• 한국미생물·생명공학회지
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• 제33권3호
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• pp.215-221
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• 2005

Hexane을 유일 탄소원으로 첨가한 무기염 배지에서 hexane 생분해 속도와 비성장속도를 구하였고, $^{14}C-hexane$을 이용하여 무기화(mineralization) 정도를 측정하였다. 또한, 16S rDNA PCR-DGGE 분석기법을 활용하여 consortium의 미생물 군집 특성을 조사하였다. Consortium CH의 최대 비성장속도 (${\mu}_{max}$)값은 $0.2\;h^{-1}$이고, 최대 hexane 분해속도 ($V_{max}$)와 포화상수 ($K_{s}$)는 각각 460 ${\mu}mol{\cdot}g-DCW^{-1}{\cdot}h^{-1}$ 및 25.87mM 이었다. Consortium CH는 $^{14}C-hexane$의 약 $49.1\%$를 무기화하였고, $43.6{\%}$의 $^{14}C-hexane$는 biomass를 증가시키는데 사용하였다. DGGE band로부터 얻은 clone들은 유류, biphenyl, PCE 및 폐가스 등과 같은 오염물질 분해능을 가진 세균들과 유사성이 가장 높았다. 본 연구에서 얻은 hexane 생분해용 consortium은 향후 hexane 제거용 생물학적 시스템을 개발하는데 유용하게 활용될 수 있다.

• Ocean and Polar Research
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• 제29권4호
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• pp.401-410
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• 2007

국내에서 해양원생동물의 연구는 1990년대 초반에 본격적으로 시작되어 주로 원생동물의 분포와 섭식 등에 관한 연구가 진행되어왔다. 본 논문에서는 마산만 표영 환경에서의 박테리아와 원생동물의 분포, 박테리아와 원생동물의 상호작용과 원생동물과 식물플랑크톤의 상호작용의 특성에 대해 알아보고 앞으로의 연구방향에 대해 토의하였다. 마산만에서 종속영양 미소편모류의 현존량은 평균 $1.2{\times}10^3\;cells\;mL^{-1}$, 종속영양 와편모류는 평균 $7.9{\times}10^4\;cells\;mL^{-1}$, 섬모충류는 평균 $4.0{\times}10^4\;cells\;L^{-1}$로 나타났으며 전반적으로 엽록소-a 농도, 박테리아와 원생동물의 현존량은 유기물 유입이 많은 내만 정점에서 높게 나타났다. 종속영양 미소편모류는 박테리아 이차생산의 약 69%를 제거하는 것으로 나타나 박테리아 생물량을 조절할 것으로 판단되며 소형부유동물은 미소조류 및 박테리아와 양의 상관관계를 보였고 식물플랑크톤에 대한 섭식율(평균 24%)로 인해 이들 생물군집들에게 영향을 주었을 것으로 추정된다. 따라서 마산만에서 원생동물은 박테리아와 미소조류의 성장을 조절하고 이들의 생물량을 상위영양단계로 직접 전달하는 것으로 사료된다. 특히 종속영양 미소편모류는 마산만에서 박테리아의 주 포식자일 것으로 추정된다. 또한 마산만은 후생동물 먹이망보다 미세생물 먹이망이 상당히 잘 발달된 곳으로 추정된다.

• Asian-Australasian Journal of Animal Sciences
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• 제12권1호
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• pp.113-128
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• 1999

Protozoa can represent as half of the total rumen microbial biomass. Around 10 genera are generally present on the same time in the rumen. Based on nutritional aspects they can be divided in large entodiniomorphs, small entodiniomorphs and isotrichs. Their feeding behaviour and their enzymatic activities differ considerably. Many comparisons between defaunated and refaunated animals were carried out during the last two decades to explain the global role of protozoa at the ruminal or animal levels. It is now generally considered that a presence of an abundant protozoal population in the rumen has a negative effect on the amino acid (AA) supply to ruminants and contribute to generate more methane but, nevertheless, protozoa must not be considered as parasites. They are useful for numerous reasons. They stabilise rumen pH when animal are fed diets rich in available starch and decrease the redox potential of rumen digesta. Because cellulolytic bacteria are very sensitive to these two parameters, protozoa indirectly stimulate the bacterial cellulolytic activity and supply their own activity to the rumen microbial ecosystem. They could also supply some peptides in the rumen medium which can stimulate the growth of the rumen microbiota, but this aspect has never been considered in the past. Their high contribution to ammonia production has bad consequences on the urinary nitrogen excretion but means also that less dietary soluble nitrogen is necessary when protozoa are present. Changes in the molar percentages of VFA and gases from rumen fermentations are not so large that they could alter significantly the use of energy by animals. The answer of animals to elimination of protozoa (defaunation) depends on the balance between energy and protein needs of animals and the supply of nutrients supplied through the diet. Defaunation is useful in case of diets short in protein nitrogen but not limited in energy supply for animals having high needs of proteins.

• 공업화학
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• 제27권1호
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• pp.1-9
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• 2016

미세조류와 박테리아의 공배양 시스템은 두 미생물종이 공생적 관계가 있다면 한 배양기에서 BOD와 영양염류의 동시 제거가 가능하다. 이때 영양염류는 미세조류의 바이오매스 성분으로 전환된다. 이 총설은 미세조류와 박테리아의 공생적 혼합배양을 이용한 하폐수처리, 특히 질소와 인의 제거에서의 중요성과 최근의 연구동향을 살펴보았다. 미세조류는 광합성을 통해 산소를 발생시키고 박테리아는 이 산소를 전자수용체로 이용하여 유기물의 산화분해에 활용할 수 있다. 호기성 박테리아가 유기물을 산화할 때 발생되는 $CO_2$는 미세조류의 탄소원으로 섭취되어 탄소동화작용에 사용된다. 미세조류와 박테리아의 공배양은 상호 이익이 될 수도 있고 저해가 될 수도 있으므로 지속적인 영양염류 제거를 위해서는 상호 이익이 되는 공생적 관계가 필수적으로 요구된다. 이를 위해서는 하폐수처리에 사용되는 상용적인 두 미생물 종의 선택이 중요하다.

• Journal of Microbiology and Biotechnology
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• 제26권5호
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• pp.891-899
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• 2016

The recently isolated aniline-degrading bacterium Pseudomonas migulae AN-1 was tagged with green fluorescent protein (GFP) to investigate its bioaugmentation potential against aniline-contaminated groundwater through microcosm experiments. The survival and cellular response of GFP-tagged AN-1 introduced in a lab-scale aquifer corresponded directly with aniline consumption. During the process, the GFP-tagged AN-1 biomass increased from 7.52 × 10⁵ cells/ml to 128 × 10⁵ cells/ml and the degradation rate of aniline was 6.04 mg/l/h. GFP-tagged AN-1 was moderately hydrophobic (41.74%-47.69%) when treated with 20-100 mg/l aniline and exhibited relatively strong hydrophobicity (55.25%-65.78%) when the concentration of aniline was ≥100 mg/l. The membrane permeability of AN-1 increased followed by a rise in aniline below 100 mg/l and was invariable with aniline above 100 mg/l. Pyrosequencing analysis showed that the relative abundance of Proteobacteria (accounted for 99.22% in the non-bioaugmentation samples) changed to 89.23% after bioaugmentation with GFP-tagged AN-1. Actinobacteria increased from 0.29% to 2.01%, whereas the abundance of Firmicutes barely changed. These combined findings demonstrate the feasibility of removing aniline in aquifers by introducing the strain AN-1 and provide valuable information on the changes in the diversity of dominant populations during bioaugmentation.

• Journal of Microbiology and Biotechnology
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• 제30권1호
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• pp.44-53
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• 2020

Calcium is an element that performs many important functions in the human body. A study was conducted on the use of a pulsed electric field (PEF) to enrich cells of Lactobacillus rhamnosus B 442 in calcium ions. The highest concentration of calcium ions in bacterial cells (7.30 mg/g d.m.) was obtained at ion concentration of 200 ㎍/ml of medium and with the use of the following PEF parameters: field strength 3.0 kV/cm, exposure time 10 min, pulse width 75 ms and 20 h of culturing after which bacteria were treated with the field. Cell biomass varied in the range from 0.09 g/g d.m. to 0.252 g/g d.m., and the total number of bacteria ranged from 10¹⁰ CFU/ml to 10¹² CFU/ml. Microscope photographs prove that calcium ions were situated within the cells of the bacteria, and electroporation contributed to an increase in the effectiveness of the ion bioaccumulation process. Samples containing calcium and subjected to electroporation displayed intensive fluorescence. The significance of this research was the possibility of using probiotic bacteria enriched with calcium ions for the production of functional food in subsequent studies.

• Ocean and Polar Research
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• 제26권2호
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• pp.311-321
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• 2004

Relationships between sedimentary environments and abundance of benthic animals were examined on the deep-sea floor, the Clarion-Clipperton Fracture Zone, in the northeast equatorial Pacific Ocean. Specimens were collected using a box corer at 8 stations by sieving through 0.3 mm mesh screen. Sediments showed finer grain size ranged from 5.63 to $7.97{\varphi}$, 83.1% of mean porosity, 1.81 kPa of mean shear strength and organic carbon content in sediment ranged from 0.97 to $1.87\;mg/cm^3$. Manganese nodules covered on the bottom layer from 4 to 57% of coverages. A total of 26 faunal groups in 6 phyla was sampled and comprised 1,467 individuals. Mean biomass were calibrated to 0.5 gWWt/$0.06\;m^2$. Small-sized animals including foraminiferans and nematods were dominated among the faunal group which comprised 49.1% (892 ind.) and 11.5% (320 ind.), respectively. In SPI-analysis, vertical bio-disturbance marks were not observed except to Beggiatoa-type bacterial mats. As the results of relationship between environments and benthos, abundance of benthic animals, especially nematode, showed only a negative correlation to the coverage of nodules, and any other sedimentary factors analyzed in this study were rarely affected to the spatial distribution of benthic animals.

• Journal of Microbiology and Biotechnology
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• 제25권2호
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• pp.178-184
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• 2015

This work aims to utilize wastes from the potato starch industry to produce single-cell protein (SCP) with high lysine content as animal feed. In this work, S-(2-aminoethyl)-_L-cysteine hydrochloride-resistant Bacillus pumilus E1 was used to produce SCP with high lysine content, whereas Aspergillus niger was used to degrade cellulose biomass and Candida utilis was used to improve the smell and palatability of the feed. An orthogonal design was used to optimize the process of fermentation for maximal lysine content. The optimum fermentation conditions were as follows: temperature of 40℃, substrate concentration of 3%, and natural pH of about 7.0. For unsterilized potato starch wastes, the microbial communities in the fermentation process were determined by terminal restriction fragment length polymorphism analysis of bacterial 16S rRNA genes. Results showed that the dominant population was Bacillus sp. The protein quality as well as the amino acid profile of the final product was found to be significantly higher compared with the untreated waste product at day 0. Additionally, acute toxicity test showed that the SCP product was non-toxic, indicating that it can be used for commercial processing.

• Genomics & Informatics
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• 제10권4호
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• pp.249-255
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• 2012

In this study, fosmid cloning strategies were used to assess the microbial populations in water from the International Space Station (ISS) drinking water system (henceforth referred to as Prebiocide and Tank A water samples). The goals of this study were: to compare the sensitivity of the fosmid cloning strategy with that of traditional culture-based and 16S rRNA-based approaches and to detect the widest possible spectrum of microbial populations during the water purification process. Initially, microbes could not be cultivated, and conventional PCR failed to amplify 16S rDNA fragments from these low biomass samples. Therefore, randomly primed rolling-circle amplification was used to amplify any DNA that might be present in the samples, followed by size selection by using pulsed-field gel electrophoresis. The amplified high-molecular- weight DNA from both samples was cloned into fosmid vectors. Several hundred clones were randomly selected for sequencing, followed by Blastn/Blastx searches. Sequences encoding specific genes from Burkholderia, a species abundant in the soil and groundwater, were found in both samples. Bradyrhizobium and Mesorhizobium, which belong to rhizobia, a large community of nitrogen fixers often found in association with plant roots, were present in the Prebiocide samples. Ralstonia, which is prevalent in soils with a high heavy metal content, was detected in the Tank A samples. The detection of many unidentified sequences suggests the presence of potentially novel microbial fingerprints. The bacterial diversity detected in this pilot study using a fosmid vector approach was higher than that detected by conventional 16S rRNA gene sequencing.

• 생태와환경
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• 제46권2호
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• pp.225-233
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• 2013

부영양호 신갈지의 수질개선을 위하여 이미 개발된 천연물질 혼합제(PMC)의 수질개선능(WQI)에 수온변화가 어떠한 영향을 미치는지 현장실험을 실시하였다. 실험결과 식물플랑크톤, BOD, 총인 등은 $20^{\circ}C$ 이하에서는 70% WQI 이상을 보였으나 $25^{\circ}C$ 이상에서는 40% WQI 이하로 오히려 감소하였다. 한편 수온의 증가에 따라 남조류에 대해서는 WQI는 감소하였고, 규조류는 수온변화에 상관없이 90% 이상 높은 WQI를 나타냈으며, 박테리아와 총 질소는 수온과 상관없이 매우 낮은 WQI를 보였다. 이상의 결과들은 PMC의 수질개선능이 수온과 밀접한 관계를 가지며, $25^{\circ}C$ 이상의 고온기에 Microcystis aeruginosa가 우점하는 남조대발생보다 겨울철 저온기에 우점하는 규조류에 더 효과적일 것으로 판단되었다.