• Title/Summary/Keyword: Aquatic environments

Search Result 262, Processing Time 0.028 seconds

Report of 22 unrecorded bacterial species in Korea belonging to phylum Bacteroidetes, discovered during surveys in 2018

  • Kim, Min Ji;Kim, Yeong Seok;Cha, Chang-Jun;Im, Wan-Taek;Jeon, Che Ok;Joh, Kiseong;Seong, Chi Nam;Yi, Hana;Kim, Seung Bum
    • Journal of Species Research
    • /
    • v.9 no.1
    • /
    • pp.26-34
    • /
    • 2020
  • The phylum Bacteroidetes covers phenotypically diverse groups of Gram negative rods that do not form endospores, and currently includes 6 classes, 6 orders, 33 families and 380 genera. Members of Bacteroidetes can be aerobic and anaerobic heterotrophs, hydrogen utilizing chemolithotrophs, or methylotrophs. They can be isolated from diverse habitats including terrestrial and aquatic environments, environments with extreme physicochemical conditions, and animal and plant hosts. During a series of extensive surveys of prokaryotic species diversity in Korea, bacterial strains belonging to Bacteroidetes were isolated from various sources of aquatic and terrestrial environments. A total of 22 isolates were obtained, which represent 22 unrecorded species in Korea belonging to 14 genera of 6 families. Sixteen species among them were assigned to Flavobacteriaceae, two species were to Sphingobacteriaceae, and single species was to each of the families Bacteroidaceae, Balneolaceae, Chitinophagaceae and Cytophagaceae. At genus level, Chryseobacterium (5 species) and Flavobacterium (5 species) were the most abundant genera, and single species were obtained for the genera Bacteroides, Baloneola, Terrimonas, Dyadobacter, Aquimarina, Arenibacter, Gillisia, Gilvibacter, Salinimicrobium, Winogradskyella, Pedobacter and Sphingobacterium. The detailed descriptions of each unrecorded species are provided.

Novel Qnr Families as Conserved and Intrinsic Quinolone Resistance Determinants in Aeromonas spp.

  • Sang-Gyu Kim;Bo-Eun Kim;Jung Hun Lee;Dae-Wi Kim
    • Journal of Microbiology and Biotechnology
    • /
    • v.34 no.6
    • /
    • pp.1276-1286
    • /
    • 2024
  • The environment has been identified as an origin, reservoir, and transmission route of antibiotic resistance genes (ARGs). Among diverse environments, freshwater environments have been recognized as pivotal in the transmission of ARGs between opportunistic pathogens and autochthonous bacteria such as Aeromonas spp. In this study, five environmental strains of Aeromonas spp. exhibiting multidrug resistance (MDR) were selected for whole-genome sequencing to ascertain their taxonomic assignment at the species-level and to delineate their ARG repertoires. Analyses of their genomes revealed the presence of one protein almost identical to AhQnr (A. hydrophila Qnr protein) and four novel proteins similar to AhQnr. To scrutinize the classification and taxonomic distribution of these proteins, all Aeromonas genomes deposited in the NCBI RefSeq genome database (1,222 genomes) were investigated. This revealed that these Aeromonas Qnr (AQnr) proteins are conserved intrinsic resistance determinants of the genus, exhibiting species-specific diversity. Additionally, structure prediction and analysis of contribution to quinolone resistance by AQnr proteins of the isolates, confirmed their functionality as quinolone resistance determinants. Given the origin of mobile qnr genes from aquatic bacteria and the crucial role of Aeromonas spp. in ARG dissemination in aquatic environments, a thorough understanding and strict surveillance of AQnr families prior to the clinical emergence are imperative. In this study, using comparative genome analyses and functional characterization of AQnr proteins in the genus Aeromonas, novel Aeromonas ARGs requiring surveillance has suggested.

Limnological Characteristics of the River-type Paltang Reservoir, Korea: Hydrological and Environmental Factors (하천형 저수지 팔당호의 육수학적 특성:수문과 수환경 요인)

  • Shin, Jae-Ki;Kang, Chang-Keun;Kim, Ho-Sub;Hwang, Soon-Jin
    • Korean Journal of Ecology and Environment
    • /
    • v.36 no.3 s.104
    • /
    • pp.242-256
    • /
    • 2003
  • This study aimed to determine the relationship between rainfall-discharge patterns and maior aquatic environmental factors in a river-type reservoir. Specifically, daily monitoring was conducted in Paltang Reservoir from January 1999 to December 2001. Observation of the daily changes of the environment factors showed that natural meteorological factors and hydrological factors causing the change of water discharge had a major effect on the aquatic environment. Rainfall was the main source of hydrological changes, with its frequency a possible direct variable governing the range of discharge changes. Rainfall was weak in November${\sim}$May and heavy in June${\sim}$October (heavist in summer). The range of water discharge was greatest during summer (July to September) and lowest during winter (January to February). A principal component analysis (PCA) showed that aquatic environmental factors could be classified into three different types in the pattern of annual variation. First, type I included water temperature, turbidity, water color and organic matter (COD), which increased with increasing water discharge. Second, type ll consisted of DO and pH, which decreased with increasing water discharge. Third, type III included conductivity, alkalinity and chloride ion, which showed middle values with increasing water discharge. Monthly variation of aquatic environments explained by the first two dimensions of the PCA suggests that aquatic environments of Paltang Reservoir may have annual cycle typical of river-type reservoirs depending on hydrological factor such as water discharge.

Construction of Aquatic Environmental Database Near Wolsong Nuclear Power Plant (월성 원전 주변 수생 환경 자료 구축)

  • Suh, Kyung-Suk;Min, Byung-Il;Yang, Byung-Mo;Kim, Jiyoon;Park, Kihyun;Kim, Sora
    • Journal of Nuclear Fuel Cycle and Waste Technology(JNFCWT)
    • /
    • v.17 no.2
    • /
    • pp.235-243
    • /
    • 2019
  • Radioactive materials are released into the air and deposited on the surface soil after a nuclear accident. Radionuclides deposited in soil are transported by precipitation to nearby environments and contaminate the surface water system. Basic data on surface watershed and soil erosion models have been collected and analyzed to evaluate the behavior of radionuclides deposited on surface soil after a nuclear accident. Data acquisition and analysis in aquatic environment were performed to investigate the physical characteristics and variation of biota in rivers and lakes of the Nakdong river area near the Wolsong nuclear power plant. For these purposes, a digital map, and hydrological, water quality and biota data were gathered and a systematic database (DB) was constructed in connection with them. Constructed aquatic DB will be supplied and used in surface watershed and soil erosion models for investigation of long-term movement of radionuclides in adsorptive form in surface soil. Finally, basic data and established models will be utilized for general radiological impact assessment in aquatic environment.

Microplastic pollution in two industrial locations of the Karnaphuli River, Bangladesh: insights on abundance, types, and characteristics

  • Shahida Arfine Shimul;Zannatul Bakeya;Jannatun Naeem Ananna;Antar Sarker;Saifuddin Rana;Sk. Ahmad Al Nahid
    • Fisheries and Aquatic Sciences
    • /
    • v.26 no.12
    • /
    • pp.715-725
    • /
    • 2023
  • Microplastic (MP) pollution in aquatic environments is a growing concern worldwide. This study investigated the abundance, types, and attributes of MPs in the surface water at two industrial sites (Avoimitro Ghat and Kalurghat) along the Karnaphuli River in Chattogram, Bangladesh. Sampling was conducted over eight months across three transects encompassing a total area of 500 m at each site. A manta net of 200 ㎛ mesh size was used to sample MPs. The obtained samples were subsequently filtered, enumerated, and characterized using a stereo microscope and imaging software. The mean abundance of MP particles (per km2 ) was found higher in Avoimitro Ghat (94,861 ± 57,126) than in Kalurghat (31,343 ± 23,183). A significant statistical difference (p < 0.05) was observed in the mean abundance of MP particles between the wet and dry seasons. The fragment group of MP exhibited the most abundant category, whereas the pellet category displayed the lowest. MPs with an elongated shape prevailed at both locations throughout all seasons. At Avoimitro Ghat, blue-colored MPs demonstrated the highest mean count, while in Kalurghat, the highest mean count belonged to brown-colored MPs. The size distribution of MPs differed between the two sites, with 1-2 mm MPs being plentiful in both seasons and Avoimitro Ghat, whereas MPs ranging from 500 ㎛ to less than 1 mm were abundant in Kalurghat. Ten (10) polymer types were found from Fourier-transform infrared spectroscopy (FTIR) analysis with high levels of polypropylene atactic in both Avoimitro Ghat (32%) and Kalurghat (17%). The findings provide important insights into MP pollution in the Karnaphuli River, which may aid in developing effective strategies to mitigate the impacts of MP pollution on the aquatic ecosystem and human health.

A study on the aquatic eco-risk assessment of antibiotics treated by radiation (방사선으로 처리된 항생물질의 수서 생태위해성 평가)

  • Kang, Seon-Hong;Chang, Jae-Goo;Ka, Soon-Kyu;Kim, Hyun-Young;Kim, Sang-Don;Lee, Myun-Joo
    • Journal of Korean Society of Water and Wastewater
    • /
    • v.26 no.3
    • /
    • pp.373-381
    • /
    • 2012
  • Antibiotics have been issued recently in water environments because of potential impacts on ecosystem and public health. This study was aimed to investigating the degradation of antibiotics such as tetracycline, lincomycin, sulfamethazine and cephradine using gamma ray irradiation. And the toxicity before and after irradiation on antibiotics was tested in order to examine the aquatic eco-risk assessment by aquatic organisms. In addition, comparing tests on toxicity for gamma ray and UV irradiated antibiotics was conducted. Four different antibiotics were prepared by concentration of 30 mg/L with demi-water respectively. The absorption dose of gamma ray was ranged from 0.2 to 2 kGy. The concentration of four antibiotics was gradually decreased corresponding to the increase of the absorption dose. A method for toxicity assessment using Pseudokirchneriella subcapitata was evaluated to the most acceptable compared with methods by Daphnia magna and Microtox$^{(R)}$ in terms of sensibility. It showed that the reduction of toxicity on antibiotics treated by gamma ray was superior comparing to the test results obtained from UV treatment. By-products from antibiotics treated by gamma ray were easily decomposed by microorganism and their toxicity was also evaluated to low.

Vertebral abnormality in Hatchery-reared Black Sea Bream (Acanthoparus schlegelii) fingerlings (인공종묘 생산 감성돔 (Acanthoparus schlegelii) 치어의 척추 변형에 관하여)

  • Park, Sung-Woo;No, Yun-San;Yu, Jin-Ha;Kim, Jin-Do
    • Journal of fish pathology
    • /
    • v.21 no.2
    • /
    • pp.139-148
    • /
    • 2008
  • Vertebral deformity in hatchery-reared black sea bream (Acanthoparus schlegelii) fingerlings occurred. Deformed fish had a good appetite but no clinical signs were found except the vertebral abnormality and darkness around the dorsal skin of the deformed vertebra. As more than 90% of the hatchery-reared fish exhibited vertebral abnormality, the fingerlings could not be used for commercial seeds any more. No morphological change in the swim bladder was observed. Histopathological changes on the deformed vertebra, gill, liver, and spleen were observed to clarify the cause of the deformity. The vertebra were irregularly deformed upward with the shape of "V" in an alphabetic character causing the spinal cord and dorsal aorta suppressed. The diameters of the muscle fibers around the deformed vertebra, especially, in the dorsal part, were much smaller and more irregular than those in normal fish, and the gabs between the fiber bundles were enlarged. No evidence of inflammatory responses in the lateral musculature were found. On the basis of normal inflation of the swim bladder, cultural environments for growth of the fingerlings, and histopathological alterations in the muscle, vertebra and gills, it is suggested that high speed of water current in the culturing aquaria between 23 to 30 days after hatching was responsible for the development of vertebral abnormality.

Distribution of Pathogenic Vibrio spp. in Seawater of the Geum River Estuary Area, West Coast of Korea (금강 하구 해역의 해수에 병원성 비브리오균(Vibrio spp.)의 분포)

  • Park, Seon-A;Park, Kwon-Sam
    • Korean Journal of Fisheries and Aquatic Sciences
    • /
    • v.55 no.6
    • /
    • pp.844-849
    • /
    • 2022
  • The pathogenic Vibrio genus denotes halophilic bacteria that are distributed in aquatic environments, including both sea and freshwater. V. cholerae, V. vulnificus, and V. parahaemolyticus are the main species that can be potent human pathogens and the leading cause of septicemia, wound infections, and seafood borne gastroenteritis. The aim of this study was to investigate the presence of pathogenic Vibrios in seawater. We obtained a total of 80 seawater samples from the Geum River estuary area in the west coast of Korea from April to December 2021. Pathogenic Vibrios was determined using a combination of the most probable number-polymerase chain reaction (MPN-PCR) methods. The detection levels of V. cholerae, V. parahaemolyticus, and V. vulnificus in the seawater samples were 7.5%, 68.8%, and 30.0%, respectively. The quantitative results were as follows: 3.6-3.6 MPN/100 mL in V. cholerae, 3.6-3,400 MPN/100 mL in V. parahaemolyticus, and 3.6-4,300 MPN/100 mL in V. vulnificus. Overall, these results provide novel insight into the necessity for seawater sanitation in the Geum River estuary area, and could help reduce the risk of seafood-borne outbreaks caused by pathogenic Vibrios.

Development and Applications of an Optic Oxygen Sensor Datalogger for in situ Dissolved Oxygen Monitoring in Coastal Water (연안 용존산소 현장 모니터링용 산소광센서 데이터로거 개발 및 적용)

  • Jae Seong, Lee;Hyunmin Baek
    • Ocean and Polar Research
    • /
    • v.45 no.2
    • /
    • pp.33-42
    • /
    • 2023
  • Dissolved oxygen (DO) is a crucial parameter for assessing environmental conditions in aquatic ecosystems. However, commercial in situ dataloggers for oxygen optodes can be relatively expensive and limited in their specifications. In this paper, we present a novel design for a DO datalogger system based on the control boards family with RP2040 MCU chipset. Our design includes two types of dataloggers: a simple logging system and a programmable system for sampling rates via magnetic switches underwater for divers. We provide detailed descriptions of the system, including the MicroPython source code and drawings to aid in construction. We also discuss the various applications of our DO datalogger system in monitoring dissolved oxygen concentration in coastal waters and assessing the benthic metabolism of aquatic ecosystems. Our DO datalogger system provides an affordable and flexible option for researchers to accurately monitor DO concentrations in aquatic environments, and thereby improve our understanding of these complex ecosystems.

The Impact of Water Depth and Speed on Lower Muscles Activation During Exercise in Different Aquatic Environments

  • Gyu-sun, Moon
    • International Journal of Internet, Broadcasting and Communication
    • /
    • v.16 no.2
    • /
    • pp.169-178
    • /
    • 2024
  • This study aimed to investigate the effects of water depth and speed on the activation of lower muscles during squat exercises, utilizing electromyography(EMG). It involved ten male participants in there. Participants performed 30 squats over a minute at a speed of 60bpm and maximum speed squats until exhaustion within a minute. The Integrated electromyography(iEMG) readings for the rectus femoris showed statistically significant differences due to water depth and speed, with a significant interaction effect between depth and speed during squat exercises. The iEMG readings for the biceps femoris also showed statistically significant differences, with a significant interaction effect between depth and speed during squat exercises. The iEMG readings for the gastrocnemius showed statistically significant differences according to water depth and speed. However, the interaction effect of water depth and speed during squat exercises did not show a statistically significant difference. In contrast, the iEMG readings for the tibialis anterior demonstrated statistically significant differences, with a statistically significant interaction effect during squats. These findings suggest that water depth and speed positively influence the activation patterns of lower muscles. Therefore, appropriately tailored aquatic exercises based on water depth for individuals with musculoskeletal discomfort, including the elderly or those with physical impairments, can effectively reduce physical strain and enhance balance, as well as physical and perceptual aspects. It is concluded that such exercises could provide a safer and more effective method of exercise compared to ground-based alternatives.