• Asian-Australasian Journal of Animal Sciences
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• 제18권7호
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• pp.942-948
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• 2005

New polymorphism of major histocompatibility complex B-G genes was investigated by amplification and digestion of a 401bp fragment including intron 1 and exon 2 using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) technique with two restriction enzymes of Msp I and Tas I in eight breeds of Chinese indigenous chickens and one exotic breed. In the fragment region of the gene, three novel single nucleotide polymorphisms (SNPs) were detected at the two restriction sites. We found the transition of two nucleotides of A294G and T295C occurred at Tas I restriction site, and consequently led to a non-synonymous substitution of asparagine into serine at position 54 within the deduced amino acid sequence of immunoglobulin variable-region-like domain encoded by the exon 2 of B-G gene. It was observed at rare frequency that a single mutation of A294G occurring at the site, also caused an identical substitution of amino acid, asparagine 54-to-serine, to that we described previously. And the transversion of G319C at Msp I site led to a non-synonymous substitution, glutamine 62-to-histidine. The new alleles and allele frequencies identified by the PCR-RFLP method with the two enzymes were characterized, of which the allele A and B frequencies at Msp I and Tas I loci were given disequilibrium distribution either in the eight Chinese local breeds or in the exotic breed. By comparison, allele A at Msp I locus tended to be dominant, while, the allele B at Tas I locus tended to be dominant in all of the breeds analyzed. In Tibetan chickens, the preliminary association analysis revealed that no significant difference was observed between the different genotypes identified at the Msp I and Tas I loci and the laying performance traits, respectively.

• Journal of Microbiology and Biotechnology
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• 제25권1호
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• pp.98-108
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• 2015

Staphylococcus aureus is an important foodborne pathogen that causes diverse diseases ranging from minor infections to life-threatening conditions in humans and animals. To further understand its pathogenesis, the genome of the strain S. aureus FORC_001 was isolated from a contaminated food. Its genome consists of 2,886,017 bp double-stranded DNA with a GC content of 32.8%. It is predicted to contain 2,728 open reading frames, 57 tRNAs, and 6 rRNA operons, including 1 additional 5S rRNA gene. Comparative phylogenetic tree analysis of 40 complete S. aureus genome sequences using average nucleotide identity (ANI) revealed that strain FORC_001 belonged to Group I. The closest phylogenetic match was S. aureus MRSA252, according to a whole-genome ANI (99.87%), suggesting that they might share a common ancestor. Comparative genome analysis of FORC_001 and MRSA252 revealed two non-homologous regions: Regions I and II. The presence of various antibiotic resistance genes, including the SCCmec cluster in Region I of MRSA252, suggests that this strain might have acquired the SCCmec cluster to adapt to specific environments containing methicillin. Region II of both genomes contains prophage regions but their DNA sequence identity is very low, suggesting that the prophages might differ. This is the first report of the complete genome sequence of S. aureus isolated from a real foodborne outbreak in South Korea. This report would be helpful to extend our understanding about the genome, general characteristics, and virulence factors of S. aureus for further studies of pathogenesis, rapid detection, and epidemiological investigation in foodborne outbreak.

• 한국식품과학회지
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• 제44권5호
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• pp.600-606
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• 2012

콩을 소재로한 전통 발효식품으로부터 혈전용해능이 뛰어난 균주를 분리하였으며, B. subtilis로 동정되었다. 따라서 이를 B. subtilis IDCC 9204(특허균주기탁: KCTC-11471 BP), 그 혈전용해 효소는 NK-IL9204로 명명하였다. B. subtilis IDCC 9204가 생산하는 고역가의 NK-IL9204를 단백질 분석법에 기초하여 분석한 결과, 분자량은 27.7 kDa의 homogenous enzyme으로 확인되었다. 또한 기존에 알려진 일본의 발효식품인 낫도 유래의 B. subtilis var. natto가 생산하는 nattokinase 와의 sequence 분석을 진행한 결과, 99.5% homology가 일치하는 serine protease계열의 nattokinase로 확인되었다. 그러나 NK-IL9204는 물리 화학적인 조건에서 B. subtilis var. natto가 생산하는 nattokinase와 다소 차이를 나타내었으며 본 실험에서는 B. subtilis var. natto가 생산하는 nattokinase보다 상대적으로 높은 열 안정성과 pH 안정성을 나타내었다. In vitro 실험에서 NK-IL9204는 최적 반응온도 $40^{\circ}C$, 열 안정성은 $90^{\circ}C$까지 효소활성을 유지하였으며, 최적 반응 pH는 pH 8로 알칼리-혈전용해효소의 특성을 나타내었으며, 약산성에서 강알칼리 영역까지 넓은 pH 구간 안정성을 갖는 것이 특징이다. NKIL9204의 in vivo에서의 효능과 생체 내 안정성을 동물실험을 통해 확인한 결과, 생체 내에서도 혈전용해효소의 활성이 소실되지 않고 유지되며, 혈전분해와 관련된 생체 내 인자들을 활성화시키는 역할을 하는 특징을 갖는다. NK-IL9204는 30,000 FU/g 이상의 고역가를 달성하여 산업적 측면에서 생산성도 확보함으로써 수입의존적 원료를 국산화할 수 있을 것으로 예상된다.

• Asian-Australasian Journal of Animal Sciences
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• 제19권2호
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• pp.153-159
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• 2006

A 2,656 bp fragment of chicken ghrelin gene was cloned and SNPs were detected by PCR-RFLP and Allele Specific PCR (ASP) in 12 Chinese indigenous chicken breeds and a commercial chicken population. The results showed that there were 23 base variations and an amino acid change ($Gln{\rightarrow}Arg$) in cloned chicken ghrelin gene. Three SNPs were confirmed in 13 populations and associations between this gene and growth traits of Tibetan chicken (TC) and Recessive White chicken (RW) were investigated. The results of haplotype analysis revealed that 26 haplotype genotypes were composed of eight haplotypes. The results of $x^2$ tests indicated that there were significant differences between genotypes or haplotype genotype frequencies in some of the breeds or sexes at 0.05 or 0.01 levels. The results of ANOVA revealed that there were significant differences between genotypes or haplotype genotypes on some growth traits of TC and RW chicken breeds at 0.05 or 0.01 levels. Multiple comparisons showed that there were significant associations between genotype CT at site 71 and some growth traits of two chicken breeds and between genotype AG at site 1,215 and body weight at 16 wk of two chicken breeds, and there was a significant association between haplotype genotype CAA/CAG and body weight and shank girth at 16 wk of two chicken breeds.

• 대한의용생체공학회:의공학회지
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• 제28권2호
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• pp.178-186
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• 2007

This study is attempted to correct an error of electronic blood pressure meter with an optical sensor. In general, for a hospitalized patient, ECG, blood pressure, oxygen saturation, and respiration are basically measured to monitor the patient's condition. Opening of a blood vessel after it is occluded by pressurizing the cuff influences the blood flow of peripheral blood vessels as well as oscillation changes in the cuff. Blood vessels are occluded and peripheral blood flow disappears at cuff pressure above the examinee's blood pressure, while blood vessels are opened and peripheral blood flow appears again at cuff pressure under the examinee's blood pressure. Then Disappear-Appear Point Length(DAPL) of peripheral blood flow can be judged with the signal of peripheral blood flow, thus is available as a factor of error correction for electronic blood pressure meter. Also, systolic or diastolic blood pressure can be corrected with Appear-Point-Pressure(APP) of cuff pressure at a point where blood flow occurs and Appear-Maximum Pressure(AMP) of cuff pressure at the maximum amplitude point of peripheral blood flow after peripheral blood flow appears again. For verification, 27 examinees were selected, and their blood value was obtained through experimental procedure of 4 stages including induction of blood pressure change. The examinees were divided into two groups of experimental group and control group, regression analysis was conducted for experimental group, and correction of a blood pressure error was verified with optical signal by applying the regression equation calculated in experimental group to control group. As an experimental result, mean of the whole measurement errors was 5mmHg or more, which did not meet the standard fur blood pressure meter. As a result of correcting blood pressure measurements with data of DAPL, APP, and AMP as drawn out of PPG signal, systolic blood pressure, mean blood pressure, and diastolic blood pressure were $-0.6{\pm}4.4mmHg,\;-1.0{\pm}3.9mmHg$ and $-1.3{\pm}5.4mmHg$, respectively, indicating that mean of the whole measurement errors was greatly improved, and standard deviation was decreased.

• 한국환경보건학회지
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• 제42권1호
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• pp.53-60
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• 2016

Objectives: Preservatives are commonly used in pharmaceuticals, cosmetics and other products to extend the expiration date and prevent the growth of microorganisms. Preservatives are generally effective in controlling mold and inhibiting yeast growth, and against a wide range of bacterial attacks as well. They also adversely affect the quality of sperm and cause precocious puberty in children. This study was performed to analyze seven preservatives used in pharmaceuticals and personal care products. Methods: Five kinds of pharmaceuticals and personal care products (PPCPs) were examined for analysis with a high performance liquid chromatography-diode array detector. Each sample was homogenized and the targeted compounds were extracted with methanol. The suspended particulate was removed by syringe filter. Next, the sample was injected into an HPLC system. The separation of the seven preservatives was achieved with a C18 column and gradient mode. The accuracies were between 73% and 120% and precision was lower than 11.58% (RSD). Results: All of the calibration curves showed good linearity with a coefficient of determination ($r^2$) over 0.999. Among the PPCP samples, the detection rate of preservatives was 32.5% for pharmaceuticals, 44.8% for toothpaste, 76.9% for mouthwash, 40.0% for body lotion and 56.0% for wet tissues. The average concentrations of the preservatives in PPCPs were BA 1141.0 mg/kg, MP 709.8 mg/kg, EP 624.9 mg/kg, PP 216.9 mg/kg, BP 167.8 mg/kg, and TCS 538.2 mg/kg. The most frequently detected preservatives in pharmaceuticals and personal care products were BA, MP and PP. The concentrations of preservatives exceeded Korean regulatory standards in 11 samples of medicines, three of mouthwash and two of body lotion. Conclusion: We found that most of the PPCP samples contained various preservatives. It is necessary to identify which preservatives were used and to determine the level of preservatives in PPCPs and to assess the health risk to susceptible populations such as children.

• Applied Biological Chemistry
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• 제50권2호
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• pp.95-100
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• 2007

식물성장 촉진호르몬인 auxin, 식물병원성 진균을 방제하는 siderophore 그리고 cellulase를 동시에 생산하는 PGPR균이자 생물방제균인 Bacillus licheniformis K11의 cellulase의 유전자를 PCR을 이용해 pUC18에 재조합 후 E. coli DH5${\alpha}$에 cloning하였으며, 이 형질전환 된 균주를 E. coli DH5${\alpha}$(pCW 77)라 하였다. 형질전환 균주 E. coli DH5${\alpha}$(pCW 77)는 B. licheniformis K11의 1.6kb 유전자를 포함하며, 이 cellulase는 1,479 bp, 499개의 amino acid가 암호화된 것으로 추정된다. 형질전환균주가 생산하는 cellulase(CelW)는 lac 프로모터를 이용해 발현되었으며, CMC-SDS-PAGE의 방법으로 약 55 kDa의 분자량을 확인하였다. B. licheniformis K11의 cellulase는 4종의 대표적인 Bacillus spp. 들이 생산하는 cellulase의 아미노산 배열이 97% 이상 일치하였다. CelW는 carboxymethyl-cellulose(CMC) 뿐만 아니라 불용성 섬유소인 Avicel, Filter paper(Whatman$^{\circledR}$ No. 1)는 물론이고 고추역병균 P. capsici의 건조 cell wall도 분해하였다. CMC를 기질로 60$^{\circ}C$에서 효소활성이 가장 높았으며, 최적 pH는 pH 6.0이었다. 그리고 CoCl$_2$ 또는 MnSO$_4$ 첨가시 활성이 2배 이상 증가하였지만, FeCl$_3$ 또는 HgCl$_2$ 첨가 시는 활성이 20% 이하로 떨어졌고, SDS와 sodium azide 등 여러 화학 저해제들을 첨가하여도 87% 이상의 활성을 유지하였다. 이 결과들은 B. licheniformis K11이 식물뿌리에 근권 microflora형성의 중요한 요인으로 작용할 수 있고, 생물방제력을 발휘하는 식물병원성 진균의 세포벽 분해 cellulase 기능 연구를 가능케 하여 식물병의 생물학적 방제 연구에 기초가 될 것이라 생각된다.

• 한국환경농학회지
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• 제36권3호
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• pp.154-160
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• 2017

본 연구는 하천수 중 bisphenol계 화합물 종 6 (BPA, BPB, BPC, BPE, BPF, BPS)을 동시분석하기 위하여 GC-MS를 이용하였다. 또한 최적의 전처리 방법을 확립하고자 SPE 및 LLE법을 이용하여 표준시료로부터 검량선의 직선성, MDL, LOQ, 정확도 및 정밀도를 비교하였다. SPE 및 LLE 전처리 방법에 의한 MDL은 각각 $0.0005{\sim}0.0234{\mu}g/L$와 $0.0037{\sim}0.2034{\mu}g/L$, LOQ는 각각 $0.0015{\sim}0.0744{\mu}g/L$와 $0.0117{\sim}0.6477{\mu}g/L$, 검량선의 결정계수($r^2$)는 모두 0.9969이상 정확도는 각각 93.2~108%와 97.4~120%, 정밀도는 각각 1.7~4.6%와 0.7~6.5%범위로 만족한 정도관리 결과를 얻었다. 하지만 SPE법에 의한 MDL 및 LOQ 값은 LLE법보다 약 4~45배 정도 높은 감도를 보였고, 특히 BPA의 경우는 다른 화합물들보다 45배 정도 높았다. 따라서, 본 연구에서는 SPE법을 적용하여 하천수 시료를 분석하였고, 조사지점은 본류 7개, 지류 6개, 하수종말처리장 2개 지점을 선정하였다. Bisphenol계 화합물 중에서 BPB, BPC, BPE, BPF 및 BPS는 모두 불검출 되었으나, BPA 농도는 $0.0095{\sim}0.2583{\mu}g/L$ 범위로 본류 $0.0166{\sim}0.0810{\mu}g/L$, 지류 $0.0095{\sim}0.2583{\mu}g/L$, 하수종말처리장$0.0352{\sim}0.1217{\mu}g/L$으로 미량 수준이었다.