• Title/Summary/Keyword: Beowulf cluster

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HPC(High Performance Computer) Linux Clustering for UltraSPARC(64bit-RISC processor) (UltraSPARC(64bit-RISC processor)을 위한 고성능 컴퓨터 리눅스 클러스터링)

  • 김기영;조영록;장종권
    • Proceedings of the IEEK Conference
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    • 2003.11b
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    • pp.45-48
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    • 2003
  • We can easily buy network system for high performance micro-processor, progress computer architecture is caused of high bandwidth and low delay time. Coupling PC-based commodity technology with distributed computing methodologies provides an important advance in the development of single-user dedicated systems. Lately Network is joined PC or workstation by computers of high performance and low cost. Than it make intensive that Cluster system is resembled supercomputer. Unix, Linux, BSD, NT(Windows series) can use Cluster system OS(operating system). I'm chosen linux gain low cost, high performance and open technical documentation. This paper is benchmark performance of Beowulf clustering by UltraSPARC-1K(64bit-RISC processor). Benchmark tools use MPI(Message Passing Interface) and NetPIPE. Beowulf is a class of experimental parallel workstations developed to evaluate and characterize the design space of this new operating point in price-performance.

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Development of Mongolian Numerical Weather Prediction System (MNWPS) Based on Cluster System (클러스터 기반의 몽골기상청 수치예보시스템 개발)

  • Lee, Yong Hee;Chang, Dong-Eon;Cho, Chun-Ho;Ahn, Kwang-Deuk;Chung, Hyo-Sang;Gomboluudev, P.
    • Atmosphere
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    • v.15 no.1
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    • pp.35-46
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    • 2005
  • Today, the outreach of National Meteorological Service such as PC cluster based Numerical Weather Prediction (NWP) technique is vigorous in the world wide. In this regard, WMO (World Meteorological Organization) asked KMA (Korea Meteorological Administration) to formulate a regional project, which cover most of RA II members, using similar technical system with KMA's. In that sense, Meteorological Research Institute (METRI) in KMA developed Mongolian NWP System (MNWPS) based on PC cluster and transferred the technology to Weather Service Center in Mongolia. The hybrid parallel algorithm and channel bonding technique were adopted to cut cost and showed 41% faster performance than single MPI (Message Passing Interface) approach. The cluster technique of Beowulf type was also adopted for convenient management and saving resources. The Linux based free operating system provide very cost effective solution for operating multi-nodes. Additionally, the GNU software provide many tools, utilities and applications for construction and management of a cluster. A flash flood event happened in Mongolia (2 September 2003) was selected for test run, and MNWPS successfully simulated the event with initial and boundary condition from Global Data Assimilation and Prediction System (GDAPS) of KMA. Now, the cluster based NWP System in Mongolia has been operated for local prediction around the region and provided various auxiliary charts.

Design and Implementation of Clusters with Single Process Space (단일 프로세스 공간을 제공하는 클러스터 시스템의 설계 및 구현)

  • Park, Min;Lee, Daewoo;Park, Dong-Gun;JungLok yu;Maeng, Seung-Ryoul
    • Proceedings of the Korean Information Science Society Conference
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    • 2004.04a
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    • pp.16-18
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    • 2004
  • Single system image(SSI) have been the mainstay high-performance computing for many years. SSI requires the integration and aggregation of all types of resources in a cluster to present a single interface to users. In this paper, we describe a cluster computing architecture with the concept of single process space(SPS) where all processes share a uniform process identification scheme. With SPS, a process on any node can create child process on the same or different node or communicate with any other process on a remote node, as if they are on a single node. For this purpose, SPS is built with the support of unique cluster-wide pid, signal forwarding, and remote fork. We propose a novel design of SPS cluster which addresses the scalability and flexibility problem of traditional clusterwidely unique pid implementation by using blocked pid assignment. We have implemented this new design of SPS cluster, and we demonstrate its performance by comparing it to Beowulf distributed process space. Benchmark performance results show that our design of SPS cluster realized both scalability and flexibility that are essential to building SPS cluster.

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A Study on Single Monitoring Agents for Cluster System (클러스터 시스템을 위한 단일 모니터링 에이전트에 대한 연구)

  • Park, Yu-Chan;Hohg, Tae-Young
    • Proceedings of the Korean Information Science Society Conference
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    • 2005.11a
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    • pp.1030-1032
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    • 2005
  • 고성능 컴퓨팅이 요구됨에 따라 유연성과 효율성을 가진 Beowulf형 클러스터 시스템의 활용이 증가되고 있다. Beowulf 형 클러스터는 각각이 독립적인 운영체제를 가진 노드로 구성되어 있기 때문에 관리 및 모니터링에 많은 어려움이 있다. 모니터링 프로그램은 각각의 노드를 관리함과 더불어 세부적인 시스템의 정보를 제공하도록 연구 개발되고 있다. 특히 단일 모니터링 에이전트는 좀 더 많은 정보의 요구로 인하여 시스템 자원을 적게 소모하면서 많은 데이터를 추출할 수 있도록 구성되어 있다. 본 논문에서는 단일 노드에 설치되어 직접 데이터를 수집하고 전송하는 단일 모니터링 에이전트에 대한 비교 및 분석을 수행하였다.

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Benchmarking a commodity server as a Compute node of Linux Cluster System (리눅스 클러스터 시스템 계산노드용 단일서버 벤치마크)

  • Hong, Tae-Young;Hong, Jeong-Woo;Kim, Sung-Ho
    • Proceedings of the Korean Information Science Society Conference
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    • 2005.07a
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    • pp.52-54
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    • 2005
  • Beowulf 타입의 리눅스 클러스터 시스템의 핵심노드인 계산노드는 일반적으로 범용 엔트리급 서버 및 PC 등을 이용하여 구성되며, 이 계산노드의 성능은 전체 클러스터의 계산 성능을 결정하는 가장 중요한 요소 중의 하나이다. 이에 본 논문에서는 현재 시중에서 유통 중인 대표적인 로엔드 플랫폼-Xeon, P-IV, Opteron, Athlon64-들을 대상으로 HPL, NPB, stream등 고성능 컴퓨팅 분야에서 널리 쓰이는 벤치마킹 테스트 도구를 사용하여 개별 노드의 성능을 측정하여 비교 분석하였다.

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Grid-Enabled Parallel Simulation Based on Parallel Equation Formulation

  • Andjelkovic, Bojan;Litovski, Vanco B.;Zerbe, Volker
    • ETRI Journal
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    • v.32 no.4
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    • pp.555-565
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    • 2010
  • Parallel simulation is an efficient way to cope with long runtimes and high computational requirements in simulations of modern complex integrated electronic circuits and systems. This paper presents an algorithm for parallel simulation based on parallelization in equation formulation and simultaneous calculation of matrix contributions for nonlinear analog elements. In addition, the paper describes the development of a grid interface for a parallel simulator that enables a designer to perform simulations on distant computer clusters. Performances of the developed parallel simulation algorithm are evaluated by simulation of a microelectromechanical system.

A Customized Cancer Radiation Treatment Planning Simulation (ccRTPs) System via Web and Network (웹과 네트워크 기술을 이용한 환자 맞춤식 암치료 계획 시뮬레이션 시스템)

  • Khm, O-Yeon
    • Progress in Medical Physics
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    • v.17 no.3
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    • pp.144-152
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    • 2006
  • The telemedicine using independent client-server system via networks can provide high quality normalized services to many hospitals, specifically to local/rural area hospitals. This will eventually lead to a decreased medical cost because the centralized institute can handle big computer hardware systems and complicated software systems efficiently and economically, Customized cancer radiation treatment planning for each patient Is very useful for both a patient and a doctor because it makes possible for the most effective treatment with the least possible dose to patient. Radiation planners know that too small a dose to the tumor can result in recurrence of the cancer, while too large a dose to healthy tissue can cause complications or even death. The best solution is to build an accurate planning simulation system to provide better treatment strategies based on each patient's computerized tomography (CT) image. We are developing a web-based and a network-based customized cancer radiation therapy simulation system consisting of four Important computer codes; a CT managing code for preparing the patients target data from their CT image files, a parallel Monte Carlo high-energy beam code (PMCEPT code) for calculating doses against the target generated from the patient CT image, a parallel linear programming code for optimizing the treatment plan, and scientific data visualization code for efficient pre/post evaluation of the results. The whole softwares will run on a high performance Beowulf PC cluster of about 100-200 CPUs. Efficient management of the hardware and software systems is not an easy task for a hospital. Therefore, we integrated our system into the client-sewer system via network or web and provide high quality normalized services to many hospitals. Seamless communication with doctors is maintained via messenger function of the server-client system.

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Performance Evaluation of Large Eddy Simulation for Recirculating and Swirling Flows (재순환 및 선회 유동에 대한 대와동모사(LES)의 성능검토)

  • Hwang Cheol-Hong;Lee Chang-Eon
    • Transactions of the Korean Society of Mechanical Engineers B
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    • v.30 no.4 s.247
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    • pp.364-372
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    • 2006
  • The objective of this study is to evaluate the efficiency and the prediction accuracy of developed large eddy simulation (LES) program for complex turbulent flows, such as recirculating and swirling flows. To save the computational cost, a Beowulf cluster system consisting 16 processors was constructed. The flows in backward-facing step and dump combustor were examined as representative recirculating and swirling flows. Firstly, a direct numerical simulation (DNS) for laminar backward-facing step flows was previously conducted to validate the overall performance of program. Then LES was carried out for turbulent backward-facing step flows. The results of laminar flow showed a qualitative and quantitative agreement between simulations and experiments. The simulations of the turbulent flow also showed reasonable results. Secondly, LES results for non-swirling and swirling flows in a dump combustor were compared with the results of Reynolds-averaged Navier-Stokes (RANS) using standard $k-{\varepsilon}$ model. The results show that LES has a better performance in predicting the mean axial and azimuthal velocities, comer recirculation zone (CRZ) and center toroidal recirculation zone (CTRZ) than those of RANS. Finally, it was examined the capability of LES for the description of unsteady phenomena.

Verification of the PMCEPT Monte Carlo dose Calculation Code for Simulations in Medical Physics (의학물리 분야에 사용하기 위한 PMCEPT 몬테카를로 도즈계산용 코드 검증)

  • Kum, O-Yeon
    • Progress in Medical Physics
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    • v.19 no.1
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    • pp.21-34
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    • 2008
  • The parallel Monte Carlo electron and photon transport (PMCEPT) code [Kum and Lee, J. Korean Phys. Soc. 47, 716 (2006)] for calculating electron and photon beam doses has been developed based on the three dimensional geometry defined by computed tomography (CT) images and implemented on the Beowulf PC cluster. Understanding the limitations of Monte Carlo codes is useful in order to avoid systematic errors in simulations and to suggest further improvement of the codes. We evaluated the PMCEPT code by comparing its normalized depth doses for electron and photon beams with those of MCNP5, EGS4, DPM, and GEANT4 codes, and with measurements. The PMCEPT results agreed well with others in homogeneous and heterogeneous media within an error of $1{\sim}3%$ of the dose maximum. The computing time benchmark has also been performed for two cases, showing that the PMCEPT code was approximately twenty times faster than the MCNP5 for 20-MeV electron beams irradiated on the water phantom. For the 18-MV photon beams irradiated on the water phantom, the PMCEPT was three times faster than the GEANT4. Thus, the results suggest that the PMCEPT code is indeed appropriate for both fast and accurate simulations.

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