• Journal of Microbiology and Biotechnology
• /
• 제16권6호
• /
• pp.946-951
• /
• 2006

To study the effect of iron on Saccharomyces cerevisiae, whole-cell proteins of Saccharomyces cerevisiae were extracted and subjected to two-dimensional polyacrylamide gel electrophoresis (2D-PAGE), and differentially expressed proteins were identified. The proteins separated were further identified by matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry and were compared with a protein database. Of more than 300 spots separated by molecular weight and isoelectric points, 27 differentially expressed spots were identified. Ten proteins were found to be differentially expressed at high iron concentration. Triosephosphate isomerase (TPI), YDR533C hypothetical protein, superoxide dismutase (SOD), 60 kDa heat-shock protein (HSP60), pyruvate dehydrogenase beta subunit 1 (PDB1), and old yellow enzyme 2 (OYE2) were upregulated, whereas thiol-specific antioxidant (TSA), regulatory particle non-ATPase subunit 8 (RPN8), thiol-specific peroxiredoxin 1 (AHP1), and fructose-1, 6-bisphosphate adolase (FBA) were downregulated by iron. Based on the result, we propose that SOD upregulated by iron would protect the yeast from oxidative stress by iron, and that TSA downregulated by iron would render cells hypersensitive to oxidative stress.

• BMB Reports
• /
• 제40권3호
• /
• pp.412-418
• /
• 2007

Phospholipid hydroperoxide glutathione peroxidase (PHGPx) is an unique antioxidant enzyme that directly reduces lipid hydroperoxides in biomembranes. In the present work, the entire encoding region for Oryza sativa PHGPx was expressed in Escherichia coli M15, and the purified fusion protein showed a single band with 21.0 kD and pI = 8.5 on SDS- and IFE-PAGE, respectively. Judging from CD and fluorescence spectroscopy, this protein is considered to have a well-ordered structure with 12.2% $\alpha$-helix, 30.7%$\beta$-sheet, 18.5% $\delta$-turn, and 38.5% random coil. The optimum pH and temperature of the enzyme activity were pH 9.3 and 27$^{\circ}C$. The enzyme exhibited the highest affinity and catalytical efficiency to phospholipid hydroperoxide employing GSH or Trx as electron donor. Moreover, the protein displayed higher GSH-dependent activity towards t-Butyl-OOH and $H_2O_2$. These results show that OsPHGPx is an enzyme with broad specificity for hydroperoxide substrates and yielded significant insight into the physicochemical properties and the dynamics of OsPHGPx.

• 한국해양바이오학회지
• /
• 제2권1호
• /
• pp.68-72
• /
• 2007

넙치의 혈청 단백질체를 연구하기 위해 본 연구에서는 이차원전기영동 분석 시의 기본조건을 확립하였다. 넙치의 혈청단백질을 이차원전기영동 법으로 분석하기 위해서는 TCA 침전을 이용하여 혈청 내에 고농도로 존재하는 이온물질을 제거하는 전처리과 정이 반드시 요구되었다. 또한 분석 단백질의 농도는 $30{\mu}g$이 적당하였다. 넙치 10개체의 혈청단백질을 이용하여 총 51회의 이차원전기영동을 수행한 결과 1,8207개의 단백질로 이루어진 넙치 혈청단백질 표준 지도를 작성할 수 있었다.

• 대한의용생체공학회:학술대회논문집
• /
• 대한의용생체공학회 1998년도 추계학술대회
• /
• pp.104-105
• /
• 1998

To minimize the Y2K (year 2000) date aware problem of medical devices, we are developing a database that keeps the data such as equipment type, specification, serial number, model number, acquisition date, vendor, manufacturer of the device as well as the names of departments that installed and that is currently responsible for the management of the medical device. The database also keeps the information as to whether the device awares the date, whether it is affected by the Y2K problem or not, how to solve the problem, reference home page address, and so on. The data was collected via internet search of the FDA web site and related of manufacturers homepages. To manage the Y2K problem effectively, the database should be updated regularly to include recent information.

• 한국응용곤충학회지
• /
• 제32권4호
• /
• pp.426-432
• /
• 1993

경기도 일원의 양잠 농가의 먼지에서 채취한 45개의 샘플중에서 내독소 단백질 결정체를 생산하는 13개의 Bacillus thuringiensis를 분리하였다. 이 중 2개 균주는 파리목에 독성을 나타냈으며, 특히 독성검정에서 NT0423균주의 $LC_{50}$수치는 나비목의 배추좀나방이 최소 1.30$\times$$10^{6}$ CFU/ml이며, 파리목인 빨간 집모기에는 2.88$\times$$10^{5}$ CFU/ml로 나타났다. 새로 분리된 NT0423균주가 생산하는 내독소 단백질 결정체는 주사 전자현미경사진에서 전형적인 이중 피라미드모양을 보였다. 그리고 이 내독소 단백질 결정체의 SDS-PAGE 분석에서는 주요한 130kDa의 polypeptide을 나타내었다. 또한 NT0423균주의 총 플라스미드 DNA분석에서는 9개의 플라스미드를 갖고 있어 기존의 유사한 독성을 나타내는 균주들과 다른 패턴을 보였다.

• 보존과학연구
• /
• 통권19호
• /
• pp.3-22
• /
• 1998

The effect of pH on degradation of paper by some fungi, which able to degrade cellulose, was investigated. Trichoderma koningii, Aspergillus nigerand Penicillium nigulosum were cultured at $28^{\circ}C$ for 16 days in the selective medium (PH3, PH4, PH5, PH6, PH7, PH8, PH9, PH10, PHC) containing paper as substrate. Each paper was pretreated with each pH buffer (pH 3∼pH 10, D.W.)prior to addition to the selective medium. Enzyme activities in the each culture medium were measured spectroph to metrically using C.M.C., Avicel, PNPG as the substrates for endoglucanase, exoglucanase and $\beta$-glucosidase, respectively. In all experimental fungi, the enzyme activities of PH3 and PH9 medium were usually much higher than those of other experimental groups. However in the PH6medium, enzyme activity was lower than other groups. To analyze the concentration and pattern of protein in the each culture medium, the medium was concentrated by lyophilization. The protein concentration of PH3 and PH9 medium were relatively high (T.koningii; 6.31mg, 6,19mg, A.niger; 1.62mg, 1.96mg, P.nigulosum;2.50mg, 2.73mg, respectively), but that of PH6 was relatively low. The protein pattern of each medium was analyzed by using SDS-PAGE and VDS Image Master Analysis Program. The concentrations of bands in the each lane were usually high at lane2 (PH3) and lane8 (PH9) and low at lane5 (PH6). Therefore, the incresed cellulolytic activity of fungus against acidified paper could be result of structural change and deterioration of paper caused by being acidified.

• Clinical and Experimental Reproductive Medicine
• /
• 제22권2호
• /
• pp.191-201
• /
• 1995

Transcriptional activation of the embryonic genome initiates at 2-cell stage in mouse embryo and is characterized by the synthesis of TRC which is restricted to 2-cell stage. To investigate the roles of various protein kinases on the embryonic gene activation, the effects of protein kinase inhibitors on in vitro development and protein synthetic profiles of the early mouse embryos were examinded. None of ${\alpna}-amanitin$ which is a mRNA synthetic inhibitor, H8 which is a PKA inhibitor, and H7 which is a PKC inhibitor, affected on first cleavage of mouse 1-cell embryos in vitro. However, all of these drugs inhibited the second cleavage. When the drugs were removed following treatment for 6 hours, H8 or H7 treatment showed little inhibition on subsequent development of 1-cell embryos to 2-cell stage or further. In contrast, ${\alpna}-amanitin$ irreversibly inhibited the development of 1-cell embryos to 2-cell stage following removal of the drug. Genistein, a TPK inhibitor, inhibited both the first cleavage of 1-cell embryos and the second cleavage of 2-cell embryos, suggesting that TPK activity may be important during the early cleavages. All of the above four drugs inhibited TRC synthesis as shown by the fluorographic analysis of $[^{35}S]-Met$ labeled protein profiles. When late 1-cell embryos were treated with H7 and analyzed synthetic patterns of $[^{35}S]-Met$ labeled protein, the quantitative differences of protein synthesis on SDS-PAGE appeared on 77 kD and 33 kD region at $32{\sim}38$ hours post hCG. From these studies, transcriptional activation of embryonic genome is not essenting to the mouse 1-cell embryos to develop to 2-cell stage. Hawever, TPK activity is reguisite for both the first cleavage and second cleavage. Similarly, both PKC and PKA activities are required for the second cleavage of mouse embryos, but not for the first cleavage.

• Parasites, Hosts and Diseases
• /
• 제30권2호
• /
• pp.133-140
• /
• 1992

T. sergenti merozoite 수용성 항원을 T. sergenti 감염적혈구로부터 분리하고자 저삼투압액으로 용혈, 조직 분쇄기로 분쇄한 후에 고속 원심분리하여 수용성 항원을 얻었으며, SDS-PAGE와 Western blot의 방법으로 29, 34, 35 그리고 105 kD가 함유된 항원을 본 예방접종실험의 항원성 polypeptide로 정하였다. 본 수용성 항원(0.5 mg/ml)을 준비, Freund's adjunant를 이용하여 한우(5개월령)에 경피 접종하였으며, 다시 4주 후에 추가접종하였다. 추가접종 9주 후에 예방 접종군과 대조군에 동종의 냉동충주(5.6$\times$106RBC/dose, 40% 기생률)을 접종시킨 후에 적혈구용적비, 총적혈구수, 기생률, western biot에 의한 특이항체 그리고 간접형광항체(IFA) 등을 관찰하였던 바, 예방접종 후 18주(충 접종 6주 후)에 있어서 예방접종군의 IFA는 10,240이었으나, 대조군은 1,280이었다. 예방접종군에 있어서의 충접종 전후에 있어서의 총적혈구소와 적혈구웅적비는 유의적 차이 (p<0.05)를 나타내지 않았지만, 대조군에 있어서는 적혈구용적비와 총적혈구수에서 있어서 빈혈 소견을 관찰하였다 (p<0.05). 예방접종군의 충전종 후에 있어서의 western blot 반응에서는 29, 34, 35 그리고 105 kD polypeptide의 물질이 면역반응을 잘 나타내고 있어, 이들 polypeptide는 앞으로 vaccine 제조에 활용 가능성이 충분함을 예견할 수 있었다.

• Journal of Microbiology and Biotechnology
• /
• 제14권3호
• /
• pp.584-592
• /
• 2004

A thermostable $\beta$-glycosidase gene, tfi $\beta$-gly, was cloned from the genomic library of Thermus filiformis Wai33 A1. ifi $\beta$-gly consists of 1,296 bp nucleotide sequence and encodes a polypeptide of 431 amino acids. It shares a strong amino acid sequence similarity with the $\beta$-glycosidases from other Thermus spp. belonging to the glycosyl hydrolase family 1. In the present study, the enzyme was overexpressed in Escherichia coli BL21 (DE3) using the pET21b(+) vector system. The recombinant enzyme was purified to homogeneity by heat treatment and a $Ni^{2+}$-affinity chromatography. Polyacrylamide gel electrophoresis (PAGE) showed that the recombinant Tfi $\beta$-glycosidase was a monomeric form with molecular mass of 49 kDa. The temperature and pH range for optimal activity of the purified enzyme were 80- $90^{\circ}C$ and 5.0-6.0, respectively. Ninety-three percent of the enzyme activity was remained at $70^{\circ}C$ after 12 h, and its half-life at $80^{\circ}C$ was 6 h, indicating that Tfi $\beta$-glycosidase is highly thermostable. Based on its K_m$, or $K_{cat}K_m$, ratio, Tfi $\beta$-glycosidase appeared to have higher affinity for $\beta$-D-glucoside than for $\beta$-D-galactoside, however, $K_{cat} for \beta$-D-galactoside was much higher than that for $\beta$-D-glucoside. The activity for lactose hydrolysis was proportionally increased at $70^{\circ}C$ and pH 7.0 without substrate inhibition until reaching 250 mM lactose concentration. The specific activity of Tfi TEX>$\beta$-glycosidase on 138 mM lactose at $70{^\circ}C$ and pH 7.0 was 134.9 U/mg. Consequently, this newly cloned enzyme appears to have a valuable advantage of conducting biotechnological processes at elevated temperature during milk pasteurization in the production of low-lactose milk.

• 정보처리학회논문지D
• /
• 제9D권2호
• /
• pp.203-214
• /
• 2002

본 연구에서는 공간 데이터베이스 시스템에서 변환기법을 이용한 공간 액세스 구조에 대한 물리적 데이터베이스의 설계기법을 제안한다. 지금까지 공간 액세스 구조에 대한 많은 연구가 수행되어 왔으나 공간의 물리적 데이터베이스 설계의 측면에서의 연구는 수행된 바가 없다. 본 논문에서는 먼저 원공간(original space)에 주어지는 모든 광간 질의가 변환기법에 의한 변환공간에서는 한 가지 형태의 범위 질의로 변환되는 특징이 있음을 보인다. 그리고 변환공간상에서 이 범위 질의가 위치하는 질의 영역의 모양과 데이터 페이지가 위치하는 페이지 영역의 모양 사이의 관련성을 이용하여 질의처리의 성능을 향상시킬 수 있는 공간 액세스 간조의 최적 구성 기법을 제안한다. 또한, 성능평가를 위하여 공간 액세스 구조의 하나인 MBR-MLGF를 이용하여 다양한 질의 패턴과 데이터 분포에 대하여 제안된 설계기법을 적용한 실험 결과를 제시한다. 실험 결과에 의하면, 제안된 기법은 주어진 질의 패턴에 따라 최적의 MBR-MLGF를 구성할 수 있으며, 이차원 원공간에 대하여 변환공간으로 일반화한 사차원 질의 영역의 구간비가 1 : 16 : 256 : 4096인 경우, 기존의 순환 분할 기법에 비해 질의처리의 성능이 다섯배 이상으로 향상된다. 이러한 질의처리 성능의 향상은 제안된 물리적 데이터베이스 설계기법이 매우 유용함을 나타내는 것이다.