• Title/Summary/Keyword: Acid Soil

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Molecular and Biochemical Characterization of a Novel Intracellular Low-Temperature-Active Xylanase

  • Zhou, Junpei;Dong, Yanyan;Tang, Xianghua;Li, Junjun;Xu, Bo;Wu, Qian;Gao, Yajie;Pan, Lu;Huang, Zunxi
    • Journal of Microbiology and Biotechnology
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    • v.22 no.4
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    • pp.501-509
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    • 2012
  • A 990 bp full-length gene (xynAHJ2) encoding a 329-residue polypeptide (XynAHJ2) with a calculated mass of 38.4 kDa was cloned from Bacillus sp. HJ2 harbored in a saline soil. XynAHJ2 showed no signal peptide, distinct amino acid stretches of glycoside hydrolase (GH) family 10 intracellular endoxylanases, and the highest amino acid sequence identity of 65.3% with the identified GH 10 intracellular mesophilic endoxylanase iM-KRICT PX1-Ps from Paenibacillus sp. HPL-001 (ACJ06666). The recombinant enzyme (rXynAHJ2) was expressed in Escherichia coli and displayed the typical characteristics of low-temperature-active enzyme (exhibiting optimum activity at $35^{\circ}C$, 62% at $20^{\circ}C$, and 38% at $10^{\circ}C$; thermolability at ${\geq}45^{\circ}C$). Compared with the reported GH 10 low-temperature-active endoxylanases, which are all extracellular, rXynAHJ2 showed low amino acid sequence identities (<45%), low homology (different phylogenetic cluster), and difference of structure (decreased amount of total accessible surface area and exposed nonpolar accessible surface area). Compared with the reported GH 10 intracellular endoxylanases, which are all mesophilic and thermophilic, rXynAHJ2 has decreased numbers of arginine residues and salt bridges, and showed resistance to $Ni^{2+}$, $Ca^{2+}$, or EDTA at 10 mM final concentration. The above mechanism of structural adaptation for low-temperature activity of intracellular endoxylanase rXynAHJ2 is different from that of GH 10 extracellular low-temperature-active endoxylanases. This is the first report of the molecular and biochemical characterizations of a novel intracellular low-temperature-active xylanase.

Growth and Quality Changes of Creeping Bentgrass by Application of Liquid Fertilizer Containing Humic Acid (부식산 함유 액상비료 시비에 따른 크리핑 벤트그래스의 생육과 품질 변화)

  • Kim, Young-Sun;Lee, Tae-Soon;Cho, Sung-Hyun;Lee, Geung-Joo
    • Weed & Turfgrass Science
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    • v.6 no.3
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    • pp.272-281
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    • 2017
  • This study was conducted to evaluate the effect of liquid fertilizer containing humic acid (LFHA) on changes of creeping bentgrass quality and growth. Treatments were designed as follows; control fertilizer (CF), HA-1 ($CF+1ml\;m^{-2}LFHA$ LFHA), HA-2 ($CF+2ml\;m^{-2}LFHA$ LFHA), and HA-3 ($CF+4ml\;m^{-2}LFHA$). As compared with CF, soil chemical properties and chlorophyll content of clipping of LFHA treatments were not significantly different. Visual quality in both of HA-2 and HA-3 treatments was higher than that of CF treatment from September to November, and clipping yield on October 27. Shoot density, root length, and the content of nitrogen, phosphorus or potassium were increased by application of LFHA. The clipping yield was positively correlated with phosphorus content, potassium content or shoot density. Similarly, LFHA level was proportionate to clipping yield of creeping bentgrass, and N, P, K contents in the leaf tissue. These results generally demonstrated that the application of LFHA improved the growth and quality of creeping bentgrass by increase of N content or P in leaf tissue.

Present Deterioration Situation and Study on the Cleaning of the Surface of the Octagonal nine storied pagoda of Woljeongsa Temple (월정사팔각구층석탑의 손상현황과 표면오염물 제거연구)

  • Hwang, Jeong Eun;Kim, Sa Dug;Jung, Hee Soo
    • 보존과학연구
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    • s.33
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    • pp.125-148
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    • 2012
  • The Octagonal nine storied pagoda of Woljeongsa Temple consists mainly of granite with the rockforming minerals quartz, plagioclase, microcline, and biotite. The surface of the stone stupa is light brown that has been discolored by the rust from the metal ornament and aids. The surface of the stylobate and roof stone is colonized by biological contaminants. Therefore, a comprehensive deterioration diagnosis was carried out in this study, and conservation treatment was conducted. It was proven that the $Fe^{2+}$ yield increases depending on the count of poultice used with oxalic acid, but the $Mg^{2+}$, $Al^{3+}$, and $Ca^{2+}$ yields were marginal following the preliminary test. Therefore, the use of poultice is an effective way of removing the rust, and only marginally influences the rock. The biological contaminants were removed through dry cleaning, and the soil located under the contaminants was removed through wet cleaning. Based on this, the dry and wet cleaning of all the biological contaminants, and the use of poultice with oxalic acid, were done to remove the rust. For the conservation treatment of the metal ornament, the rust was removed through physical cleaning, and anticorrosion treatment was performed on the iron ornament using Renaissance wax and copper ornament by BTA.

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Influence of Submersion by Heavy Rain on Growth, Yield and Qua1i1y of Peanut Plant Cultivated in Nakdong Riverside (낙동강유역 땅콩재배지 홍수에 의한 침수피해가 땅콩 생육, 수량 및 품질에 미치는 영향)

  • Kim, Chang-Bae;Lee, Suk-Hee;Yoon, Jae-Tak;Kim, Tak
    • Food Science and Preservation
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    • v.6 no.3
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    • pp.292-296
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    • 1999
  • This experiment was carried out to investigate the growth status, grain yield and quality of the peanut submerged by the flood in grain filling time. The growth status and grain yield of peanut plant after flooding became worse as the flooded day increases and there was remarkable difference in quality between the submerged peanut for just one day and the unsubmerged peanut. For the storage period, the acid value of lipid extracted from submerged peanuts was increased, and the content of linoleic acid of that decreased as the day of submergence became longer. The content of N, P2Of and MgO in peanut plant was increased but the content of K$_2$O was decreased as the submergence duration became longer and the content of soil components were remarkably decreased after submergence. Thus the flooding during the grain filling period caused serious reduction in grain yield and quality of peanut, and more serious reduction was occurred due to longer duration of submergence.

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Accumulation of Crude Lipids, Phenolic Compounds and Iron in Rusty Ginseng Root Epidermis (적변삼 외피에서 지질, 페놀성물질 및 철 성분의 축적에 관한 연구)

  • Lee, Tae-Su;Mok, Sung-Kyun;Cheon, Seong-Ki;Yoon, Jong-Hyuk;Baek, Nam-In;Choe, Jyung
    • Journal of Ginseng Research
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    • v.28 no.3
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    • pp.157-164
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    • 2004
  • The study was conducted to investigate the tissue and chemical characteristics of rusty root epidermal cells. In histological study, the rusty symptoms were frequently observed in the epidermis of ginseng root and to be yellow under microscopic observation. Disks of the epidermal cell tissue of the rusty root were usually 2 and 3 times greater in the number of cell layer and thickness of cell wall than the healthy root, respectively. The color degree of methanol extracts from the rusty root epidermis was 5.5 times higher than that of the healthy root. And the extracts of rust matter in the root epidermis were easily dissolved in polar solvents compared to nonpolar solvents. UV-absorption spectra of methanol extracts in various fractions of phenolics showed a maximum peak between 275∼280 nm. The crude lipids and phenolic compounds such as acid insoluble bound phenolics, acid insoluble esterified phenolics, acid insoluble condensed phenolics, insoluble bound phenolics and free phenolics were also more in the rusty root epidermis than in the healthy one. Fe content in the rusty root epidermis was 2.7 times higher than that of healthy one. It was presumed that the phenolic compounds(precursor of the rusty) in association with lipid and iron in the root epidermis might defence the root when ginseng root was depressed by the unfavorable conditions in soil and/or portions of a root system were subjected to anoxic conditions.

Gas Separations of Natural Zeolite by Chemical Treatments (화학처리에 의한 천연 Zeolite의 Gas 분리)

  • Im, Goeng
    • The Journal of Natural Sciences
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    • v.5 no.1
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    • pp.67-75
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    • 1992
  • In the our country, especially in Yeongil and Wolsung area, abundant authigenic zeolites are found from the tuffaceous sediments and volcanic rocks of Miocene age showing wide variation in their mineralogy and abundance from horizon to horizon. The principal zeolite species identified are clinopti-lolite. mordenite. heulandite. ferrierite, and erionite. etc. Zeolite minerals are widely used in many countries in the following applications; (a) in air separation adsorption processes; (b)as desiccants; (c)in inorganic building materials; (d)in papermaking; (e)in fertilizers; (f)as soilconditioners-this application is based upon the ability of the zeolite to ion exchange with soil nutrients; (g)in the treatment of radioactive wastes; and (h)as adsorbents for toxic gases, etc. In the present paper, using natural zeolite mordenite treated with IN hydrochloric acid or IN sodium chloride solution as column packings, separation characteristics of argon, nitrogen, carbon monoxide, and methane gases have been studied by gas chromatography. By the use of mordenite treated with hydrochloric acid solution, the tailing peak of methane showed from untreated mordenite was satisfactorily reduced, although it was difficult to separate it from carbon monoxide with a column activated at $300^{\circ}C$. Using a column activated at $350^{\circ}C$, methane could be separated from carbon monoxide easily but only carbon monoxide eluted as a bad defined peak. Mordenite treated with sodium chloride solution was generally similar to chromatograms obtained by using the untreated mordenite. Both the above chemical treatments of mordenite had little effect on the separations of argon and nitrogen. The separations and the HETP values obtained from natural zeolite mordenite treated with continuously hydrochloric acid and sodium chloride solutions were almost identical with those obtained with synthetic molecular sieve 5A zeolite. On the other hand, the efficiency of column was good in the range 20~3Oml/min of the carrier helium gas rate.

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The Study on the Early Diagnosis of Injuries for Needles of Conifer by Acid Rain and Air Pollutants (산성비 및 대기오염물질이 침엽수 잎에 미치는 피해의 조기판단에 관한 연구)

  • 이경재;송근준;김선희;이윤원
    • Korean Journal of Environment and Ecology
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    • v.7 no.2
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    • pp.252-269
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    • 1994
  • This study was conducted to the early diagnosis of injuries on needles of conifer by acid rain and air pollutants in metropolitan area, Korea. It was executed to calculate of injured index, contact angle measurement, nutrient content analysis in needles, analysis of soil chemical properties from June 1990 to June 1991. The sensitive species (Picea abies, Abies holophylla) for acid rain and air pollutants were used as the study materials. And the results from this study were as follows : Degree of Injured index was divided into three groups in June 1990. The first group (not injured sites) was Kwangnung and Yangpyung. The Second group (slight injured sites) was Inchon, Boramae Park, Kwachun, Seoul Women's Univ., Anyng, and Yangsuri. The third group (serious injured sites) was Namsan, Seoul City Univ., Children's Park, and Kumgok Royal Tomb. But, Inchon, Kwachon area were changed from slight injured areas to serious injured areas in December 1990. As time goes on, the degree of injured gets worse. In contact angle analysis, value of December 1990 was lower than that of June 1990, especially, that of two-year-needle were lower than of one-year-needle. The correlation between injured Index and contact angle was significantly negative. In the result of needle nutrients analysis of Picea abies, Abies hozophylla, Ca, Mg, K contents was higher in December 1990 than that in June 1991 and that of one-year-needle were prominantly higher than that of two-year-needle. In case of wax quantity analysis in injured area, the older the leaf age is, the smaller the contented wax quantity is. In injured area, the higher a leaf age is, the much that of index is. As a result, the method of analysis referred in the former, is applied by a complementary cooperation. That of method is done sustainably in the future, the correct results will be expected.

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An Evaluation of Plant Growth Promoting Activities and Salt Tolerance of Rhizobacteria Isolated from Plants Native to Coastal Sand Dunes (해안사구의 토착식물로부터 분리된 근권세균의 내염능과 식물성장촉진능 평가)

  • Hong, Sun Hwa;Lee, Mi Hyang;Kim, Ji Seul;Lee, Eun Young
    • Microbiology and Biotechnology Letters
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    • v.40 no.3
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    • pp.261-267
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    • 2012
  • Coastal sand dunes are important for ecosystems due to the variety of rare species that can be found in this kind of habitat, and the beautiful landscapes they create. For environmental remediation, a potential strategy is phytoremediation using the symbiotic relationship of plants and microbes in the rhizosphere, which has proven ecologically sound, safe, and cost effective. Ninety-five colonies were isolated from the rhizosphere soil (RS) or rhizoplane (RP) of Rorippa islandica, Rumex crispus, Artemisia princeps var. orientalis, Lilium sp Stellaria media, and Gramineae. These colonies were then tested for plant growth promoting activities (PGPAs) such as 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity, and siderphores synthesis ability. In addition, salt tolerance was evaluated at 4% and 8% salt concentrations. It was observed that amongst the test subjects about 50% of the strains had a high resistance to salinity. Many of them could produce indole-3-acetic acid (IAA) IAA (in RS 13.9% and in RP 7.6%), exhibited ACC deaminase activity (55.8% in RS and 36.6% in RP), and could synthesize siderphores (62.7% in RS and 50% in RP). Correlation coefficient analyses were carried out for the three kinds of plant growth promoting abilities (PGPA) and salt tolerance. A positive correlation was found between an ability to synthesize siderphores and ACC deaminase activity (r=0.605, p<0.037). Similarly, positive correlations were noted between salt tolerance and ACC deaminase activity (r=0.762, p<0.004, r=0.771), and salt tolerance and an ability to synthesize siderphores (r=0.771, p<0.003).

Characterization of Potential Plant Growth-promoting Rhizobacteria as Biological Agents with Antifungal Activity, Plant Growth-promoting Activity, and Mineral Solubilizing Activity (항진균 활성, 식물 생장촉진 활성, 미네랄 가용화능을 가진 생물학적 제제로서 잠재적 식물 생장촉진 근권세균의 특성조사)

  • Lee, Song Min;Kim, Ji-Youn;Kim, Hee Sook;Oh, Ka-Yoon;Lee, Kwang Hui;Lee, Sang-Hyeon;Jang, Jeong Su
    • Journal of Life Science
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    • v.31 no.7
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    • pp.641-653
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    • 2021
  • The purpose of this study was to confirm the antifungal activity, plant growth-promoting activity, and mineral solubilizing activity of 18 types of bacteria isolated purely from rhizosphere soil. The potential of isolates of the genus Bacillus and Pseudomonas as biocontrol agents was confirmed through the antifungal activity of these isolates. This activity has been determined to be due to various hydrolytic enzymes on the cell wall of plant pathogenic fungi and the production of siderophores in isolates. In addition, most of the isolates have been found to have aminocyclopropane-1-carboxylate deaminase production activity, indole-3-acetic acid production activity, and nitrogen fixation activity. These characteristics are believed to have a positive effect on root development, growth, and the productivity of crops via a reduction in the concentration of ethylene under conditions of environmental stress, to which plants are commonly exposed. In addition, on testing for the solubilizing activity of the isolates for phosphoric acid, silicon, calcium carbonate, and zinc, some isolates were found to have mineral solubilizing activities. Inoculation of these isolates during plant growth is expected to assist plant growth by converting nutrients necessary for growth into usable forms that can be absorbed by plants. The 18 isolated strains can be used as biocontrol agents due to their antifungal activity, plant growthpromoting activity, and mineral solubilizing activity.

Growth and Physiological Characteristics in a Halophyte Suaeda glauca under Different NaCl Concentrations (염생식물 나문재의 염농도에 따른 생장 및 생리적 특성)

  • Kim, Ji-Young;Seong, Phil-Mo;Lee, Deog-Bae;Chung, Nam-Jin
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.64 no.1
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    • pp.48-54
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    • 2019
  • This research was carried out to investigate the plant growth, inorganic ion and amino acid content characteristics in a halophyte, Suaeda glauca, under different NaCl concentrations for cultivating in the reclaimed land. S. glauca was hydroponically cultivated under 0, 50, 100, 200, 300 and 400 mM NaCl concentrations with Hogland's nutrient solution. To evaluate growth response under different NaCl concentrations, plant height and number of branches, dry weight, Fv/Fm value, and photosynthetic efficiency were investigated. To find out physiological characteristic, inorganic ion contents and amino acids in the plant were evaluated. The optimum concentration of NaCl for plant growth were 50 mM. The plant growth were gradually decreased in the concentration ranged from 100 to 400 mM. As increasing of NaCl concentration, Na ion was increased, but K, Ca, Mg ions were decreased in the plant. The amino acid contents were varied due to NaCl concentrations, but most of amino acids content in total plant was the lowest at 50 mM. Conversely, proline was exceptionally high at 50 mM of NaCl concentration. The Fv/Fm value was the highest at 50 mM of NaCl concentration. From these results, the optimum salt concentration for the growth of S. glauca was 50 mM, but the plant seems to adapt in a variety of salt environments in view of the change of ions and amino acids depending on salt concentration and the maintenance of photosynthetic efficiency even under high salt condition.