlantic, C. gasparrinii, C. hyalacanthum, and C. micracanthum, have been expanded to include Bermuda. C. arcii is shown to be morphologically cryptic with C. micracanthum, and remains best distinguished by its COI-5P barcode sequence.

• ALGAE
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• 제31권2호
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• pp.91-103
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• 2016

A goal of phylogeography is to relate phylogenetic patterns to potential historic and contemporary geographic isolating events. Genetic breaks found in phylogeographic studies may denote boundaries between more generally applicable biogeographic regions. We investigated the distribution of Lessonia variegata, an important habitat forming alga, found on most rocky shores around New Zealand’s main islands, plus related species from surrounding waters. L. variegata has been shown to consist of four distinct cryptic species. Our aim was to compare the distribution of L. variegata with proposed bioregions; and to develop phylogeographic hypotheses to explain its present day distribution. Both a mitochondrial (atp8-sp) and plastid (RuBisCo spacer) marker, with different mutation rates, were used to gain information of the phylogenetic history of Lessonia. The data revealed high phylogeographic structuring and reciprocal endemism for all L. variegata cryptic species. One species (L. variegata / N) is confined to the northern part of the North Island of New Zealand; L. variegata / W is found at the southeast of the North Island and the northern South Island; L. variegata / K is endemic to the northeast South Island; and L. variegata / S is restricted to the southern part of the South Island. No overlapping areas of L. variegata species distribution were found. The data showed that genetic breaks in Lessonia do mostly correlate to bioregions, and highlight the importance of Cape Campbell at the northeast of the South Island and East Cape in the North Island, well known phylogeographic breaks, as a barrier between adjacent species.

• Animal Systematics, Evolution and Diversity
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• 제6권2호
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• pp.235-250
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• 1990

대만산 혹무늬톡토기과(Neanuridae) 6속 8종에 대한 관찰결과 5신종, 2대만미기록종이 밝혀져 이를 보고 하고자 한다. 본 연구로 밝혀진 5신종은 Neanura kentiongensis n. sp. Womersleya formosana n. sp.,Crossodonthina montana n. sp., Vitronura tubercula n. sp., Lobella nana n. sp.이고, 2대만 미기록족은 Pseudachor-udina nepalica Yosii, 1966와 Lobella perfusa Denis, 1934이다. 따라서 본 연구결과를 포함한 대만산 혹무늬톡토기과는 모두 7속 13종이된다.. 아울러 인접 국가인 일본, 배트남에 분포하는 종과의 지로적 근연관계도 살포보았다.

• Animal Systematics, Evolution and Diversity
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• 제37권4호
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• pp.273-279
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• 2021

Branchinotogluma segonzaci (Miura and Desbruyères, 1995) occurs in hydrothermal vent fields of the southwestern Pacific Ocean. We morphologically compared B. segonzaci from the North Fiji Basin with the original description from the Lau Basin and a subsequent study of specimens from the Manus Basin. The main characteristics of all B. segonzaci populations were similar having 21 segments, 10 pairs of elytra, cylindrical-shaped anterior lobes, and ventral papillae on segment 12 and ventral lamellae on segments 13-17 in males. However, the specimens from the North Fiji Basin had rounded to sub-renifrom elytra rather than oval in the original description. Additionally, we newly obtained 11 cytochrome oxidase subunit I (COI) DNA barcodes from the North Fiji Basin and Tonga Arc populations and compared them with known COI DNA barcodes of Branchinotogluma species. Thirteen sequences of B. segonzaci showed 0.0-1.07% intraspecific variation and formed two clades in the COI neighbor-joining tree, whereas the interspecific variation among Branchinotogluma species was 8.19-22.4%. The results of this study contribute to biogeographic studies of B. segonzaci and the evolution of polynoid scale worms in chemosynthesis-based ecosystems.

• ALGAE
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• 제34권2호
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• pp.91-97
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• 2019

Chilean species of marine macroalgae with amphitropical distributions oftentimes result from introductions out of the Northern Hemisphere. This possibility was investigated using haplotype data in an amphitropical red macroalgae present in Chile, Callophyllis variegata. Published sequence records from Canada and the United States were supplemented with new collections from Chile (April 2014-November 2015). Specimens of C. variegata were amplified for the 5′ end of the cytochrome c oxidase subunit I gene (COI-5P) and the full length nuclear internal transcribed spacer region. Haplotype networks and biogeographic distributions were used to infer whether C. variegata was introduced between hemispheres, and several population parameters were estimated using IMa2 analyses. C. variegata displayed a natural amphitropical distribution, with an isolation time of approximately 938 ka between hemispheres. It is hypothesized that contemporary populations of C. variegata were established from a refugial population during the late Pleistocene, and may have crossed the tropics via rafting on buoyant species of kelp or along deep-water refugia coincident with global cooling, representing a rare case of a non-human mediated amphitropical distribution.

• Mycobiology
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• 제49권6호
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• pp.559-581
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• 2021

The coastal marine ecosystems of Vietnam are one of the global biodiversity hotspots, but the biodiversity of marine fungi is not well known. To fill this major gap of knowledge, we assessed the genetic diversity (ITS sequence) of 75 fungal strains isolated from 11 surface coastal marine and deeper waters in Nha Trang Bay and Van Phong Bay using a culture-dependent approach and 5 OTUs (Operational Taxonomic Units) of fungi in three representative sampling sites using next-generation sequencing. The results from both approaches shared similar fungal taxonomy to the most abundant phylum (Ascomycota), genera (Candida and Aspergillus) and species (Candida blankii) but were different at less common taxa. Culturable fungal strains in this study belong to 3 phyla, 5 subdivisions, 7 classes, 12 orders, 17 families, 22 genera and at least 40 species, of which 29 species have been identified and several species are likely novel. Among identified species, 12 and 28 are new records in global and Vietnamese marine areas, respectively. The analysis of enzyme activity and the checklist of trophic mode and guild assignment provided valuable additional biological information and suggested the ecological function of planktonic fungi in the marine food web. This is the largest dataset of marine fungal biodiversity on morphology, phylogeny and enzyme activity in the tropical coastal ecosystems of Vietnam and Southeast Asia. Biogeographic aspects, ecological factors and human impact may structure mycoplankton communities in such aquatic habitats.