• Title/Summary/Keyword: Beta-Poisson model

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A Study on Dose-Response Models for Foodborne Disease Pathogens (주요 식중독 원인 미생물들에 대한 용량-반응 모델 연구)

  • Park, Myoung Su;Cho, June Ill;Lee, Soon Ho;Bahk, Gyung Jin
    • Journal of Food Hygiene and Safety
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    • v.29 no.4
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    • pp.299-304
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    • 2014
  • The dose-response models are important for the quantitative microbiological risk assessment (QMRA) because they would enable prediction of infection risk to humans from foodborne pathogens. In this study, we performed a comprehensive literature review and meta-analysis to better quantify this association. The meta-analysis applied a final selection of 193 published papers for total 43 species foodborne disease pathogens (bacteria 26, virus 9, and parasite 8 species) which were identified and classified based on the dose-response models related to QMRA studies from PubMed, ScienceDirect database and internet websites during 1980-2012. The main search keywords used the combination "food", "foodborne disease pathogen", "dose-response model", and "quantitative microbiological risk assessment". The appropriate dose-response models for Campylobacter jejuni, pathogenic E. coli O157:H7 (EHEC / EPEC / ETEC), Listeria monocytogenes, Salmonella spp., Shigella spp., Staphylococcus aureus, Vibrio parahaemolyticus, Vibrio cholera, Rota virus, and Cryptosporidium pavum were beta-poisson (${\alpha}=0.15$, ${\beta}=7.59$, fi = 0.72), beta-poisson (${\alpha}=0.49$, ${\beta}=1.81{\times}10^5$, fi = 0.67) / beta-poisson (${\alpha}=0.22$, ${\beta}=8.70{\times}10^3$, fi = 0.40) / beta-poisson (${\alpha}=0.18$, ${\beta}=8.60{\times}10^7$, fi = 0.60), exponential (r=$1.18{\times}10^{-10}$, fi = 0.14), beta-poisson (${\alpha}=0.11$, ${\beta}=6,097$, fi = 0.09), beta-poisson (${\alpha}=0.21$, ${\beta}=1,120$, fi = 0.15), exponential ($r=7.64{\times}10^{-8}$, fi = 1.00), betapoisson (${\alpha}=0.17$, ${\beta}=1.18{\times}10^5$, fi = 1.00), beta-poisson (${\alpha}=0.25$, ${\beta}=16.2$, fi = 0.57), exponential ($r=1.73{\times}10{-2}$, fi = 1.00), and exponential ($r=1.73{\times}10^{-2}$, fi = 0.17), respectively. Therefore, these results provide the preliminary data necessary for the development of foodborne pathogens QMRA.

Dose-Response Relationship of Avian Influenza Virus Based on Feeding Trials in Humans and Chickens (조류인플루엔자 바이러스의 양-반응 모형)

  • Pak, Son-Il;Lee, Jae-Yong;Jeon, Jong-Min
    • Journal of Veterinary Clinics
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    • v.28 no.1
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    • pp.101-107
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    • 2011
  • This study aimed to determine dose-response (DR) curve of avian influenza (AI) virus to predict the probability of illness or adverse health effects that may result from exposure to a pathogenic microorganism in a quantitative microbial risk assessment. To determine the parametric DR relationship of several strains of AI virus, 7 feeding trial data sets challenging humans (5 sets) and chickens (2 sets) for strains of H3N2 (4 sets), H5N1 (2 sets) and H1N1 (1 set) from the published literatures. Except for one data set (study with intra-tracheal inoculation for data set no. 6), all were obtained from the studies with intranasal inoculation. The data were analyzed using three types of DR model as the basis of heterogeneity in infectivity of AI strains in humans and chickens: exponential, beta-binomial and beta-Poisson. We fitted to the data using maximum likelihood estimation to get the parameter estimates of each model. The alpha and beta values of the beta-Poisson DR model ranged 0.06-0.19 and 1.7-48.8, respectively for H3N2 strain. Corresponding values for H5N1 ranged 0.464-0.563 and 97.3-99.4, respectively. For H1N1 the parameter values were 0.103 and 12.7, respectively. Using the exponential model, r (infectivity parameter) ranged from $1.6{\times}10^{-8}$ to $1.2{\times}10^{-5}$ for H3N2 and from $7.5{\times}10^{-3}$ to $4.0{\times}10^{-2}$ for H5N1, while the value was $1.6{\times}10^{-8}$ for H1N1. The beta-Poisson DR model provided the best fit to five of 7 data sets tested, and the estimated parameter values in betabinomial model were very close to those of beta-Poisson. Our study indicated that beta-binomial or beta-Poisson model could be the choice for DR modeling of AI, even though DR relationship varied depending on the virus strains studied, as indicated in prior studies. Further DR modeling should be conducted to quantify the differences among AI virus strains.

POISSON APPROXIMATION OF INDUCED SUBGRAPH COUNTS IN AN INHOMOGENEOUS RANDOM INTERSECTION GRAPH MODEL

  • Shang, Yilun
    • Bulletin of the Korean Mathematical Society
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    • v.56 no.5
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    • pp.1199-1210
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    • 2019
  • In this paper, we consider a class of inhomogeneous random intersection graphs by assigning random weight to each vertex and two vertices are adjacent if they choose some common elements. In the inhomogeneous random intersection graph model, vertices with larger weights are more likely to acquire many elements. We show the Poisson convergence of the number of induced copies of a fixed subgraph as the number of vertices n and the number of elements m, scaling as $m={\lfloor}{\beta}n^{\alpha}{\rfloor}$ (${\alpha},{\beta}>0$), tend to infinity.

A Review of Dose-response Models in Microbial Risk Assessment (미생물 위해성 평가의 용량-반응 모델에 대한 고찰)

  • 최은영;박경진
    • Journal of Food Hygiene and Safety
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    • v.19 no.1
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    • pp.19-24
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    • 2004
  • Dose-response models in microbial risk assessment can be divided into biologically plausible models and empirical models. Biologically plausible models are formed by the assumptions in dose distribution of microbes, host sensitivity to microbes, and minimal infectious dose of microbes : there are Exponential model and $\beta$-Poisson model, representatively. Empirical models are mainly used to express the toxicity of chemicals : there are Weibull-Gamma model etc. Deviance function (Y) is used to fit available data to dose-response models, and some dose-response models for food-borne pathogens are developed in humans and experimental animals.

Bayesian Inferences for Software Reliability Models Based on Beta-Mixture Mean Value Functions

  • Nam, Seung-Min;Kim, Ki-Woong;Cho, Sin-Sup;Yeo, In-Kwon
    • The Korean Journal of Applied Statistics
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    • v.21 no.5
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    • pp.835-843
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    • 2008
  • In this paper, we investigate a Bayesian inference for software reliability models based on mean value functions which take the form of the mixture of beta distribution functions. The posterior simulation via the Markov chain Monte Carlo approach is used to produce estimates of posterior properties. Its applicability is illustrated with two real data sets. We compute the predictive distribution and the marginal likelihood of various models to compare the performance of them. The model comparison results show that the model based on the beta-mixture performs better than other models.

A Study on the Applicability of 2-Poisson Model for Selecting Korean Subject Words (2-포아송 모형을 이용한 한글 주제어 선정에 관한 연구)

  • 정영미;최대식
    • Journal of the Korean Society for information Management
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    • v.17 no.1
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    • pp.129-148
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    • 2000
  • Experiments were performed on three subsets of a Korean test collection in order to determine whether 2-Poisson model's Z value is a good measure for selecting subject words from a document to be indexed. It was found that subject word selection based on the Z value was effective for only one subset with short texts, i.e., the Science and Technology subset. Correlation analyses between 2-Poisson model's Z and TF.IDF weight for the three subsets showed that the correlation was relatively high for two test subsets with short texts, i.e., the Science and Technology subset and the Newspaper subset.

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A Bayesian analysis based on beta-mixtures for software reliability models

  • Nam Seungmin;Kim Kiwoong;Cho Sinsup;Yeo Inkwon
    • Proceedings of the Korean Society for Quality Management Conference
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    • 2004.04a
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    • pp.430-435
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    • 2004
  • Nonhomogeneous Poisson Process is often used to model failure times which occurred in software reliability and hardware reliability models. It can be characterized by its intensity functions or mean value functions. Many parametric intensity models have been proposed to account for the failure mechanism in real situation. In this paper, we propose a Bayesian semiparametric approach based on beta-mixtures. Two real datasets are analyzed.

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A Development of Tsunami Risk Assessment Model Using a Poisson-Pareto Distribution for Earthquake Frequency and Magnitude (지진발생빈도-크기 분석을 위한 Poisson-Pareto 분포 모형과 연계한 지진해일 위험도 평가 기법 개발)

  • Kim, Kwan-Hyuck;Kwon, Hyun-Han
    • Proceedings of the Korea Water Resources Association Conference
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    • 2017.05a
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    • pp.330-330
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    • 2017
  • 최근 우리나라 주변에 잦은 지진으로 인한 재해위험도 증가 우려가 커지고 있다. 국내 외에서 지진해일 위험도 평가는 시나리오를 기준으로 수치해석을 수행하고 이들 결과를 활용하는 절차로 수행된다. 그러나 위험도 평가는 하중조건 즉, 지진해일을 발생시키는 지진의 발생빈도 및 크기를 종합적으로 고려한 확률 계산이 우선적으로 요구되나, 기존 분석 절차에서는 고려가 되지 않거나 상대적으로 간략화 되어 진행되고 있다. 이러한 점에서 본 연구에서는 과거 우리나라 주변에 지진 및 지진해일 자료, 수치해석 모형 결과를 활용하여, 지진의 규모와 발생빈도를 종합적으로 고려할 수 있는 지진해일 위험도 평가 방법을 수립하고자 한다. 본 연구에서는 첫째, 지진 위험도 평가를 위해서 Poisson-Pareto 분포를 이용하였다. 둘째, 지진발생 위치 및 크기를 고려한 지진해일 위험도 평가 모형을 개발하였다. 셋째, 지진발생 위험도 및 지진해일 위험도를 통합한 해석 모형을 개발하고자 하며, 본 연구애서 제시하는 모든 해석 절차는 매개변수의 불확실성을 고려할 수 있도록 Bayesian 해석기법을 도입하여 진행하였다.

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Comparison of Three Binomial-related Models in the Estimation of Correlations

  • Moon, Myung-Sang
    • Communications for Statistical Applications and Methods
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    • v.10 no.2
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    • pp.585-594
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    • 2003
  • It has been generally recognized that conventional binomial or Poisson model provides poor fits to the actual correlated binary data due to the extra-binomial variation. A number of generalized statistical models have been proposed to account for this additional variation. Among them, beta-binomial, correlated-binomial, and modified-binomial models are binomial-related models which are frequently used in modeling the sum of n correlated binary data. In many situations, it is reasonable to assume that n correlated binary data are exchangeable, which is a special case of correlated binary data. The sum of n exchangeable correlated binary data is modeled relatively well when the above three binomial-related models are applied. But the estimation results of correlation coefficient turn to be quite different. Hence, it is important to identify which model provides better estimates of model parameters(success probability, correlation coefficient). For this purpose, a small-scale simulation study is performed to compare the behavior of above three models.

Quantitative microbial risk assessment of Campylobacter jejuni in jerky in Korea

  • Ha, Jimyeong;Lee, Heeyoung;Kim, Sejeong;Lee, Jeeyeon;Lee, Soomin;Choi, Yukyung;Oh, Hyemin;Yoon, Yohan
    • Asian-Australasian Journal of Animal Sciences
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    • v.32 no.2
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    • pp.274-281
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    • 2019
  • Objective: The objective of this study was to estimate the risk of Campylobacter jejuni (C. jejuni) infection from various jerky products in Korea. Methods: For the exposure assessment, the prevalence and predictive models of C. jejuni in the jerky and the temperature and time of the distribution and storage were investigated. In addition, the consumption amounts and frequencies of the products were also investigated. The data for C. jejuni for the prevalence, distribution temperature, distribution time, consumption amount, and consumption frequency were fitted with the @RISK fitting program to obtain appropriate probabilistic distributions. Subsequently, the dose-response models for Campylobacter were researched in the literature. Eventually, the distributions, predictive model, and dose-response model were used to make a simulation model with @RISK to estimate the risk of C. jejuni foodborne illness from the intake of jerky. Results: Among 275 jerky samples, there were no C. jejuni positive samples, and thus, the initial contamination level was statistically predicted with the RiskUniform distribution [RiskUniform (-2, 0.48)]. To describe the changes in the C. jejuni cell counts during distribution and storage, the developed predictive models with the Weibull model (primary model) and polynomial model (secondary model) were utilized. The appropriate probabilistic distribution was the BetaGeneral distribution, and it showed that the average jerky consumption was 51.83 g/d with a frequency of 0.61%. The developed simulation model from this data series and the dose-response model (Beta Poisson model) showed that the risk of C. jejuni foodborne illness per day per person from jerky consumption was $1.56{\times}10^{-12}$. Conclusion: This result suggests that the risk of C. jejuni in jerky could be considered low in Korea.