• 제목/요약/키워드: Bayesian threshold model

검색결과 41건 처리시간 0.022초

Bayesian estimates of genetic parameters of non-return rate and success in first insemination in Japanese Black cattle

  • Setiaji, Asep;Arakaki, Daichi;Oikawa, Takuro
    • Animal Bioscience
    • /
    • 제34권7호
    • /
    • pp.1100-1104
    • /
    • 2021
  • Objective: The objective of present study was to estimate heritability of non-return rate (NRR) and success of first insemination (SFI) by using the Bayesian approach with Gibbs sampling. Methods: Heifer Traits were denoted as NRR-h and SFI-h, and cow traits as NRR-c and SFI-c. The variance covariance components were estimated using threshold model under Bayesian procedures THRGIBBS1F90. Results: The SFI was more relevant to evaluating success of insemination because a high percentage of animals that demonstrated no return did not successfully conceive in NRR. Estimated heritability of NRR and SFI in heifers were 0.032 and 0.039 and the corresponding estimates for cows were 0.020 and 0.027. The model showed low values of Geweke (p-value ranging between 0.012 and 0.018) and a low Monte Carlo chain error, indicating that the amount of a posteriori for the heritability estimate was valid for binary traits. Genetic correlation between the same traits among heifers and cows by using the two-trait threshold model were low, 0.485 and 0.591 for NRR and SFI, respectively. High genetic correlations were observed between NRR-h and SFI-h (0.922) and between NRR-c and SFI-c (0.954). Conclusion: SFI showed slightly higher heritability than NRR but the two traits are genetically correlated. Based on this result, both two could be used for early indicator for evaluate the capacity of cows to conceive.

Estimating dose-response curves using splines: a nonparametric Bayesian knot selection method

  • Lee, Jiwon;Kim, Yongku;Kim, Young Min
    • Communications for Statistical Applications and Methods
    • /
    • 제29권3호
    • /
    • pp.287-299
    • /
    • 2022
  • In radiation epidemiology, the excess relative risk (ERR) model is used to determine the dose-response relationship. In general, the dose-response relationship for the ERR model is assumed to be linear, linear-quadratic, linear-threshold, quadratic, and so on. However, since none of these functions dominate other functions for expressing the dose-response relationship, a Bayesian semiparametric method using splines has recently been proposed. Thus, we improve the Bayesian semiparametric method for the selection of the tuning parameters for splines as the number and location of knots using a Bayesian knot selection method. Equally spaced knots cannot capture the characteristic of radiation exposed dose distribution which is highly skewed in general. Therefore, we propose a nonparametric Bayesian knot selection method based on a Dirichlet process mixture model. Inference of the spline coefficients after obtaining the number and location of knots is performed in the Bayesian framework. We apply this approach to the life span study cohort data from the radiation effects research foundation in Japan, and the results illustrate that the proposed method provides competitive curve estimates for the dose-response curve and relatively stable credible intervals for the curve.

베이지안 분계점 모형에 의한 순서 범주형 변수의 대체 (Imputation for Binary or Ordered Categorical Traits Based on the Bayesian Threshold Model)

  • 이승천
    • 응용통계연구
    • /
    • 제18권3호
    • /
    • pp.597-606
    • /
    • 2005
  • 대개의 표본조사에서 무응답은 필연적으로 발생되고 있고, 직접 표본조사에 참가하지 않은 데이터의 사용자는 무응답의 원인을 알 수 없는 것이 일반적이므로 데이터 분석에 어려움을 갖는다. 또 대부분의 통계분석 방법은 무응답을 전제하지 않고 있어 무응답이 있는 항목은 데이터 분석의 걸림돌이 된다고 하겠다. 최근 무응답에 대해 대체법이 하나의 표준적인 처리 방법이 되고 있어 현재까지 대체법에 대한 많은 연구가 있었으나 대부분의 대체법은 정규성 등을 가정한 연속형 변수의 대체법에 대한 것이었다. 그러나 표본조사에서 많은 중요한 항목들이 순서 범주에 의해 측정되는 경우가 많으므로 범주형변수의 대체법에 대한 연구가 필요하며, 본 연구에서는 보조변수가 있는 경우 Bayesian 모형에 의한 순서범주형 항목의 대체법에 대해 알아본다.

극치수문자료의 계절성 분석 개념 및 비정상성 빈도해석을 이용한 확률강수량 해석 (Concept of Seasonality Analysis of Hydrologic Extreme Variables and Design Rainfall Estimation Using Nonstationary Frequency Analysis)

  • 이정주;권현한;황규남
    • 한국수자원학회논문집
    • /
    • 제43권8호
    • /
    • pp.733-745
    • /
    • 2010
  • 수문자료의 계절성은 수자원관리의 관점에서 매우 중요한 요소로서 계절성의 변동은 댐의 운영, 홍수조절, 관개용수 관리 등 다양한 분야와 밀접한 관계를 가지고 있다. 수문빈도해석을 위해 POT 자료와 같은 부분기간치계열을 사용함으로써 자료의 확충, 계절성 확보, 발생빈도모형의 구축 등이 가능하다. 본 연구에서는 POT 자료의 장점을 효과적으로 빈도해석에 연계시키는 방법론으로서 POT 자료로부터 계절성을 추출하고 이를 빈도해석과 연계시켜 Bayesian 기법을 기반으로 하는 비정상성 빈도해석 모형을 구축하였다. 서울지점의 관측 자료로부터 98% Threshold를 적용하여 POT 자료를 추출하였으며, GEV 분포에 대한적합성을 검토하였다. 위치 및 규모매개변수의 계절적변동성을 Fourier 급수로 표현하고, Bayesian Markov Chain Monte Carlo 모의를 통해 매개변수들의 사후분포를 추정하였으며, 사후분포와 Quantile 함수를 이용하여 재현기간에 따른 확률강수량을 추정하였다. 계절성을 고려한 비정상성빈도해석 결과 7~8월의 비정상성 확률강수량과 기존 정상성빈도해석의 결과가 유사한 값을 나타내고 있으며 동시에 계절성을 반영한 확률강수량의 거동을 효과적으로 모의가 가능하였다.

A Bayesian Wavelet Threshold Approach for Image Denoising

  • Ahn, Yun-Kee;Park, Il-Su;Rhee, Sung-Suk
    • Communications for Statistical Applications and Methods
    • /
    • 제8권1호
    • /
    • pp.109-115
    • /
    • 2001
  • Wavelet coefficients are known to have decorrelating properties, since wavelet is orthonormal transformation. but empirically, those wavelet coefficients of images, like edges, are not statistically independent. Jansen and Bultheel(1999) developed the empirical Bayes approach to improve the classical threshold algorithm using local characterization in Markov random field. They consider the clustering of significant wavelet coefficients with uniform distribution. In this paper, we developed wavelet thresholding algorithm using Laplacian distribution which is more realistic model.

  • PDF

최심신적설량 빈도분석을 위한 임계값을 가지는 일반화된 혼합분포모형 개발 (Development of Snow Depth Frequency Analysis Model Based on A Generalized Mixture Distribution with Threshold)

  • 김호준;김장경;권현한
    • 한국방재안전학회논문집
    • /
    • 제13권4호
    • /
    • pp.25-36
    • /
    • 2020
  • 기후변화로 인해 다양한 자연재해의 발생빈도 및 강도가 증가하고 있으며, 이를 대비하기 위하여 행정안전부에서 가뭄과 대설까지 포함한 자연재해저감 종합계획을 발표하였다. 강설량은 기온과 지형적 요인의 영향을 크게 받는다. 산악지형이 많은 강원도는 강설량이 많아 큰 적설량이 관측되지만, 겨울철 평균 온도가 상대적으로 높은 남부지방은 적설량이 작다. 무강설과 결측으로 인해 관측값에 0이 포함된 경우가 존재한다. 자료에 포함된 0은 통계적으로 민감하게 작용하며, 최적 확률분포 선정과 매개변수 추정이 어려워지는 문제점이 발생한다. 본 연구에서는 창원, 통영, 진주 관측소의 최심신적설에 대해 혼합분포를 적용하여 0을 구분하였고, 0에 근사한 값을 나누는 기준인 임계값을 매개변수 𝛿로 가정함으로써 무적설 기준을 자동으로 모형에서 추정하도록 하였다. Bayesian기법 활용하여 혼합분포모형의 매개변수를 추정하였고, 산정된 빈도별 확률적설심의 불확실성을 정량화하였다. 대관령 지점과 비교한 결과, 본 연구의 혼합분포모형은 적설량이 적은 지점에 대해 적용성이 우수한 것으로 평가되었다.

Genetic parameters for worm resistance in Santa Inês sheep using the Bayesian animal model

  • Rodrigues, Francelino Neiva;Sarmento, Jose Lindenberg Rocha;Leal, Tania Maria;de Araujo, Adriana Mello;Filho, Luiz Antonio Silva Figueiredo
    • Animal Bioscience
    • /
    • 제34권2호
    • /
    • pp.185-191
    • /
    • 2021
  • Objective: The objective of this study was to estimate the genetic parameters for worm resistance (WR) and associated characteristics, using the linear-threshold animal model via Bayesian inference in single- and multiple-trait analyses. Methods: Data were collected from a herd of Santa Inês breed sheep. All information was collected with animals submitted to natural contamination conditions. All data (number of eggs per gram of feces [FEC], Famacha score [FS], body condition score [BCS], and hematocrit [HCT]) were collected on the same day. The animals were weighed individually on the day after collection (after 12-h fasting). The WR trait was defined by the multivariate cluster analysis, using the FEC, HCT, BCS, and FS of material collected from naturally infected sheep of the Santa Inês breed. The variance components and genetic parameters for the WR, FEC, HCT, BCS, and FS traits were estimated using the Bayesian inference under the linear and threshold animal model. Results: A low magnitude was obtained for repeatability of worm-related traits. The mean values estimated for heritability were of low-to-high (0.05 to 0.88) magnitude. The FEC, HCT, BCS, FS, and body weight traits showed higher heritability (although low magnitude) in the multiple-trait model due to increased information about traits. All WR characters showed a significant genetic correlation, and heritability estimates ranged from low (0.44; single-trait model) to high (0.88; multiple-trait model). Conclusion: Therefore, we suggest that FS be included as a criterion of ovine genetic selection for endoparasite resistance using the trait defined by multivariate cluster analysis, as it will provide greater genetic gains when compared to any single trait. In addition, its measurement is easy and inexpensive, exhibiting greater heritability and repeatability and a high genetic correlation with the trait of resistance to worms.

피로 인식을 위한 베이지안 네트워크 모델 (Bayesian Network Model for Human Fatigue Recognition)

  • 이영식;박호식;배철수
    • 한국통신학회논문지
    • /
    • 제30권9C호
    • /
    • pp.887-898
    • /
    • 2005
  • 본 논문에서는 피로를 인식하기 위하여 베이지안 네트워크를 기반으로 한 확률 모델을 제안하고자 한다. 먼저 적외선 조명을 조사하여 눈거풀의 움직임, 시선 방향, 얼굴의 움직임 및 얼굴 표정 같은 얼굴특징정보를 측정하였다. 그러나 각각의 얼굴특징정보만으로 생체 피로를 결정하기에는 충분하지 않다. 그러므로, 본 논문에서는 생체 피로를 확률적 추론하기 위하여 가능한 많은 피로 원인에 대한 정보와 얼굴특징정보들로 베이지안 네트워크 모델을 구성하여 BN 피로지수를 산출하였다. 또한, BN 피로지수의 문턱치값은 MSBNX 시물레이션 결과 0.95로 산출되었다. 실험 결과 BN 피로지수와 TOVA 응답 시간을 비교한 결과 밀접한 상관관계가 있음을 확인하여 제안한 피로인식모델의 유효성을 입증하였다.

Genetic parameters for marbling and body score in Anglonubian goats using Bayesian inference via threshold and linear models

  • Figueiredo Filho, Luiz Antonio Silva;Sarmento, Jose Lindenberg Rocha;Campelo, Jose Elivalto Guimaraes;de Oliveira Almeida, Marcos Jacob;de Sousa, Antonio Junior;da Silva Santos, Natanael Pereira;da Silva Costa, Marcio;Torres, Tatiana Saraiva;Sena, Luciano Silva
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제31권9호
    • /
    • pp.1407-1414
    • /
    • 2018
  • Objective: The aim of this study was to estimate (co) variance components and genetic parameters for categorical carcass traits using Bayesian inference via mixed linear and threshold animal models in Anglonubian goats. Methods: Data were obtained from Anglonubian goats reared in the Brazilian Mid-North region. The traits in study were body condition score, marbling in the rib eye, ribeye area, fat thickness of the sternum, hip height, leg perimeter, and body weight. The numerator relationship matrix contained information from 793 animals. The single- and two-trait analyses were performed to estimate (co) variance components and genetic parameters via linear and threshold animal models. For estimation of genetic parameters, chains with 2 and 4 million cycles were tested. An 1,000,000-cycle initial burn-in was considered with values taken every 250 cycles, in a total of 4,000 samples. Convergence was monitored by Geweke criteria and Monte Carlo error chain. Results: Threshold model best fits categorical data since it is more efficient to detect genetic variability. In two-trait analysis the contribution of the increase in information and the correlations between traits contributed to increase the estimated values for (co) variance components and heritability, in comparison to single-trait analysis. Heritability estimates for the study traits were from low to moderate magnitude. Conclusion: Direct selection of the continuous distribution of traits such as thickness sternal fat and hip height allows obtaining the indirect selection for marbling of ribeye.

Experimental investigation on multi-parameter classification predicting degradation model for rock failure using Bayesian method

  • Wang, Chunlai;Li, Changfeng;Chen, Zeng;Liao, Zefeng;Zhao, Guangming;Shi, Feng;Yu, Weijian
    • Geomechanics and Engineering
    • /
    • 제20권2호
    • /
    • pp.113-120
    • /
    • 2020
  • Rock damage is the main cause of accidents in underground engineering. It is difficult to predict rock damage accurately by using only one parameter. In this study, a rock failure prediction model was established by using stress, energy, and damage. The prediction level was divided into three levels according to the ratio of the damage threshold stress to the peak stress. A classification predicting model was established, including the stress, energy, damage and AE impact rate using Bayesian method. Results show that the model is good practicability and effectiveness in predicting the degree of rock failure. On the basis of this, a multi-parameter classification predicting deterioration model of rock failure was established. The results provide a new idea for classifying and predicting rockburst.