• Title/Summary/Keyword: Bio membrane

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High-yield Expression and Characterization of Syndecan-4 Extracellular, Transmembrane and Cytoplasmic Domains

  • Choi, Sung-Sub;Kim, Ji-Sun;Song, Jooyoung;Kim, Yongae
    • Bulletin of the Korean Chemical Society
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    • v.34 no.4
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    • pp.1120-1126
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    • 2013
  • The syndecan family consists of four transmembrane heparan sulfate proteoglycans present in most cell types and each syndecan shares a common structure containing a heparan sulfate modified extracellular domain, a single transmembrane domain and a C-terminal cytoplasmic domain. To get a better understanding of the mechanism and function of syndecan-4 which is one of the syndecan family, it is crucial to investigate its three-dimensional structure. Unfortunately, it is difficult to prepare the peptide because it is membrane-bound protein that transverses the lipid bilayer of the cell membrane. Here, we optimize the expression, purification, and characterization of transmembrane, cytoplasmic and short extracellular domains of syndecan4 (syndecan-4 eTC). Syndecan-4 eTC was successfully obtained with high purity and yield from the M9 medium. The structural information of syndecan-4 eTC was investigated by MALDI-TOF mass (MS) spectrometry, circular dichroism (CD) spectroscopy, and nuclear magnetic resonance (NMR) spectroscopy. It was confirmed that syndecan-4 eTC had an ${\alpha}$-helical multimeric structure like transmembrane domain of syndecan-4 (syndecan-4 TM) in membrane environments.

Bio-degradation of Phenol in Wastewater by Enzyme-loaded Membrane Reactor: Numerical Approach

  • Barbieri, Giuseppe;Choi, Seung-Hak;Scura, Francesco;Mazzei, Rosalinda;Giorno, Lidietta;Drioli, Enrico;Kim, Jeong-Hoon
    • Membrane Journal
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    • v.19 no.1
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    • pp.72-82
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    • 2009
  • A mathematical model was written for simulating the removal of phenol from wastewater in enzyme-loaded membrane reactor (EMR). The numerical simulation program was developed so as to predict the degradation of phenol through an EMR. Numerical model proves to be effective in searching for optimal operating conditions and creating an optimal microenvironment for the biocatalyst in order to optimize productivity. In this study, several dimensionless parameters such as Thiele Modulus (${\phi}^2$, dimensionless Michaelis-Menten constant ($\xi$), Peclet number (Pe) were introduced to simplify their effects on system efficiency. In particular, the study of phenol conversion at different feed compositions shows that low phenol concentrations and high Thiele Modulus values lead to higher reactant degradation.

Monitoring of the Treatment of Leachate by Two Phase Anaerobic Membrane Process (TPAMP) (이상 혐기성 막공정에 의한 침출수 처리 모니터링)

  • Hwang, Moon H.;Hyun, Seong H.;Jang, Nam J.;Cho, Jea W.;Kim, In S.
    • Journal of Korean Society on Water Environment
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    • v.18 no.2
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    • pp.151-157
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    • 2002
  • Landfill leachate is one of highly contaminated and heterogeneous wastewater. The leachate from initial landfill can be treated by anaerobic process because it contains biodegradable matters, particularly, volatile fatty acids (VFAs). However, the anaerobic treatment of leachate is generally required longer hydraulic retention time (HRT) than aerobic process and another treatment process to satisfy effluent concentration. Therefore the modification of conventional anaerobic treatment is needed. Two phase anaerobic membrane process (TPAMP) is an integrated membrane process to be able to separate anaerobic metabolism into two phase which are acidogenesis and methanogenesis for improvement of anaerobic treatment efficiency. In this study, the efficiency of TPAMP and conventional anaerobic treatment were compared in terms of HRT, effluent SCOD, VFAs Membrane used in TPAMP was the UF of capillary type with the surface area of $0.048m^2$. The average effluent SCOD of conventional anaerobic treatment was 1352 mg/L and the removal was 96 % at HRT 60 days, while in TPAMP, 927 mg/L and 98% at HRT 30 days.

Analogs of Periplanetasin-4 Exhibit Deteriorated Membrane-Targeted Action

  • Lee, Heejeong;Hwang, Jae Sam;Lee, Dong Gun
    • Journal of Microbiology and Biotechnology
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    • v.30 no.3
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    • pp.382-390
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    • 2020
  • Periplanetasin-4 is an antimicrobial peptide with 13 amino acids identified in cockroaches. It has been reported to induce fungal cell death by apoptosis and membrane-targeted action. Analogs were designed by substituting arginine residues to modify the electrostatic and hydrophobic interactions accordingly and explore the effect of periplanetasin-4 through the increase of net charge and the decrease of hydrophobicity. The analogs showed lower activity than periplanetasin-4 against gram-positive and gram-negative bacteria. Similar to periplanetasin-4, the analogs exhibited slight hemolytic activity against human erythrocytes. Membrane studies, including determination of changes in membrane potential and permeability, and fluidity assays, revealed that the analogs disrupt less membrane integrity compared to periplanetasin-4. Likewise, when the analogs were treated to the artificial membrane model, the passage of molecules bigger than FD4 was difficult. In conclusion, arginine substitution could not maintain the membrane disruption ability of periplanetasin-4. The results indicated that the attenuation of hydrophobic interactions with the plasma membrane caused a reduction in the accumulation of the analogs on the membrane before the formation of electrostatic interactions. Our findings will assist in the further development of antimicrobial peptides for clinical use.

Proteomic Analysis of Fructophilic Properties of Osmotolerant Candida magnoliae

  • Yu, Ji-Hee;Lee, Dae-Hee;Park, Yong-Cheol;Lee, Mi-Gi;Kim, Dae-Ok;Ryu, Yeon-Woo;Seo, Jin-Ho
    • Journal of Microbiology and Biotechnology
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    • v.18 no.2
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    • pp.248-254
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    • 2008
  • Candida magnoliae, an osmotolerant and erythritol producing yeast, prefers D-fructose to D-glucose as carbon sources. For the investigation of the fructophilic characteristics with respect to sugar transportation, a sequential extraction method using various detergents and ultracentrifugation was developed to isolate cellular membrane proteins in C. magnoliae. Immunoblot analysis with the Pma1 antibody and two-dimensional electrophoresis analysis coupled with MS showed that the fraction II was enriched with membrane proteins. Eighteen proteins out of 36 spots were identified as membrane or membrane-associated proteins involved in sugar uptake, stress response, carbon metabolism, and so on. Among them, three proteins were significantly upregulated under the fructose supplying conditions. The hexose transporter was highly homologous to Ght6p in Schizosaccharomyces pombe, which was known as a predominant transporter for the fructose uptake of S. pombe because it exhibited higher affinity to D-fructose than D-glucose. The physicochemical properties of the ATP-binding cassette transporter and inorganic transporter explained their direct or indirect associations with the fructophilic behavior of C. magnoliae. The identification and characterization of membrane proteins involved in sugar uptake might contribute to the elucidation of the selective utilization of fructose to glucose by C. magnoliae at a molecular level.

Comparable efficacy of silk fibroin with the collagen membranes for guided bone regeneration in rat calvarial defects

  • Kim, Jwa-Young;Yang, Byoung-Eun;Ahn, Jin-Hee;Park, Sang O;Shim, Hye-Won
    • The Journal of Advanced Prosthodontics
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    • v.6 no.6
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    • pp.539-546
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    • 2014
  • PURPOSE. Silk fibroin (SF) is a new degradable barrier membrane for guided bone regeneration (GBR) that can reduce the risk of pathogen transmission and the high costs associated with the use of collagen membranes. This study compared the efficacy of SF membranes on GBR with collagen membranes (Bio-$Gide^{(R)}$) using a rat calvarial defect model. MATERIALS AND METHODS. Thirty-six male Sprague Dawley rats with two 5 mm-sized circular defects in the calvarial bone were prepared (n=72). The study groups were divided into a control group (no membrane) and two experimental groups (SF membrane and Bio-$Gide^{(R)}$). Each group of 24 samples was subdivided at 2, 4, and 8 weeks after implantation. New bone formation was evaluated using microcomputerized tomography and histological examination. RESULTS. Bone regeneration was observed in the SF and Bio-$Gide^{(R)}$-treated groups to a greater extent than in the control group (mean volume of new bone was $5.49{\pm}1.48mm^3$ at 8 weeks). There were different patterns of bone regeneration between the SF membrane and the Bio-$Gide^{(R)}$ samples. However, the absolute volume of new bone in the SF membrane-treated group was not significantly different from that in the collagen membrane-treated group at 8 weeks ($8.75{\pm}0.80$ vs. $8.47{\pm}0.75mm^3$, respectively, P=.592). CONCLUSION. SF membranes successfully enhanced comparable volumes of bone regeneration in calvarial bone defects compared with collagen membranes. Considering the lower cost and lesser risk of infectious transmission from animal tissue, SF membranes are a viable alternative to collagen membranes for GBR.

Multi-Dimension Scaling as an exploratory tool in the analysis of an immersed membrane bioreactor

  • Bick, A.;Yang, F.;Shandalov, S.;Raveh, A.;Oron, G.
    • Membrane and Water Treatment
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    • v.2 no.2
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    • pp.105-119
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    • 2011
  • This study presents the tests of an Immersed Membrane BioReactor (IMBR) equipped with a draft tube and focuses on the influence of hydrodynamic conditions on membrane fouling in a pilot-scale using a hollow fiber membrane module of ZW-10 under ambient conditions. In this system, the cross-flow velocities across the membrane surface were induced by a cylindrical draft-tube. The relationship between cross-flow velocity and aeration strength and the influence of the cross-flow on fouling rate (under various hydrodynamic conditions) were investigated using Multi-Dimension Scaling (MDS) analysis. MDS technique is especially suitable for samples with many variables and has relatively few observations, as the data about Membrane Bio-Reactor (MBR) often is. Observations and variables are analyzed simultaneously. According to the results, a specialized form of MDS, CoPlot enables presentation of the results in a two dimensional space and when plotting variables ratio (output/input) rather than original data the efficient units can be visualized clearly. The results indicate that: (i) aeration plays an important role in IMBR performance; (ii) implementing the MDS approach with reference to the variables ratio is consequently useful to characterize performance changes for data classification.

Membrane Module for Greenhouse CO2 Supply Removal Effect of Harmful Pathogen (Phoma sp.) (온실 CO2 공급용 Membrane Module의 유해병원균(Phoma sp.)의 제거효과)

  • Kim, Seong-Sik;Kim, Hee-Tae;Jo, Jae-Min;Cho, Won-Jun;Kim, Hyeon-Tae
    • Proceedings of the Korean Society for Agricultural Machinery Conference
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    • 2017.04a
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    • pp.33-33
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    • 2017
  • 본 연구는 온실 $CO_2$ 공급용 Membrane Module이 대기 중 $CO_2$를 포집하는 과정에서 유해병원균을 제거할 수 있는지 알아보기 위해 실험을 진행하였다. 본 실험은 Membrane Module과 유해병원균의 유무로 총 4개의 실험구, 포집하는 시간에 따라 1 min, 3 min, 5 min, 각각 3회씩, 총 36회의 실험을 진행하였다. 실험은 경상대학교 내 온실($W{\times}D{\times}H$, $3000{\times}4000{\times}2500mm$)에서 진행하였고, 유해병원균은 잎점무늬병을 일으키는 병원균(Phoma sp.)을 사용하였다. 온실에 Membrane System을 설치하고 Membrane Module을 통해 외부공기 또는 유해병원균이 포함된 공기를 분리하여 온실 내로 공급하고, 공급한 $CO_2$ 내에 유해병원균의 유무는 에어샘플러를 이용하여 온실 내의 공기를 포집 후 배지에 배양하여 확인하였다. 유해병원균은 PDA배지를 이용하여 포집한 뒤 항온항습기(HB-105SG-O, HANBAEK SCIENTIFIC CO., Korea)에 $25^{\circ}C$, 50%로 48시간 배양하였다. PDA배지 내에 배양된 미생물은 Colony Counter(HYC-560, CORETECH, Korea)로 측정하였다. 결과 값을 분석하기 위해서 IBM SPSS Statistics의 이원분산분석(two-way ANOVA)을 이용하여 통계분석 하였다. 결과 값은 유해병원균을 공급하고 Membrane Module을 사용하지 않았을 때, CFU(Colony-Forming Unit)가 가장 높았고, 유해병원균을 공급하고 Membrane Module을 사용했을 때 CFU가 가장 낮았다. 통계분석을 실시한 결과, Membrane Module을 사용하지 않은 실험구에는 유의한 차이가 나타났고, Membrane Module을 사용한 실험구에는 유의한 차이가 나타나지 않았다. 따라서 Membrane Module이 대기 중 $CO_2$를 분리하여 온실에 공급하는 과정에서 공기 중에 포함된 유해병원균을 제거 할 수 있다고 판단된다.

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Zeolite Based Pervaporation Membrane: A Review (제올라이트 기반 투과증발 분리막: 총설)

  • JooYeop, Lee;Rajkumar, Patel
    • Membrane Journal
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    • v.32 no.6
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    • pp.383-389
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    • 2022
  • Membrane separation process is an important technique utilized for various applications. This separation process proceeds due to a driving force such as concentration gradient, pressure or electrical potential gradient etc. Pervaporation is one of the separation process based on solution-diffusion mechanism. The pressure of the permeate side is reduced by creating vacuum and separation is driven due to pressure difference. Purity of the fuel or chemical like ethanol or isopropyl alcohol are improved by dehydration process through porous zeolite membrane. These membranes have high thermal, chemical, mechanical stability. This review is classified mainly into two different sections: Ethanol and bio-oil dehydration by zeolite membrane.