• Title/Summary/Keyword: Bacteria fungi

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Characterization of Microorganisms in Eoyukjang (어육장의 미생물학적 특성)

  • Oh, Eu-Jin;Oh, Mi-Hwa;Lee, Jong-Mee;Cho, Mi-Sook;Oh, Sang-Suk
    • Korean Journal of Food Science and Technology
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    • v.40 no.6
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    • pp.656-660
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    • 2008
  • Fermented soybean foods are an important component of the Korean diet. Eoyukjang is a type of traditional fermented soybean source. Microbial analysis of eoyukjang was conducted during the fermentation period in this study. Microorganisms isolated from eoyukjang were identified by biochemical tests and 16S rDNA sequencing. 17 different microorganisms, including bacteria, yeast, and fungi were detected in eoyukjang during the fermentation period. Even though Aspergillus participated in the early stage of fermentation of eoyukjang, Bacillus species and Saccharomyces cerevisiae were the major microzymes in eoyukjang throughout the maturation period. Eoyukjang is generally consumed after the boiling of the final sample. Therefore, the final sample of eoyukjang was boiled and analyzed. Our results showed that no vegetative microorganisms survived under the boiling conditions for eoyukjang. Fermented soybean products in the domestic market were also assessed for comparison with the results from eoyukjang. The total cell number of kanjang (soy sauce) samples was between 0 to 42 CFU/mL. The isolated microorganisms were identified as Bacillus species. All Bacillus isolates were not found to harbor the three enterotoxin-producing and emetic toxin-producing genes.

Inhibition of in Vitro Growth of Three Soil-borne Turfgrass Diseases by Antagonistic Bacteria from Composted Liquid Manure (가축분뇨액비의 길항미생물에 의한 토양전염성 병원균의 생육억제 효과)

  • Ryu, Ju Hyun;Shim, Gyu Yul;Kim, Ki Sun
    • Horticultural Science & Technology
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    • v.32 no.6
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    • pp.879-886
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    • 2014
  • This study was conducted to test in vitro the antagonistic effect of composted liquid manure (CLM) against soil-borne turfgrass pathogenic fungi, Rhizoctonia solani AG-2-2 (IIIB) (brown patch), R. solani AG-2-2 (IV) (large patch), and Sclerotinia homoeocarpa (dollar spot) for environmentally friendly turfgrass management. CLMs were collected from 9 livestock excretion treatment facilities around the country including Gunwi (GW), Hapcheon (HC), Hoengseong (HS), Icheon (IC), Iksan (IS), Muan (MA), Nonsan (NS), and Yeoju (YJ). CLMs of IC, GW, and IS showed s ignificant (p < 0.05) mycelium growth inhibition that was 17.8%, 20.4%, and 48.0% against R. solani AG-2-2 (IIIB), R. solani AG-2-2 (IV), and S. homoeocarpa, respectively. A t otal of 110 bacterial isolates were obtained from the CLMs that showed antagonistic effects. Among them, 5, 4, and 10 microbe isolates showed promising antifungal activity against mycelium growth of R. solani AG-2-2 (IIIB), R. solani AG-2-2 (IV), and S. homoeocarpa, respectively. The bacterial isolates ICIIIB60, GWIV70, and ISSH20 effectively inhibited the mycelial growth of three soil-borne turfgrass pathogens. Selected bacterial isolates were identified as Alcaligenes sp., Bacillus licheniformis Ab2, and B. subtilis C7-3 through 16s rDNA gene sequence analysis. Among 5 fungicides, the most compatible fungicide with ICIIIB60, GWIV70, and ISSH20 was tebuconazol, toclofos-methyl and toclofos-methyl, respectively. These findings suggested that CLMs could be effectively used not only as organic liquid fertilizer sources but also as biological control agents for soil-borne turfgrass diseases such as brown patch, large patch, and dollar spot.

Establishment of Rice Bakanae Disease Management Using Slightly Acidic Hypochlorous Acid Water (미산성 차아염소산수를 이용한 벼키다리 병 방제)

  • Goo, Sung-Geun;Koo, Jachoon
    • Journal of Life Science
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    • v.30 no.2
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    • pp.178-185
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    • 2020
  • Rice bakanae is a typical seed-borne and seed-transmitted disease caused by infection by Fusarium fujikuroi. Seed disinfection using chemical fungicides (such as benomyl and prochloraz) is most effective in controlling the disease, but the emergence of fungicide-resistant strains has recently been increasing. Slightly acidic hypochlorous acid water (SAHW) is a safe and environmentally friendly disinfectant that has a potent and broad spectrum of antimicrobial activity against viruses, bacteria, and fungi. In this study, we aimed to investigate the effectiveness of SAHW against F. fujikuroi strains, including chemical fungicide-resistant strains, as an alternative to conventional chemical fungicides in the management of bakanae disease. SAHW showed strong but similar levels of antifungal activity among the F. fujikuroi strains with a minimum inhibitory concentration (MIC90) of 5±2.5 ppm of free available chlorine (FAC). In addition, F. fujikuroi cells lost viability completely within 5 min of SAHW treatment due to the lethal damage to cell integrity. When the rice seeds infected by F. fujikuroi were treated with SAHW containing 20±10 ppm of FAC for 12 hr, the efficiencies of seed disinfection and disease control were 95-98% and 90.1-92.6%, respectively. Altogether, our data suggest that SAHW is an effective compound for controlling rice bakanae disease.

Study for the Establishment of the Quality Index of Low-salted Myungran-jeot (저염 명란젓갈의 품질지표 설정을 위한 연구)

  • Han Jin-Suk;Cho Hak-Rae;Cho Ho Sung
    • Korean journal of food and cookery science
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    • v.21 no.4 s.88
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    • pp.440-446
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    • 2005
  • To determine the shelf-life of low salted Myungran-jeot (low salted and fermented Alaska pollack roe), various chemical, microbiological and sensory analyses were carried out with Myungran-jeot stored at 10 days. The lactic acid content was slowly increased in the early stage of storage but then was rapidly increased with lengthening storage period, while pH was decreased during storage. The $NH_2-N$ content was steady at 10 days and peaked at 17 days. The production of VBN was increased to over $30mg\%$ at 19 days. In microbiological tests, the viable cell count and halotolerant bacteria were $1.5\times10^3\;and\;5.5\times10^3CFU/g$, respectively, at the initial state, but they slowly increased to $10^7 CFU/g$ at 17 days. Yeast or fungi did not appear on the surface of Myungran-jeot. Sensory evaluation showed that the original torture of Myungran-jeot in the mouth was a very important indicator for acceptability. Sensory characters and acceptability of Myungran-jeot at 17 days were not significantly different from those of the initial state. From these results, the estimated shelf-life of Myungran-jeot whom sealed with aluminum coated paper, was about 18 days in this study.

Inhibitory Effect of $Zn^{+2}$ on Tolaasin-induced Hemolysis ($Zn^{+2}$에 의한 Tolaasin의 용혈활성 저해효과)

  • Cho, Kwang-Hyun;Kim, Sung-Tae;Kim, Young-Kee
    • Applied Biological Chemistry
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    • v.49 no.4
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    • pp.281-286
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    • 2006
  • Tolaasin, a pore-forming toxin, is a 1,985 Da peptide produced by Pseudomonas tolaasii and causes a brown blotch disease on cultivated mushrooms. Tolaasin forms pores on the plasma membrane of various cells including fungi, bacteria, plant as well as erythrocytes, and destroys cell structure. $Zn^{+2}$ has been known to block the tolaasin activity by an unknown mechanism. Thus, we investigated the inhibitory effects of $Zn^{+2}$ on the tolaasin-induced hemolysis to understand the molecular mechanism of tolaasin-induced pore formation. $Zn^{+2}$ and $Cd^{+2}$ inhibited the tolaasin-induced hemolysis in a dose-dependent manner and their Ki values were 170 ${\mu}M$ and 20 mM, respectively. The effect of $Zn^{+2}$ was reversible since the subsequent addition of EDTA chelates $Zn^{+2}$ and removes the inhibitory effect of $Zn^{+2}$. When an osmotic protectant, PEG 2000, was added, the tolaasin-induced hemolysis was not observed. After the removal of osmotic protectant by centrifugation, resuspended erythrocytes with fresh medium were immediately hemolyzed, while the addition of $Zn^{+2}$ prevented from hemolysis, implying that tolaasin-induced pores on the membrane were already formed in the medium containing osmotic protectant. These results suggest that $Zn^{+2}$ inhibits the activity of tolaasin pores and it has minor effects on the membrane binding of tolaasin and the formation of pore.

Establishment of Technology for Preventing the Soybean Sprout Colletotrichum gloeosporioides Rot (열처리에 의한 콩나물 탄저병의 방제)

  • Lee, Jung-Han;Han, Ki-Soo;Kim, Tae-Hyoung;Bae, Dong-Won;Kim, Dong-Kil;Kang, Jin-Ho;Kim, Hee-Kyu
    • Research in Plant Disease
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    • v.13 no.2
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    • pp.110-114
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    • 2007
  • Anthracnose fungus was most pathogenic on soybean sprout, of the fungi and bacteria isolated from rotten sprout on market. Bacterial strains associated were not virulent. Dry heat (DHT) applied even as high as $65^{\circ}C$ for 30min. was not effective enough to eliminate the artificially inoculated Colletotrichum gloeosporioides propagules from seedllots. Hot water immersion treatment (HWT), at elevated temperature of $55^{\circ}C$ for 20 min, did eliminate the pathogen but reduced seed germinating and retarded sprout growth: Seed germination was practically acceptable when the seedlots were exposed to at $55^{\circ}C$ for 5 min, but about 20% anthracnose propagules survived. Accordingly, we have optimized the HWT scheme for 5 min at $60^{\circ}C$. This scheme was validated, at small to large scale production system, that surely rule out the possible carry over of the bacterial contaminant from seedlots. This result should improve the shelf-life of soybean sprout on the market.

A New Frontier for Biological Control against Plant Pathogenic Nematodes and Insect Pests I: By Microbes (식물병원성 해충과 선충 방제의 새지평 I: 미생물)

  • Lee, Hae-Ran;Jung, Jihye;Riu, Myoungjoo;Ryu, Choong-Min
    • Research in Plant Disease
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    • v.23 no.2
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    • pp.114-149
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    • 2017
  • World-wide crop loss caused by insect pest and nematode reaches critical level. In Korea, similar crop loss has been gradually augmented in the field and greenhouse due to continuous crop rotation. The current methods on controlling herbivorous insects and plant parasitic nematodes are mostly depended on agro-chemicals that have resulted additional side-effect including occurrence of resistant insects and nematodes, environmental contamination, and accumulation in human body. To overcome the pitfalls, microbe-based control method have been introduced and applied for several decades. Here, we revised biological control using by the bacteria, fungi, and virus in order to kill insect and nematode and to attenuate its virulence mechanism. The introduced microbes mainly secreted out the hydrolysing enzymes and toxic compounds to target host membrane or cell wall directly. Indirectly, the microbe-triggered plant innate immunity against insects and nematodes was also reported. In conclusion, we provide a new frontier of microbe-based environmentally friendly procedure and effective methods to manage insects and nematodes.

Effect of Organic Fertilizer as Bio-com Application on the Changes of Soil Microorganisms, Gas Evolution, and Mineral-N Transformation in Submerged Condition (유기질비료(有機質肥料) Bio-com 시용(施用)이 토양(土壤)의 미생물상(微生物相) 및 화학성(化學性)에 미치는 영향(影響))

  • Kim, Jeong-Je;Lee, Sang-Kyu
    • Korean Journal of Soil Science and Fertilizer
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    • v.20 no.4
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    • pp.351-357
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    • 1987
  • A laboratory experiment was conducted to find out the effect of organic fertilizer as Bio-com$^{(R)}$ on the changes of pH and Eh values, gas evolution, ammonification and nitrification, and microbial population with farmer's compost and refused mushroom compost in submerged paddy condition. The results obtained are summarized as follows: 1. Application of compost and refused mushroom compost was increased the pH values than that of NPK alone. Organic fertilizer of Bio-com$^{(R)}$ showed the same results of the farmer's compost or refused mushroom compost. 2. Population of soil microbes as bacteria, actinomycetes and fungi was increased by application of compost, refused mushroom compost and Bio-com$^{(R)}$. Moreover, the results were pronounced more with the addition of NPK. 3. The application of Bio-com$^{(R)}$ was effected to the increase of the amount of $NO_3-N$ and the rate of nitrification than NPK, farmer's compost or refused mushroom compost. 4. The amounts of evolved gases as $CH_4$, $CO_2$, and $N_2O$ were not much differed with application of kinds of compost and NPK, but little increasing tendency was observed in application of NPK than that of NPK+kinds of compost.

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Genetic Toxicity Test of 8-Hydroxyquinoline by Ames, Micronucleus, Comet Assays and Microarray Analysis

  • Lee, Woo-Sun;Kim, Hyun-Joo;Lee, Eun-Mi;Kim, Joo-Hwan;Suh, Soo-Kyung;Kwon, Kyung-Jin;Sheen, Yhun-Yong;Kim, Seung-Hee;Park, Sue-N.
    • Molecular & Cellular Toxicology
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    • v.3 no.2
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    • pp.90-97
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    • 2007
  • 8-Hydroxyquinoline is used as antibacterial agent and antioxidant based on its function inducing the chelation of ferrous ion present in host resulting in production of chelated complex. This complex being transported to cell membrane of bacteria and fungi exerts antibacterial and antifungal action. In this study, we have carried out in vitro genetic toxicity tests and microarray analysis to understand the underlying mechanisms and the mode of action of toxicity of 8-hydroxyquinoline. TA1535 and TA98 cells were treated with 8-hydroxyquinoline to test its toxicity by basic genetic toxicity test, Ames and two new in vitro micronucleus and COMET assays were applied using CHO cells and L5178Y cells, respectively. In addition, microarray analysis of differentially expressed genes in L5178Y cells in response to 8-hydroxyquinoline were analyzed using Affymatrix genechip. The result of Ames test was that 8-hydroxyquinoline treatment increased the mutations in base substitution strain TA1535 and likewise, 8-hydroxyquinoline also increased mutations in frame shift TA98. 8-Hydroxyquinoline increased micronuclei in CHO cells and DNA damage in L5178Y. 8-Hdroxyquinoline resulted in positive response in all three tests showing its ability to induce not only mutation but also DNA damage. 783 Genes were initially selected as differentially expressed genes in response to 8-hydroxyquinoline by microarray analysis and 34 genes among them were over 4 times of log fold changed. These 34 genes could be candidate biomarkers of genetic toxic action of 8-hydroxyquinoline related to induction of mutation and/or induction of micronuclei and DNA damage. Further confirmation of these candidate markers related to their biological function will be useful to understand the detailed mode of action of 8-hydroxyquinoline.

Change of Soil Microbial Populations after Forest Fire (산불 발생 후 토양 미생물의 밀도 변화)

  • 박동진;육연수;김종진;이상화;김창진
    • Korean Journal of Microbiology
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    • v.35 no.1
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    • pp.78-81
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    • 1999
  • The change of soil microbial populations was studied at the burnt areas of Mt. Jirisan in Hddong-Gun, Kyungsangnam-Do, where the fire had occurred on Oct. 21 in 1997. On the first day of the fireextinguished, the microbial density (CFUIg dry soil) was investigated at the surface, 5 cm, 10 cm, 20cm, and 30 cm depth of soils. Bacteria at the surface and 5cm depth of burnt sites were estimatedwith the low density level of $10^2$ CFW/g soil comparing to the $10^6$ CFUIg soil of the neighboring unburntsites. Actinomycetes of burnt sites were completely disappeared at the surface, and were estimatedwith the low density level of $10^3$ CFUig soil at thc 5 cm depth comparing to the 10"CFUigsoil at the depth of unburnt sites. Fungi wcrc not isolated at the surface and 5 cm depth at all.However, the rarest lire was not found to decrease the microbial populalions at the lower depths than10 cm. In addilion, the recovery or soil microbial populations following the fire was bimonthly investigatedat the surrace and 5 cm depth. Most of microbial densities at the burnt sites were greatlyincreased two months after the fire, being enough to he compared with the neighboring unburnt sites.However, actinomycetes only at the surface of burnt sites still were estimated the low density level of$10^4$ CFUig soil 4 months after the fire comparing to the $10^6$CFIg soil of unburnt sites.TEX>CFIg soil of unburnt sites.

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