• Title/Summary/Keyword: 2D region

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Radiomics-based Biomarker Validation Study for Region Classification in 2D Prostate Cross-sectional Images (2D 전립선 단면 영상에서 영역 분류를 위한 라디오믹스 기반 바이오마커 검증 연구)

  • Jun Young, Park;Young Jae, Kim;Jisup, Kim;Kwang Gi, Kim
    • Journal of Biomedical Engineering Research
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    • v.44 no.1
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    • pp.25-32
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    • 2023
  • Recognizing the size and location of prostate cancer is critical for prostate cancer diagnosis, treatment, and predicting prognosis. This paper proposes a model to classify the tumor region and normal tissue with cross-sectional visual images of prostatectomy tissue. We used specimen images of 44 prostate cancer patients who received prostatectomy at Gachon University Gil Hospital. A total of 289 prostate slice images consist of 200 slices including tumor region and 89 slices not including tumor region. Images were divided based on the presence or absence of tumor, and a total of 93 features from each slice image were extracted using Radiomics: 18 first order, 24 GLCM, 16 GLRLM, 16 GLSZM, 5 NGTDM, and 14 GLDM. We compared feature selection techniques such as LASSO, ANOVA, SFS, Ridge and RF, LR, SVM classifiers for the model's high performances. We evaluated the model's performance with AUC of the ROC curve. The results showed that the combination of feature selection techniques LASSO, Ridge, and classifier RF could be best with an AUC of 0.99±0.005.

NONPOTENTIAL PARAMETERS OF SOLAR ACTIVE REGION AR 5747

  • MOON Y.-J.;YUN H. S.;CHOE GWANGSON;PARK Y. D.;MICKEY D. L.
    • Journal of The Korean Astronomical Society
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    • v.33 no.1
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    • pp.47-55
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    • 2000
  • Nonpotential characteristics of magnetic fields in AR 5747 are examined using Mees Solar Observatory magnetograms taken on Oct. 20, 1989 to Oct. 22, 1989. The active region showed such violent flaring activities during the observational span that strong X-ray flares took place including a 2B/X3 flare. The magnetogram data were obtained by the Haleakala Stokes Polarimeter which provides simultaneous Stokes profiles of the Fe I doublet 6301.5 and 6302.5. A nonlinear least square method was adopted to derive the magnetic field vectors from the observed Stokes profiles and a multi-step ambiguity solution method was employed to resolve the $180^{\circ}$ ambiguity. From the ambiguity-resolved vector magnetograms, we have derived a set of physical quantities characterizing the field configuration, which are magnetic flux, vertical current density, magnetic shear angle, angular shear, magnetic free energy density, a measure of magnetic field discontinuity MAD and linear force-free coefficient. Our results show that (1) magnetic nonpotentiality is concentrated near the inversion line in the flaring sites, (2) all the physical parameters decreased with time, which may imply that the active region was in a relaxation stage of its evolution, (3) 2-D MAD has similar patterns with other nonpotential parameters, demonstrating that it can be utilized as an useful parameter of flare producing active region, and (4) the linear force-free coefficient could be a evolutionary indicator with a merit as a global nonpotential parameter.

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Splitting of reinforced concrete panels under concentrated loads

  • Foster, Stephen J.;Rogowsky, David M.
    • Structural Engineering and Mechanics
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    • v.5 no.6
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    • pp.803-815
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    • 1997
  • It is well understood that concentrated forces applied in the plane of a beam or panel (such as a wall or slab) lead to splitting forces developing within a disturbed region forming beyond the bearing zone. In a linearly elastic material the length of the disturbed region is approximately equal to the depth of the member. In concrete structures, however, the length of the disturbed region is a function of the orthotropic properties of the concrete-steel composite. In the detailing of steel reinforcement within the disturbed regions two limit states must be satisfied; strength and serviceability (in this case the serviceability requirement being acceptable crack widths). If the design requires large redistribution of stresses, the member may perform poorly at service and/or overload. In this paper the results of a plane stress finite element investigation of concentrated loads on reinforced concrete panels are presented. Two cases are examined (i) panels loaded concentrically, and (ii) panels loaded eccentrically. The numerical investigation suggests that the bursting force distribution is substantially different from that calculated using elastic design methods currently used in some codes of practice. The optimum solution for a uniformly reinforced bursting region was found to be with the reinforcement distributed from approximately 0.2 times the effective depth of the member ($0.2D_e$) to between $1.2D_e$ and $1.6D_e$. Strut and tie models based on the finite element analyses are proposed herein.

A Region Depth Estimation Algorithm using Motion Vector from Monocular Video Sequence (단안영상에서 움직임 벡터를 이용한 영역의 깊이추정)

  • 손정만;박영민;윤영우
    • Journal of the Institute of Convergence Signal Processing
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    • v.5 no.2
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    • pp.96-105
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    • 2004
  • The recovering 3D image from 2D requires the depth information for each picture element. The manual creation of those 3D models is time consuming and expensive. The goal in this paper is to estimate the relative depth information of every region from single view image with camera translation. The paper is based on the fact that the motion of every point within image which taken from camera translation depends on the depth. Motion vector using full-search motion estimation is compensated for camera rotation and zooming. We have developed a framework that estimates the average frame depth by analyzing motion vector and then calculates relative depth of region to average frame depth. Simulation results show that the depth of region belongs to a near or far object is consistent accord with relative depth that man recognizes.

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Heavy Metal Tolerance of Novel Papiliotrema Yeast Isolated from Vietnamese Mangosteen

  • Nguyen, Kim Cuc Thi;Nguyen, Phu Van;Truong, Hai Thi Hong
    • Mycobiology
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    • v.48 no.4
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    • pp.296-303
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    • 2020
  • Three yeast strains (Hue-1, Hue-8, and Hue-19) with strong heavy metal tolerance were isolated from mangosteen from Hue city, Vietnam. They exhibited identical phenotype and phylogeny. Sequence analysis of the D1/D2 region of the LSU rRNA gene and the internal transcribed spacer (ITS) region demonstrated that the closest relative of these strains is Papiliotrema sp. with 2.12% and 3.55-3.7% divergence in the D1/D2 domain, and ITS domain, respectively. Based on the physiological, biochemical, and molecular data, the three strains belong to a novel species of Papiliotrema genus, for which the name Papiliotrema huenov sp. nov. is proposed. These strains are highly tolerant of heavy metals compared to other yeasts, being able to grow in the presence of 2 mM Pb (II), 2 mM Cd (II), and up to 5 mM Ni (II), but no growth was observed in the presence of 1 mM As (III).

Microwave Sol-Gel Preparation of NaLa(MoO4)2:Eu3+/Yb3+ Particles and Their Upconversion Photoluminescence Properties

  • Lim, Chang Sung
    • Korean Journal of Materials Research
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    • v.24 no.11
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    • pp.599-603
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    • 2014
  • $NaLa_{1-x}(MoO_4)_2:Eu^{3+}/Yb^3$ phosphors with doping concentrations of $Eu^{3+}$ and $Yb^{3+}$ ($x= Eu^{3+}+Yb^{3+}$, $Eu^{3+}=0.05$, 0.1, 0.2 and $Yb^{3+}= 0.2$, 0.45) were successfully synthesized by the microwave-modified sol-gel method, and the upconversion and spectroscopic properties were investigated. Well-crystallized particles showed a fine and homogeneous morphology with particle sizes of $2-5{\mu}m$. Under excitation at 980 nm, $NaLa_{0.5}(MoO_4)_2:Eu_{0.05}Yb_{0.45}$ particles exhibited a strong 525-nm emission band and a weak 550-nm emission band in the green region, and a very weak 665-nm emission band in the red region. The strong 525-nm emission in the green region corresponds to the $^7F_1{\rightarrow}^5D_1$ transition and the weak 550-nm emission in the green region corresponds to the $^7F_0{\rightarrow}^5D_2$ transition, while the very weak emission 665-nm band in the red region corresponds to the $^5D_0{\rightarrow}^7F_3$ transition. The Raman spectra of the doped particles indicated the domination of strong peaks at higher frequencies of 762, 890, 1358 and $1430cm^{-1}$ and weak peaks at lower frequencies of 323, 388 and $450cm^{-1}$ induced by the disorder of the $[MoO4]^{2-}$ groups with the incorporation of the $Eu^{3+}$ and $Yb^{3+}$ elements into the crystal lattice or by a new phase formation.

Solder Region Detection and Height Calculation by the Characteristics and Phase Difference of the 3D Profiles in Moire Images (모아레 영상에서 3차원 형상정보의 특성과 위상차에 의한 솔더영역 검출 및 높이 계산)

  • Song, Jun Ho;Rhee, Eun Joo
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.15 no.8
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    • pp.5269-5279
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    • 2014
  • The cause of defects in the PCB SMT assembly is mostly solder paste deposits. Conventional inspection methods for solder paste deposits suffer from slow speed, low reliability and high cost. Therefore, this paper proposes a method for calculating the height and region of solder paste on PCB using the 3D profiles without measuring the 2D image. The solder paste region is detected by the phase difference in the measurement points and the average phase on the whole surface of PCB. The high reliable height of the solder paste region is computed by the average of the measurement points' phase with repeatability and reliability. The experimental results revealed improvements of 17% in inspection time and 29% repeatability in the height calculation of the solder paste region, resulting in a high speed and less expensive system.

Study on Correlation of Droplet Flow Rate and Film Boiling Heat Transfer in Spray Cooling (액적 유량과 분무냉각 막비등 열전달의 상관관계에 관한 연구)

  • Yun, Seung-Min;Kim, Yeung-Chan
    • Transactions of the Korean Society of Mechanical Engineers B
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    • v.31 no.4
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    • pp.335-340
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    • 2007
  • A new correlation between the Nusselt number based on modified heat transfer coefficient and Reynold number based on droplet-flow-rate was developed for the experimental data. The modified heat transfer coefficient was defined as ratio of wall heat flux to droplet subcooling. In the previous reports, the local heat flux of spray cooling in the film boiling region was experimentally investigated for the water spray region of $D_{max} = 0.0007{\sim}0.03m^3/(m^2s)$ . In the region near the stagnation point of spray flow, a new heat transfer correlation is recommended which shows good predictions for the water spray region of $D_x{\le}0.01m^3/(m^2s)$.

Origin-related study of genetic diversity and heteroplasmy of Mongolian sheep (Ovis aries) using mitochondrial DNA

  • Kim, Yi Seul;Tseveen, Khaliunaa;Batsukh, Badamsuren;Seong, Jiyeon;Kong, Hong Sik
    • Journal of Animal Reproduction and Biotechnology
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    • v.35 no.2
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    • pp.198-206
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    • 2020
  • Food and agricultural production sector, especially livestock production is vital for Mongolia's economic and social development. Domestic sheep play key roles for Mongolians, providing food (meat, milk) and raw materials (wool, sheepskin), but genetic diversity, origin of sheep populations in Mongolia have not been well studied. Studies of population genetic diversity is important research field in conservation and restoration of animal breeds and genetic resources. Therefore, this study aimed to investigate genetic characteristics and estimate origin through the analysis of mitochondrial DNA control region D-loop and Cytochrome b of Mongolian indigenous sheep (Mongolian native, Orkhon and Altanbulag) and one Europe sheep (Suffolk). As a result of there were found, 220 SNPs (Single nucleotide polymorphism) in the D-loop region, 28 SNPs in the Cytochrome B region, furthermore, 77 Haplotypes. The nucleotide diversity was only found in D-loop region (n = 0.0184). Phylogenetic analysis showed that 3 (A, B, and C) of 5 haplogroups of sheep have been identified in our research. Haplogroup C was only found in Mongolian indigenous sheep. Haplogroup D and E were not observed. As a result of haplogroups, haplogroup A was dominant (n = 46 of 94 sheeps), followed by haplogroup B (n = 36) and haplogroup C (n = 12). Sequence analysis showed that T deletion, insertion and heteroplasmy in D-loop region occurred at a high rate in Mongolian indigenous sheep population (T insertion = 47, T deletion = 83). The heteroplasmy, which has never been found in Mongolian sheep, has been newly discovered in this study. As a result, the Mongolian sheep varieties, which mainly derived from Asia, were in hybridization with European sheep varieties.

A MODIFIED CAHN-HILLIARD EQUATION FOR 3D VOLUME RECONSTRUCTION FROM TWO PLANAR CROSS SECTIONS

  • Lee, Seunggyu;Choi, Yongho;Lee, Doyoon;Jo, Hong-Kwon;Lee, Seunghyun;Myung, Sunghyun;Kim, Junseok
    • Journal of the Korean Society for Industrial and Applied Mathematics
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    • v.19 no.1
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    • pp.47-56
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    • 2015
  • In this paper, we present an implicit method for reconstructing a 3D solid model from two 2D cross section images. The proposed method is based on the Cahn-Hilliard model for the image inpainting. Image inpainting is the process of reconstructing lost parts of images based on information from neighboring areas. We treat the empty region between the two cross sections as inpainting region and use two cross sections as neighboring information. We initialize the empty region by the linear interpolation. We perform numerical experiments demonstrating that our proposed method can generate a smooth 3D solid model from two cross section data.