• 제목/요약/키워드: Bacillus sp. A1

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연작재배지토양(連作栽培地土壤)의 식물독소(植物毒素)에 관(關)한 연구(硏究) -제(第) II 보(報). 작물근권토양(作物根圈土壤)의 미생물분포(微生物分布)에 관(關)한 연구(硏究) (Studies on Phytotoxin in Intensively Cultivated Upland Crops -II. Population and identification of soil microorganisms in rhizosphere of upland crops)

  • 이상규;서장선;김영식;박준규
    • 한국토양비료학회지
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    • 제20권2호
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    • pp.179-183
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    • 1987
  • 고추, 마늘, 화훼, 배추및 양파등(等)의 연작지(連作地) 토양(土壤)을 공시(供試)하여 세균(細菌), 사상균(絲狀菌) 및 이들 미생물(微生物)의 분포비율등(分布比率等)을 조사(調査)하기 위하여 실내시험(室內試驗)한 결과(結果)를 요약(要約)하면 다음과 같다. 1. 고추및 마늘 연작지토양(連作地土壤)의 세균(細菌) 및 사상균수(絲狀菌數)는 일반답토양(一般畓土壤)에 비(比)하여 현저(顯著)히 적었다. 2. 연작지토양중(連作地土壤中) 세균(細菌)은 당류(糖類)를 산화(酸化)하여 생육(生育)하는 당류자화성세균(糖類自化性細菌)과 질산환원(窒酸還元)을 가진 세균수(細菌數)가 많았다. 3. 마늘과 토마토 연작지토양중(連作地土壤中)에는 당(糖)의 산화작용(酸化作用)에 의한 Alkali 생성균수(生成菌數)가 많았다. 4. 작물연작지토양(作物連作地土壤)의 근권(根圈)에서는 대체(大體)로 Pseudomonas, Xanthomonas, Bacillus, Achromobacter 속(屬)의 세균(細菌)이 그리고 사상균(絲狀菌)은 Penicillium속(屬)이 가장 많았으며, 다음은 Phoma, Humicola 및 Aspergillus속(屬)의 균주(菌株)였다. 5. 전공시토양(全供試土壤)에서 식물독소생성균(植物毒素生成菌)인 Stachybotris속(屬)의 사상균(絲狀菌)이 분리(分離)되었다.

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Identification, Fermentation, and Bioactivity Against Xanthomonas oryzae of Antimicrobial Metabolites Isolated from Phomopsis longicolla S1B4

  • Lim, Chae-Sung;Kim, Ji-Young;Choi, Jung-Nam;Ponnusamy, Kannan;Jeon, Yul-Taek;Kim, Soo-Un;Kim, Jeong-Gu;Lee, Choong-Hwan
    • Journal of Microbiology and Biotechnology
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    • 제20권3호
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    • pp.494-500
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    • 2010
  • Bacterial blight, an important and potentially destructive bacterial disease in rice, is caused by Xanthomonas oryzae. Recently, this organism has developed resistance to available antibiotics, prompting scientists to find a suitable alternative. This study focused on secondary metabolites of Phomopsis longicolla to target X. oryzae. Five bioactive compounds were isolated by activity-guided fractionation from ethyl acetate extracts of mycelia and were identified by LC/MS and NMR spectroscopy as dicerandrol A, dicerandrol B, dicerandrol C, deacetylphomoxanthone B, and fusaristatin A. This is the first time fusaristatin A has been isolated from Phomopsis sp. Deacetylphomoxanthone B showed a higher antibacterial effect against X. oryzae KACC 10331 than the positive control (2,4-diacetyphloroglucinol). Dicerandrol A also showed high antimicrobial activity against Gram-positive bacteria (Staphylococcus aureus, Bacillus subtilis) and yeast (Candida albicans). In addition, high production yields of these compounds were obtained at the stationary and death phases.

해양 생물에서 분리된 Phaeobacter inhibens KJ-2의 항균 활성 (Examination of Antimicrobial Activity by Phaeobacter inhibens KJ-2 Isolated from a Marine Organism)

  • 김윤범;김동휘;허문수
    • 생명과학회지
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    • 제27권10호
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    • pp.1161-1167
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    • 2017
  • 본 연구는 양식업에 막대한 경제적인 손실을 야기시키는 세균성 어류질병인 Vibrio anguillarum을 예방하고 억제하기 위한 목적을 두고, 제주 연안에 서식하는 군소 알로부터 특징적인 균주를 분리 하였다. 이를 16S rRNA 염기서열 분석, 형태학적 특성을 통해 균을 동정하여 Phaeobacter inhibens KJ-2로 명명하였다. Phaeobacter inhibens KJ-2 균주는 Vibrio sp.에 대해 강한 항균 활성을 갖고 있으며, 항균물질의 생산특성을 배양조건에 따라 검토하였으며, 그 결과 진탕 배양의 경우 $20^{\circ}C$에서 24시간 배양 후, 정치 배양의 경우 96시간 배양 후 항균 활성이 가장 높게 나타났다. 진탕 배양 및 정치 배양 모두 4시간 후부터 생육도는 낮았으나 항균 물질 생산을 시작하였다. 생육도가 거의 없는데도 불구하고 항균물질이 생산이 이루어졌는데, 이는 QS (Quorum Sensing)의 신호 물질인 AHLs과 관련이 있다고 사료되며, AHLs의 생성능은 항균 활성과 거의 일치함을 알 수 있었다. 이런 배양특성을 바탕으로 항균 활성을 검토한 결과 V. anguillarum외 다른 Vibrio sp.에 대해서도 항균활성을 나타내었다. 특히 Vibrio vulnificus, Vibrio campbellii, Vibrio mimicus에 대해 높은 저해능을 나타내었다.

신선 채소류의 부패에 따른 세균의 다양성 변화 및 세균에 의한 채소 부패 조사 (Changes of Bacterial Diversity Depend on the Spoilage of Fresh Vegetables)

  • 이동환;유정일;박소연;노은정;오창식;정규석;윤종철;허성기
    • 식물병연구
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    • 제17권1호
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    • pp.38-43
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    • 2011
  • 채소류가 소비되기까지 약 10~30%에 이르는 양이 부패에 의해 버려지고 있다. 채소류는 수확 후 수많은 세균이나 곰팡이와 같은 다양한 미생물들에 의해 부패가 이루어진다. 채소류의 부패와 세균과의 관계를 알아보고자 세균의 다양성에 관한 조사를 하였다. 신선한 상추와 깻잎, 치커리에서의 총 호기성 균 수는 각각 $2.6{\sim}2.7{\times}10^6$, $4.6{\times}10^5$, $1.2{\times}10^6\;CFU/g$ of fresh weight이었으며, Pseudomonas spp., Alysiella spp., Burkholderia spp.와 그 외의 18개의 다양한 속들이 확인되었다. 신선한 채소류를 $28^{\circ}C$에서 일주일 동안 배양하였을 때 세균 다양성에 변화가 생겼다. 총 호기성 균의 수는 상추와 깻잎, 치커리에 대하여 각각 $1.1{\sim}4.6{\times}10^8$, $4.9{\times}10^7$, $7.6{\times}10^8\;CFU/g$ of fresh weight로 나타났으며, 이는 약 $10^2$배 정도 증가한 수치이다. 하지만 세균 다양성은 단순해져서 보다 적은 수의 세균이 분리, 동정되었다. Pseudomonas spp.가 대부분을 차지하였으며(~48%), Arthrobacter sp., Bacillus sp.가 그 뒤를 이었다. 동정된 세균 각각의 부패능을 검정하고자 무균배양한 상추에 접종하였으며, 그 결과 Pseudomonas fluorescence와 Pantoea agglomerans가 상당한 부패를 야기하였다.

Molecular and Biochemical Characterization of a Novel Intracellular Low-Temperature-Active Xylanase

  • Zhou, Junpei;Dong, Yanyan;Tang, Xianghua;Li, Junjun;Xu, Bo;Wu, Qian;Gao, Yajie;Pan, Lu;Huang, Zunxi
    • Journal of Microbiology and Biotechnology
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    • 제22권4호
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    • pp.501-509
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    • 2012
  • A 990 bp full-length gene (xynAHJ2) encoding a 329-residue polypeptide (XynAHJ2) with a calculated mass of 38.4 kDa was cloned from Bacillus sp. HJ2 harbored in a saline soil. XynAHJ2 showed no signal peptide, distinct amino acid stretches of glycoside hydrolase (GH) family 10 intracellular endoxylanases, and the highest amino acid sequence identity of 65.3% with the identified GH 10 intracellular mesophilic endoxylanase iM-KRICT PX1-Ps from Paenibacillus sp. HPL-001 (ACJ06666). The recombinant enzyme (rXynAHJ2) was expressed in Escherichia coli and displayed the typical characteristics of low-temperature-active enzyme (exhibiting optimum activity at $35^{\circ}C$, 62% at $20^{\circ}C$, and 38% at $10^{\circ}C$; thermolability at ${\geq}45^{\circ}C$). Compared with the reported GH 10 low-temperature-active endoxylanases, which are all extracellular, rXynAHJ2 showed low amino acid sequence identities (<45%), low homology (different phylogenetic cluster), and difference of structure (decreased amount of total accessible surface area and exposed nonpolar accessible surface area). Compared with the reported GH 10 intracellular endoxylanases, which are all mesophilic and thermophilic, rXynAHJ2 has decreased numbers of arginine residues and salt bridges, and showed resistance to $Ni^{2+}$, $Ca^{2+}$, or EDTA at 10 mM final concentration. The above mechanism of structural adaptation for low-temperature activity of intracellular endoxylanase rXynAHJ2 is different from that of GH 10 extracellular low-temperature-active endoxylanases. This is the first report of the molecular and biochemical characterizations of a novel intracellular low-temperature-active xylanase.

Free Radical Scavenging Activity of Methanol Extracts of Chungkukjang

  • Seo, Kyoung-Chun;Noh, Jeong-Sook;Yi, Na-Ri;Choi, Ji-Myung;Cho, Eun-Ju;Han, Ji-Sook;Song, Yeong-Ok
    • Preventive Nutrition and Food Science
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    • 제13권2호
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    • pp.77-83
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    • 2008
  • To further the goal of isolating Bacillus sp. from commercial chungkukjang (CKJ) for a development of a probiotic dietary adjunct using soymilk or milk, antioxidant activity of CKJ purchased from the Sunchang Traditional Village in Chunbook province was examined. Six CKJ samples were evaluated and 3 were selected based on the results of the physicochemical analysis and sensory evaluation for further antioxidant study. $IC_{50}$ for DPPH scavenging activity of methanol extracts of CKJ ranged from 238.1 to 345.7 ${\mu}g/mL$. CKJ exhibited over 80% scavenging of ${\cdot}OH$ and ONOO- at concentrations of 100 ${\mu}g/mL$ and 250 ${\mu}g/mL$, respectively. $O_2^-$ and NO scavenging activities of three CKJ were increased in a dose dependent manner with the concentration tested from 100 to 1000 ${\mu}g/mL$. In this study, the methanol extract of CKJ exhibited a great reduction capability and powerful free radical scavenging activity, especially against OH. and ONOO-, which are the most toxic radicals responsible for oxidative damage in the body. However, radical scavenging effects of CKJ on DPPH, $O_2^-$, and nitrite radical were rather moderate. In conclusion, CKJ may reduce the oxidative stress in the body by scavenging the free radicals.

지의류 추출물의 구강세균에 대한 항균효과 (Antimicrobial activities of oral bacteria by lichen extracts)

  • 김은미;조민정
    • 한국치위생학회지
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    • 제12권1호
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    • pp.81-91
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    • 2012
  • Objectives : By investigating antimicrobial activity of natural extracts, identifying its usefulness as antibiotic material to oral bacteria. Methods : Antimicrobial activity tests of 25 natural extracts were implemented on 6 type strains alleged to cause dental caries and 10 clinical strains isolated and identified from dental caries. Results : Among medicinal plants, Coptis japonica, Scutellaria baicalensis, Dictamnus dasycarpus showed antimicrobial activity. Among lichens, 3 methanol extracts and 6 acetone extracts showed antimicrobial activity. Minimum Inhibitory Concentration(MIC) test of Usnea aurantiacoatra KoLRI 004184, an acetone extract of lichen with the highest antimicrobial activity, on 6 type strains involved in dental caries and 10 strains isolated from dental caries resulted as follows; Actinomyces oris 1041 $12{\mu}g/ml$, for Corynebacterium durum 3151 $13{\mu}g/ml$, for Rothia dentocariosa KCTC $3204^T$ $14{\mu}g/ml$, for R. dentocariosa 911 $15{\mu}g/ml$, for R. dentocariosa 1822 $12{\mu}g/ml$, for Lacto-bacillus casei KACC $12413^T$ $12{\mu}g/ml$, for L. acidophilus KACC $12419^T$ $16{\mu}g/ml$, for L. rhamnosus 2421 $15{\mu}g/ml$, for Streptococcus mutans KCTC $3065^T$ $15{\mu}g/ml$, for S. mutans 121 $13{\mu}g/ml$, for Streptococcus oralis 2221 $18{\mu}g/ml$, for S. salivarius KCTC 5512 $14{\mu}g/ml$, for S. salivarius 122 $12{\mu}g/ml$, for S. sanguinis KCTC $3284^T$ $14{\mu}g/ml$, for S. sanguinis 912 $14{\mu}g/ml$, for Neisseria sp. KEM232 $12{\mu}g/ml$. Conclusions : Even a small amount of extract from lichen Usnea aurantiacoatra KoLRI 004184 showed very high level of antimicrobial activation against all 16 bacterial strains involved in dental caries.

Meta-analysis Reveals That the Genus Pseudomonas Can Be a Better Choice of Biological Control Agent against Bacterial Wilt Disease Caused by Ralstonia solanacearum

  • Chandrasekaran, Murugesan;Subramanian, Dharaneedharan;Yoon, Ee;Kwon, Taehoon;Chun, Se-Chul
    • The Plant Pathology Journal
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    • 제32권3호
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    • pp.216-227
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    • 2016
  • Biological control agents (BCAs) from different microbial taxa are increasingly used to control bacterial wilt caused by Ralstonia solanacearum. However, a quantitative research synthesis has not been conducted on the role of BCAs in disease suppression. Therefore, the present study aimed to meta-analyze the impacts of BCAs on both Ralstonia wilt disease suppression and plant (host) growth promotion. The analysis showed that the extent of disease suppression by BCAs varied widely among studies, with effect size (log response ratio) ranging from -2.84 to 2.13. The disease incidence and severity were significantly decreased on average by 53.7% and 49.3%, respectively. BCAs inoculation also significantly increased fresh and dry weight by 34.4% and 36.1%, respectively on average. Also, BCAs inoculation significantly increased plant yield by 66%. Mean effect sizes for genus Pseudomonas sp. as BCAs were higher than for genus Bacillus spp. Among antagonists tested, P. fluorescens, P. putida, B. cereus, B. subtilis and B. amyloliquefaciens were found to be more effective in general for disease reduction. Across studies, highest disease control was found for P. fluorescens, annual plants, co-inoculation with more than one BCA, soil drench and greenhouse condition were found to be essential in understanding plant responses to R. solanacearum. Our results suggest that more efforts should be devoted to harnessing the potential beneficial effects of these antagonists, not just for plant growth promoting traits but also in mode of applications, BCAs formulations and their field studies should be considered in the future for R. solanacearum wilt disease suppression.

RBC와 점감포기조의 복합구성에 따른 유가공폐수 처리에 관한 연구 (Treatment of Dairy Wastewater by the Combination of RBC and tapered Aeration)

  • 이상호
    • 한국산학기술학회논문지
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    • 제9권6호
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    • pp.1733-1738
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    • 2008
  • 고농도 유가공폐수의 유기물 및 질소, 인의 제거효율을 비교하기 위하여 두 개의 반응 시스템을 구성하였다. 하나는 하나의 RBC 반응조와 3단 점감포기조로 구성한 시스템이며 다른 하나는 RBC 반응조 2개를 연속으로 구성하고 3단 점감포기조로 구성한 시스템이다. 본 연구에 적용한 바실러스 미생물은 RBC의 끈상미생물접촉재에 부착하여 수행하였다. 각 시스템으로 유입되는 유가공폐수의 BOD 평균농도는 988mg/L, 1,046mg/L이었으며, 유출수 BOD 농도는 21.4mg/L, 15.9mg/L로 제거율은 97.8%, 98.5%의 결과를 보였다. RBC 단일공정 유입수의 평균 $COD_{cr}$ 농도는 1,837mg/L, 유출수는 53.0mg/L로 96.7%의 제거 효율을 보였으며 RBC 연속공정 유입수의 평균 $COD_{cr}$ 농도는 1,852mg/L, 유출수는 평균 27.8mg/L로 98.5%의 제거효율을 보였다. 유입수 T-N 분석결과 RBC 단일공정은 평균 51.9mg/L로 측정되었고, RBC 연속반응공정에서의 유입수 평균은 54.3mg/L이었으며, 유출수는 각각 6.6mg/L, 4.7mg/L로 87.2%, 91.3%의 제거효율을 보였다. T-P에 대한 RBC 단일공정과 RBC 연속공정에서의 분석 결과 유입수 평균농도는 각각 8.9mg/L, 9.1mg/L로 측정되었고, 유출수 농도는 1.6mg/L, 1.0mg/L로 T-P 제거율은 82%, 89%로 나타났다.

Brief Introduction of Research Progresses in Control and Biocontrol of Clubroot Disease in China

  • He, Yueqiu;Wu, Yixin;He, Pengfei;Li, Xinyu
    • 한국균학회소식:학술대회논문집
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    • 한국균학회 2015년도 춘계학술대회 및 임시총회
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    • pp.45-46
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    • 2015
  • Clubroot disease of crucifers has occurred since 1957. It has spread to the whole China, especially in the southwest and nourtheast where it causes 30-80% loss in some fields. The disease has being expanded in the recent years as seeds are imported and the floating seedling system practices. For its effective control, the Ministry of Agriculture of China set up a program in 2010 and a research team led by Dr. Yueqiu HE, Yunnan Agricultural University. The team includes 20 main reseachers of 11 universities and 5 institutions. After 5 years, the team has made a lot of progresses in disease occurrence regulation, resources collection, resistance identification and breeding, biological agent exploration, formulation, chemicals evaluation, and control strategy. About 1200 collections of local and commercial crucifers were identified in the field and by artificiall inoculation in the laboratories, 10 resistant cultivars were breeded including 7 Chinese cabbages and 3 cabbages. More than 800 antagostic strains were isolated including bacteria, stretomyces and fungi. Around 100 chemicals were evaluated in the field and greenhouse based on its control effect, among them, 6 showed high control effect, especially fluazinam and cyazofamid could control about 80% the disease. However, fluzinam has negative effect on soil microbes. Clubroot disease could not be controlled by bioagents and chemicals once when the pathogen Plasmodiophora brassicae infected its hosts and set up the parasitic relationship. We found the earlier the pathogent infected its host, the severer the disease was. Therefore, early control was the most effective. For Chinese cabbage, all controlling measures should be taken in the early 30 days because the new infection could not cause severe symptom after 30 days of seeding. For example, a biocontrol agent, Bacillus subtilis Strain XF-1 could control the disease 70%-85% averagely when it mixed with seedling substrate and was drenching 3 times after transplanting, i.e. immediately, 7 days, 14 days. XF-1 has been deeply researched in control mechanisms, its genome, and development and application of biocontrol formulate. It could produce antagonistic protein, enzyme, antibiotics and IAA, which promoted rhizogenesis and growth. Its The genome was sequenced by Illumina/Solexa Genome Analyzer to assembled into 20 scaffolds then the gaps between scaffolds were filled by long fragment PCR amplification to obtain complet genmone with 4,061,186 bp in size. The whole genome was found to have 43.8% GC, 108 tandem repeats with an average of 2.65 copies and 84 transposons. The CDSs were predicted as 3,853 in which 112 CDSs were predicted to secondary metabolite biosynthesis, transport and catabolism. Among those, five NRPS/PKS giant gene clusters being responsible for the biosynthesis of polyketide (pksABCDEFHJLMNRS in size 72.9 kb), surfactin(srfABCD, 26.148 kb, bacilysin(bacABCDE 5.903 kb), bacillibactin(dhbABCEF, 11.774 kb) and fengycin(ppsABCDE, 37.799 kb) have high homolgous to fuction confirmed biosynthesis gene in other strain. Moreover, there are many of key regulatory genes for secondary metabolites from XF-1, such as comABPQKX Z, degQ, sfp, yczE, degU, ycxABCD and ywfG. were also predicted. Therefore, XF-1 has potential of biosynthesis for secondary metabolites surfactin, fengycin, bacillibactin, bacilysin and Bacillaene. Thirty two compounds were detected from cell extracts of XF-1 by MALDI-TOF-MS, including one Macrolactin (m/z 441.06), two fusaricidin (m/z 850.493 and 968.515), one circulocin (m/z 852.509), nine surfactin (m/z 1044.656~1102.652), five iturin (m/z 1096.631~1150.57) and forty fengycin (m/z 1449.79~1543.805). The top three compositions types (contening 56.67% of total extract) are surfactin, iturin and fengycin, in which the most abundant is the surfactin type composition 30.37% of total extract and in second place is the fengycin with 23.28% content with rich diversity of chemical structure, and the smallest one is the iturin with 3.02% content. Moreover, the same main compositions were detected in Bacillus sp.355 which is also a good effects biocontol bacterial for controlling the clubroot of crucifer. Wherefore those compounds surfactin, iturin and fengycin maybe the main active compositions of XF-1 against P. brassicae. Twenty one fengycin type compounds were evaluate by LC-ESI-MS/MS with antifungal activities, including fengycin A $C_{16{\sim}C19}$, fengycin B $C_{14{\sim}C17}$, fengycin C $C_{15{\sim}C18}$, fengycin D $C_{15{\sim}C18}$ and fengycin S $C_{15{\sim}C18}$. Furthermore, one novel compound was identified as Dehydroxyfengycin $C_{17}$ according its MS, 1D and 2D NMR spectral data, which molecular weight is 1488.8480 Da and formula $C_{75}H_{116}N_{12}O_{19}$. The fengycin type compounds (FTCPs $250{\mu}g/mL$) were used to treat the resting spores of P. brassicae ($10^7/mL$) by detecting leakage of the cytoplasm components and cell destruction. After 12 h treatment, the absorbencies at 260 nm (A260) and at 280 nm (A280) increased gradually to approaching the maximum of absorbance, accompanying the collapse of P. brassicae resting spores, and nearly no complete cells were observed at 24 h treatment. The results suggested that the cells could be lyzed by the FTCPs of XF-1, and the diversity of FTCPs was mainly attributed to a mechanism of clubroot disease biocontrol. In the five selected medium MOLP, PSA, LB, Landy and LD, the most suitable for growth of strain medium is MOLP, and the least for strains longevity is the Landy sucrose medium. However, the lipopeptide highest yield is in Landy sucrose medium. The lipopeptides in five medium were analyzed with HPLC, and the results showed that lipopeptides component were same, while their contents from B. subtilis XF-1 fermented in five medium were different. We found that it is the lipopeptides content but ingredients of XF-1 could be impacted by medium and lacking of nutrition seems promoting lipopeptides secretion from XF-1. The volatile components with inhibition fungal Cylindrocarpon spp. activity which were collect in sealed vesel were detected with metheds of HS-SPME-GC-MS in eight biocontrol Bacillus species and four positive mutant strains of XF-1 mutagenized with chemical mutagens, respectively. They have same main volatile components including pyrazine, aldehydes, oxazolidinone and sulfide which are composed of 91.62% in XF-1, in which, the most abundant is the pyrazine type composition with 47.03%, and in second place is the aldehydes with 23.84%, and the third place is oxazolidinone with 15.68%, and the smallest ones is the sulfide with 5.07%.

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