• 제목/요약/키워드: Balancing Of Plant

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Transposable Elements and Genome Size Variations in Plants

  • Lee, Sung-Il;Kim, Nam-Soo
    • Genomics & Informatics
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    • 제12권3호
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    • pp.87-97
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    • 2014
  • Although the number of protein-coding genes is not highly variable between plant taxa, the DNA content in their genomes is highly variable, by as much as 2,056-fold from a 1C amount of 0.0648 pg to 132.5 pg. The mean 1C-value in plants is 2.4 pg, and genome size expansion/contraction is lineage-specific in plant taxonomy. Transposable element fractions in plant genomes are also variable, as low as ~3% in small genomes and as high as ~85% in large genomes, indicating that genome size is a linear function of transposable element content. Of the 2 classes of transposable elements, the dynamics of class 1 long terminal repeat (LTR) retrotransposons is a major contributor to the 1C value differences among plants. The activity of LTR retrotransposons is under the control of epigenetic suppressing mechanisms. Also, genome-purging mechanisms have been adopted to counter-balance the genome size amplification. With a wealth of information on whole-genome sequences in plant genomes, it was revealed that several genome-purging mechanisms have been employed, depending on plant taxa. Two genera, Lilium and Fritillaria, are known to have large genomes in angiosperms. There were twice times of concerted genome size evolutions in the family Liliaceae during the divergence of the current genera in Liliaceae. In addition to the LTR retrotransposons, non-LTR retrotransposons and satellite DNAs contributed to the huge genomes in the two genera by possible failure of genome counter-balancing mechanisms.

관계형 데이터베이스를 이용한 PDMS/PDS의 통합 데이터 모델링에 관한 연구 (A study on the integrated data modeling for the plant design management system and the plant design system using relational database)

  • 양영태;김재균
    • 한국해양공학회지
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    • 제11권3호
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    • pp.200-211
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    • 1997
  • Most recently, offshore Engineering & Construction field is concerned about integration management technology such as CIM(Computer Integrated Manufacturing), PDM(Product Data Management) and Enterprise Information Engineering in order to cope with the rapid change of engineering and manufacturer specification as per owner's requirement during construction stage of the project. System integration and integrated data modeling with relational database in integration management technology improve the quality of product and reduce the period of the construction project by reason of owing design information jointly. This paper represents the design methodology of system integration using Business Process Reengineering by the case study. The case study is about the offshore plant material information process from front end engineering design to detail engineering for the construction and the basis of monitoring system by integrating and sharing the design information between the 2D intelligent P&ID and 3D plant modeling using relational database. As a result of the integrated data modeling and system integration, it is possible to maintain the consistency of design process in point of view of the material balancing and reduce the design assumption/duration. Near future, this system will be expanded and connected with the MRP(Material Requirement Planing) and the POR (Purchase Order Requisition) system.

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유체 커플링의 맥놀이 현상 사례 연구 (Case Studies on Beating Phenomena of Hydraulic Couplings)

  • 최성필;박종포;김호종
    • 한국소음진동공학회:학술대회논문집
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    • 한국소음진동공학회 1997년도 춘계학술대회논문집; 경주코오롱호텔; 22-23 May 1997
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    • pp.133-138
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    • 1997
  • Belt-conveyer driving systems, which transport coal stored in the yard of a coal-fired fossil power plant to coal silos, experienced severe vibrations. From measurement, it was found that the vibrations showed beating phenomenoa and arose from hydraulic couplings installed between motors and gear boxes. In the present paper, described are results of case studies on vibration troubleshooting for the belt-conveyor driving systems: 1)resonance of the system; 2)field balancing.

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외란관측기 설계를 위한 Q필터 시정수 영향 분석 : 외바퀴 로봇의 균형 제어 응용 (Analysis of a Time-constant Effect in the Q-filter for Designing a Disturbance Observer: Balancing Control of a Single-wheel Robot)

  • 이상덕;정슬
    • 전자공학회논문지
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    • 제53권11호
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    • pp.123-129
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    • 2016
  • 본 논문에서는 외바퀴 로봇의 균형 제어 성능을 향상할 목적으로 외란관측기를 사용한다. 외란관측기의 설계는 역 공칭 모델 설계와 Q필터 설계의 두 과정으로 구성된다. 외바퀴 로봇의 역 공칭 모델을 역 스틱 모델로 부터 유도하고 역 공칭 모델의 안정화를 위한 Q필터를 설계한다. 이 과정에서 Q31의 형태를 갖는 필터를 설계하고 Q필터 시정수의 영향에 관한 실험적인 검증 결과를 제시한다. 시정수는 외란 억제 대역폭을 결정하는 역할을 하지만 외란 억제와 센서 잡음 내성은 상보적인 특성을 갖고 있다. 그러므로 전체 시스템을 고려하여 적절한 시정수가 선택되어야만 한다. 이를 해결하기 위해 3개의 서로 다른 시정수가 외란관측기에 각각 사용되었을 때의 제어 성능을 비교하는 실험을 수행한다. 결과 분석을 바탕으로 한 바퀴 로봇의 균형 제어에 대한 외란관측기 설계에 적합한 시정수 변수의 설계 범위를 제안한다.

증기터빈용 Synchro Clutch Coupling의 진동 특성 (Vibration Characteristics of a Synchro Clutch Coupling for Steam Turbine)

  • 심응구;이태구;문승재;이재헌
    • 플랜트 저널
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    • 제4권3호
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    • pp.66-72
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    • 2008
  • The vibration of steam turbine is caused by Mass unbalance, Shaft misalignment, Oil whip and rubbing etc. But in turbine which is normally operated and maintained, the Mass unbalance component possesses the greatest portion. Our power plant has two steam turbines in capacity of 200 MW and 135 MW respectively and each turbine is supported by 6 journal bearings. However, we had many difficulties because the vibration amplitude of #3 and #4 Bearings was high during the start-up and operation mode change of steam turbine. But, with this study, we completely solved the vibration problem caused by the mass unbalance of #1 steam turbine. Until a recent date, #3 and #4 bearings which support high pressure turbine for #1 steam turbine had shown about $135{\mu}m$ in vibration amplitude (sometimes it increased to $221{\mu}m$ maximum. alarm: 6 mils, trip: 9 mils) at base load. After applying the study, they decreased to about $45{\mu}m$ maximum. It is a result from that we did not change the setting value of bearing alignment and only changed the assembly position of internal parts in Synchro clutch coupling rachet wheel which links between high pressure turbine and low pressure turbine, and increased the internal gap and machining of the Pawl cage surface. In the operation of steam turbine, if the vibration value increases by 1X, we should reduce the vibration of bearing by weight balancing. However, unless the vibration of bearing is declined by the balancing, we will have to disassemble and check the component and find the cause. In this study, we researched the way to lower mass unbalance that is 1X vibration component which has the greatest portion of vibration generated by steam turbine and we got good result by applying the findings of this study.

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Parallel Process System and its Application to Steam Generator Structural Analysis

  • Chang Yoon-Suk;Ko Han-Ok;Choi Jae-Boong;Kim Young-Jin
    • Journal of Mechanical Science and Technology
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    • 제19권11호
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    • pp.2007-2015
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    • 2005
  • A large-scale analysis to evaluate complex material and structural behaviors is one of interesting topic in diverse engineering and scientific fields. Also, the utilization of massively parallel processors has been a recent trend of high performance computing. The objective of this paper is to introduce a parallel process system which consists of general purpose finite element analysis solver as well as parallelized PC cluster. The later was constructed using eight processing elements and the former was developed adopting both hierarchical domain decomposition method and balancing domain decomposition method. Then, to verify the efficiency of the established system, it was applied for structural analysis of steam generator in nuclear power plant. Since the prototypal evaluation results agreed well to the corresponding reference solutions it is believed that, after reinforcement of PC cluster by increasing number of processing elements, the promising parallel process system can be utilized as a useful tool for advanced structural integrity evaluation.

Functional Haplotypes and Evolutionary Analyses of SBE1 in Collected Rice Germplasm

  • Thant Zin Maung;Yong-Jin Park
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2022년도 추계학술대회
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    • pp.216-216
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    • 2022
  • The starch-branching enzymes (BEs) are responsible for synthesizing the amylopectin, which plays an important role in determining the structural and physical properties of starch granules. BE has two differently functioning isoforms (BEI and BEIIa/b) based on their difference in the chain-length pattern by the degree of polymerization (DP), which mainly contributes to the amylopectin chain length distribution in starch biosynthesis. In this study, we investigated functional haplotypes and evolutionary analyses of SBE1 in 374 rice accessions (320 Korean bred and 54 wild). The analyses were performed based on the classified subpopulations. Haplotype analysis generates a total of 8 haplotypes, of which only four haplotypes were functional carrying four functional SNPs in four different exons of SBE1 on chromosome 6. Nucleotide diversity analysis showed a highest pi-value in aromatic group (0.0029), while the lowest diversity value was in temperate japonica (0.0002), indicating the signal of this gene evolution origin. Different directional selections could be estimated by negative Tajima's D value of temperate japonica (-1.1285) and positive Tajima's D value of tropical japonica (0.9456), where the selective sweeps were undergone by both positive purifying and balancing selections. Phylogenetic analysis indicates a closer relationship of the wild with most of the cultivated subgroups indicating a common ancestor for SBE1 gene. FST-values indicate distant genetic relationships of temperate japonica from all other classified groups. PCA and population structure analysis show an admixed structure of wild and cultivated subpopulations in some proportions.

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Genetic Diversity and Characterization of DPE1 Gene in Rice Germplasm

  • Aueangporn Somsri;Yong-Jin Park
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2022년도 추계학술대회
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    • pp.220-220
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    • 2022
  • Disproportionating Enzyme 1 (DPE1) is an a-1,4-D-glucanotransferase that cleavages the a-1,4-glucosidic bonds and transfers glucosyl groups. In rice endosperm, it participates in starch synthesis by transferring maltooligosyl groups from amylose and amylopectin to amylopectin. Here, we investigated the haplotype variations and evolutionary indices (e.g., genetic diversity and population structure) for the DPE1 gene in 374 rice accessions representing seven subgroups (wild, indica, temperate japonica, tropical japonica, aus, aromatic, and admixture). Variant calling analysis of DPE1 coding regions leads to the identification of six functional haplotypes representing/occupying 8 nonsynonymous SNPs. Nucleotide diversity analysis revealed the highest pi-value in wild group (0.0556) compared to other cultivated groups, of which temperate japonica showed the most reduction of genetic diversity value (0.003). A significant positive Tajima's D value (1.6330) of admixture highlights sudden population contraction under balancing selection, while temperate japonica with the lowest Tajima's D value (-1.3523) showed a selection signature of DPE1 domestication which might be the cause of excess of rare alleles. Moreover, these two subpopulations exhibits a greater differentiation (FST=0.0148), indicating a higher genetic diversity. Our findings on functional DPE1 haplotypes will be useful in future breeding programs, and the evolutionary indices can also be applicable in functional studies of the DPE1 gene.

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Image-to-Image Translation with GAN for Synthetic Data Augmentation in Plant Disease Datasets

  • Nazki, Haseeb;Lee, Jaehwan;Yoon, Sook;Park, Dong Sun
    • 스마트미디어저널
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    • 제8권2호
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    • pp.46-57
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    • 2019
  • In recent research, deep learning-based methods have achieved state-of-the-art performance in various computer vision tasks. However, these methods are commonly supervised, and require huge amounts of annotated data to train. Acquisition of data demands an additional costly effort, particularly for the tasks where it becomes challenging to obtain large amounts of data considering the time constraints and the requirement of professional human diligence. In this paper, we present a data level synthetic sampling solution to learn from small and imbalanced data sets using Generative Adversarial Networks (GANs). The reason for using GANs are the challenges posed in various fields to manage with the small datasets and fluctuating amounts of samples per class. As a result, we present an approach that can improve learning with respect to data distributions, reducing the partiality introduced by class imbalance and hence shifting the classification decision boundary towards more accurate results. Our novel method is demonstrated on a small dataset of 2789 tomato plant disease images, highly corrupted with class imbalance in 9 disease categories. Moreover, we evaluate our results in terms of different metrics and compare the quality of these results for distinct classes.

Haplotyping and Evolutionary Studies on GBSSII Gene in Korean Rice Collection

  • May Htet Аung;Yong-Jin Park
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2022년도 추계학술대회
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    • pp.218-218
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    • 2022
  • Granules-bound starch synthase II (GBSSII), one of the isoforms of granule-bound starch synthase (GBSS), is responsible for amylose synthesis by expressing in non-storage tissues such as leaf, stem, root, and pericarp. Up to date, little is known about this gene functions and basic knowledge of heritable characteristics of this gene, GBSSII. We identified functional haplotypes and performed evolutionary analyses on the GBSSII using 374 rice accessions (320 Korean bred and 54 wild) based on the classified groups. A total of 14 haplotypes were found, and almost all haplotypes (13) were functional, carrying 19 non-synonymous SNPs in two exons (exons 1 and 2). The lowest nucleotide diversity was detected in Tropical japonica (0.00145), while the highest pi-value was in Aus (0.01081), illustrating the signal of this gene evolution. The highest Tajima's D value in Aus (1.6380) indicates GBSSII gene domestication signature under balancing selection, while the lowest Tajima's D value in Temperate japonica (-0.8243) highlights that they were under positive selection, which may be purified due to the excess of rare alleles. The highest genetic differentiation was observed between Tropical japonica and aroma (FST = 0.921928). In contrast, the highest interbreed level was detected in Aus-admixture (FST = -0.20157). The genetic relatedness between and or among the wild and cultivated subpopulations was revealed through PCA, population structure, and phylogenetic analyses.

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