• The Korean Journal of Mycology
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• v.49 no.1
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• pp.87-100
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• 2021

This study aimed to isolate wild yeasts obtained from flowers and soil of the Wolpyung park, Daejeon city and Gykpo beach, Buan, Jeollabuk-do in Korea, and to further characterize previously unrecorded wild yeast strains. In total, 88 strains of 62 different species of wild yeasts were isolated from 75 samples obtained from the Wolpyung park. Among these, six strains of Trichosporon moniliiforme and four strains each of Papiliotrema flavescens and Candida melibiosica were isolated. Additionally, 39 strains of 30 different species of wild yeasts were isolated from 35 samples collected from the Gykpo beach. Among the 127 isolated wild yeast strains, 10 strains, including Apiotrichum porosum ASCM32-1, were previously unrecorded. All the 10 previously unrecorded yeasts were oval or global in shape, and three strains, including Candida athensensis WP4-90-3, formed spores. Three strains, including Vishniacozyma taibaiensis WP13-2, were halophilic yeasts which grew in 15% NaCl-containing YPD(yeast extract-peptone-dextrose) medium. Five strains, including C. athensensis WP4-90-3, showed 15% ethanol resistance. Cell-free extracts from Candida oleophila WP5-19-1 and Wickerhamomyces anomalus HO9-2 showed the highest β-glucuronidase inhibitory activity (49.0%) and neutrophil elastase inhibitory activity (38.4%), respectively.

• Korean Journal of Environment and Ecology
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• v.23 no.4
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• pp.365-375
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• 2009

The growth characteristics of Pinus thunbergii windbreak forest around Goosipo Beach, Sangha-Myon, Gochang-Gun, Jeollabuk-Do have been investigated, and the results are summarized as follows. The soil in the site was light acid sand with pH 5.7, and the mean sodium concentration of soils was 1.42dS/m. The tree diameter, height, crown width, and shape ratio(Height/DBH) were better with tree density was coming lower. Especially, the rate of shape ratio under 60 was more in sites with low tree density. This demonstrated that the trees have grown more soundly when the tree density was lower. The direction of main winds and distribution ratio of tree inclination had a correlation. The inclined trees are seemed to be influenced by main winds when they were younger and by Typhoon partly. Eighty one vascular plant species were found in the sites, and more number of herbaceous plants (57 taxa) lived there than woody plants (24 taxa). And more plant species of dune were found at the site where dune have developed well. Some thinning works need at high tree density areas in order to ensure effects of coastal windbreak.

• The Korean Journal of Mycology
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• v.50 no.1
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• pp.65-73
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• 2022

This study aimed to isolate wild yeasts from seawaters and soils samples of the Haeundae and Mongdol beaches on the southern coast of Korea, and to characterize these unrecorded wild yeast strains. In total, 41 strains, representing 37 different species of wild yeast were isolated from 70 samples collected from the beaches. Among these, 14 strains were isolated from the alkalophilic medium of yeast extract-peptone-dextrose (YPD) medium (pH 9.0), and 27 strains were isolated concurrently on general YPD medium (pH 6.5). Among the 41 isolated wild yeast strains, Candida insectorum HUD 16-3(JSL-KSS-002) and Metschnikowia citriensis HUD 12-5(JSL-KSS-001) had not previously been recorded. We investigated the microbiological characteristics of these two unrecorded yeast strains and three other strains-, Cystobasidium lysinophilum JSC 52-2(JSL-GGU-019), Candida takata NMD 11-1(JSL-GGU-017) and Candida panamensis ASG 58M-2(JSL-GGU-018) from Jangseoncheon in Jellabuk-do and Jangtaesan in Deajeon city. All five previously unrecorded yeasts were oval and did not form spores. All strains grew well in YPD and yeast extract-malt extract media in a vitamin-free medium. Two strains, including C. insectorum HUD 16-3(JSL-KSS-002) grew well in a 15% NaCl-containing YPD medium. Three strains, including Cys. lysinophilum JSC52-2(JSL-GGU-019) assimilated lactose, and all strains assimilated starch.

• Biotechnology and Bioprocess Engineering:BBE
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• v.10 no.6
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• pp.482-493
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• 2005

Biomass is originally photosynthesized from inorgainic compounds such as $CO_2$, minerals, water and solar energy. Recent studies have shown that anaerobic bacteria have the ability to convert recalcitrant biomass such as cellullosic or chitinoic materials to useful compounds. The biomass containing agricultural waste, unutilized wood and other garbage is expected to utilize as feed, food and fuel by microbial degradation and other metabolic functions. In this study we isolated several anaerobic, cellulolytic and chitinolytic bacteria from rumen fluid, compost and soil to study their related enzymes and genes. The anaerobic and cellulolytic bacteria, Clostridium thermocellum, Clostridium stercorarium, and Clostridium josui, were isolated from compost and the chitinolytic Clostridium paraputrificum from beach soil and Ruminococcus albus was isolated from cow rumen. After isolation, novel cellulase and xylanase genes from these anaerobes were cloned and expressed in Escherichia coli. The properties of the cloned enzymes showed that some of them were the components of the enzyme (cellulase) complex, i.e., cellulosome, which is known to form complexes by binding cohesin domains on the cellulase integrating protein (Cip: or core protein) and dockerin domains on the enzymes. Several dockerin and cohesin polypeptides were independently produced by E. coli and their binding properties were specified with BIAcore by measuring surface plasmon resonance. Three pairs of cohesin-dockerin with differing binding specificities were selected. Two of their genes encoding their respective cohesin polypeptides were combined to one gene and expressed in E. coli as a chimeric core protein, on which two dockerin-dehydrogenase chimeras, the dockerin-formaldehyde dehydrogenase and the dockerin-NADH dehydrogenase are planning to bind for catalyzing $CO_2$ reduction to formic acid by feeding NADH. This reaction may represent a novel strategy for the reduction of the green house gases. Enzymes from the anaerobes were also expressed in tobacco and rice plants. The activity of a xylanase from C. stercorarium was detected in leaves, stems, and rice grain under the control of CaMV35S promoter. The digestibility of transgenic rice leaves in goat rumen was slightly accelerated. C. paraputrificum was found to solubilize shrimp shells and chitin to generate hydrogen gas. Hydrogen productivity (1.7 mol $H_2/mol$ glucos) of the organism was improved up to 1.8 times by additional expression of the own hydrogenase gene in C. paraputrficum using a modified vector of Clostridiu, perfringens. The hydrygen producing microflora from soil, garbage and dried pelletted garbage, known as refuse derived fuel(RDF), were also found to be effective in converting biomass waste to hydrogen gas.

• Journal of The Geomorphological Association of Korea
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• v.25 no.3
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• pp.43-55
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• 2018

This study aimed to identify different sedimentary environments of Gochang coast according to geomorphic conditions of each bore hole. To achieve the aim, this study utilized the classification of sedimentary environmental conditions of surface sediment, which was based on grain size distribution characteristics.In other words, three sedimentary environmental conditions ofsandy flat + sand beach, coastal sand dune and weathered bedrock soil, which were distinguished based on grain size distribution characteristics of mean-sorting for surface sediments, were applied to the sediments of bore holes. Four sedimentary environments could be identified in Gochang coast. First, the lake sedimentary environment originated from terrestrial sediments seems to have been dominated by weathered bedrock soil that the surface flow has deposited in a coastal wetland or a boundary, which is affected by the sea. Second, the lake sedimentary environment that is little affected by coastal sand dunes is located at the center of a valley, which is connected to the land, and the dune slack of Saban-ri. The surface flow of weather bedrock soil is the main source of deposits. However, there seems to have been a temporary influence of the sea. Third, the lake sedimentary environment that is strongly affected by coastal sand dunes is located at the dune slack of Yeongjeong-ri. This environment shows traces of a change from a coastal sand dune into the dune slack. Finally, the coastalsand dune sedimentary environment, which wasinvestigated by boring the current coastal sand dune, shows a temporary influence of the land but seems to have maintained the overall stability. Consequently, this study demonstrated that the grain size distribution characteristics of the present surface sediments could be effectively applied to identify the sedimentary environments of the paleo bore hole sediments. In addition, the paleo change of sedimentary environment could also be identified in many places of Gochang coast. If the results of this study are combined with the age dating and geochemical analysis in future works, the paleo environmental change in Gochang coast will be restored more precisely.

• Journal of the Korean Association of Geographic Information Studies
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• v.8 no.2
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• pp.186-195
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• 2005

Topography of beach line is keeping stability for several years, their soil values have been maintained in balances. Install of coastal structures have caused deformation for beaches and acted as a function to structures. Therefore, quantitative prediction of beaches topography according to structure install is required to prevent the beaches deformation and progress proper coastal preservation work. In this study, we analyzed coastal changes caused by erosion and accretion according to development and drew up a cross-section to share 8 stations using coordinates and depth surveying in groin of Soheuksan island port. Elevation distribution and changes by observation period is calculated -0.30m~+0.20m after comparing results of five months in October 7, 2004 surveying results and fell into insignificance. We thinks periodic observation of coastal erosion and accretion take place for the season and long-term coastal changes in beaches width is analyzed.

• Journal of Microbiology and Biotechnology
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• v.16 no.12
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• pp.1862-1867
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• 2006

A moderately halophilic, Gram-positive, spore-forming bacterium was isolated from the roots of Blutaparon portulacoides, a plant found in sandy soil parallel to the beach line in Restinga de Jurubatiba, Rio de Janeiro, Brazil. The strain, designated $M9^T$, was motile and strictly aerobic with rod-shaped cells. It grew in the absence of NaCl and up to 20% NaCl, and was able to hydrolyze casein and starch. Strain $M9^T$ had a cell-wall peptidoglycan based on L-Orn-D-Asp, the predominant menaquinone present was menaquinone-7 (MK-7), diaminopimelic acid was not found, and anteiso-$C_{15:0}$ and iso-$C_{15:0}$ were the major fatty acids. A phylogenetic analysis based on 16S rRNA gene sequences showed that strain $M9^T$ belonged to the genus Halobacillus and exhibited 16S rRNA gene similarity levels of 97.8-99.4% with the type strains of the other nine Halobacillus species. The DNA-DNA relatedness of strain $M9^T$ with H. trueperi, the closest relative as regards 16S rRNA gene similarity, and H. locisalis was 21% and 18%, respectively. Therefore, on the basis of phenotypic, genotypic, and phylogenetic data, strain $M9^T$ (=ATCC BAA-$1217^T$, =CIP $108771^T$, =KCTC $3980^T$) should be placed in the genus Halobacillus as a member of a novel species, for which the name Halobacillus blutaparonensis sp. nov. is proposed.

• Journal of Species Research
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• v.8 no.4
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• pp.319-336
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• 2019

During an investigation of unrecorded prokaryotic species in Republic of Korea, a total of 53 bacterial strains belonging to the class Gammaproteobacteria were isolated from soil, seawater, tidal flats, rhizosphere, salt ponds, beach sand, urine, manure, sediment, and animal intestine (Russian grayling butterfly [Hipparchia autonoe], mouse [Mus musculus], and sea bass [Lateolabrax japonicus]). Strains were identified to species using the 16S rRNA gene sequence, showing high similarity (>98.7%) with the closest bacterial species and forming a robust clade in the neighbor-joining phylogenetic tree. The 53 strains of Gammaproteobacteria in this study have not been report previously in Korea. Therefore, we describe 27 genera of 16 families in 7 orders: 13 strains in the order Alteromonadales, 1 strain in the order Chromatiales, 11 strains in the order Enterobacterales, 7 strains in the order Oceanospirillales, 10 strains in the order Pseudomonadales, 8 strains in the order Vibrionales, and 3 strains in the order Xanthomonadales. Gram reaction, strain ID, isolation source, and morphological and basic biochemical characteristics are described for each species.

• The Korean Journal of Soil Zoology
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• v.5 no.2
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• pp.133-137
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• 2000

Community and distribution of Coleoptera were investigated in 4 different regional areas (Danseoksan, Tohamsan, Namsanm and Daebon) of Kyeougju National Park from June 17, 1997 to Oct. 30, 1997 by sweeping net method. 565 individuals belonging to 139 species, 115 genera in 30 families were collected. Species diversity was much higher in the areas of Tohamsan and Danseoksan (0.716 and 0.762, respectively) than the other areas because of the good plantation for the leaf beetles. In the family Chrysomelidae, Tohamsan area revealed very high Simpson diversity index, a 0.916. On the other way, Simpson diversity index was 0 in Daebon area which had very simple plantation with beach side and pine trees. Chrysomelidae was the most abundant; 270 individuals belonging to 45 species of 34 genera. Among them, Mordellina brunneotincta Marseul was the highest frequency. And then, the species of Coccinellidae, Alleculidae, Cerambycidae, Attelabidae and Curculionidae were mostly abundant in all regional area. Stigmatium pilosellum Gorham, Mordellina brunneotincta Marseul and Rhaphirtropis guttifer Sharp were newly recorded in Korea.

• Journal of the Korean Geophysical Society
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• v.2 no.1
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• pp.45-56
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• 1999

Seismic refracrion and reflection surveys were conducted along an E-W trending track of 482 m long in Ilwall-dong, Pohang. End-on spread was employed as source-receiver configuration with 2 m for both geophone interval and offset. Seismic data were acquired using 24 channels at every shot fired every 2 m along the track. Refraction data were interpreted using equations for multi-horizontal layers. Reflection data were processed in the sequence of trace edit, gain control, CMP sorting, NMO correction, mute, common offset gathering, and filtering to produce a single fold seismic section. There are two layers in shallow subsurface of the study area. Upper layer has the P-wave velocities ranging from 267 to 566 m/s and is interpreted as a layer of unconsolidated sediments. Lower layer has P-wave velocities of 1096-3108 m/s and is interpreted as weathered rock to hard rock. Most of the lower layer classified as soft rock. Upper layer has lateral variations in both P-wave velocity and thickness. The upper layer in the eastern part of the seismic line is 3-5 m thick and has P-wave velocity of 400 m/s in average. The upper layer in the western part is 8-10 m thick and has P-wave velocity of 340 m/s in average. The eastern part is interpreted as unconsolidated beach sand, while the western part is interpreted as infilled soil to develop a construction site. Three fault systems of high angle are imaged in seismic reflection section. It is interpreted that the area between these fault systems are relatively safe. Large buildings should be located in the safe ground condition of no fault and footings should be designed to be in the basement rock of 3-10 m deep below the surface.