• 제목/요약/키워드: 2D Marker

검색결과 506건 처리시간 0.029초

Antioxidative Activity of the Extract from the Inner Shell of Chestnut

  • SON Kyung Hun;YANG He Eun;LEE Seung Chul;CHUNG Ji Hun;JO Byoung Kee;KIM Hyun Pyo;HEO Moon Young
    • Biomolecules & Therapeutics
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    • 제13권3호
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    • pp.150-155
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    • 2005
  • The ethanolic extract of chestnut (Castanea crenata S. et Z., Fagaceae) inner shell (CISE) and one of its components, ellagic acid (EA), were evaluated for their protective effects against 1, 1-diphenyl-2-picryl hydrazine (DPPH) free radical generation and hydrogen peroxide-induced oxidative DNA damage in a mammalian cell line. CISE and EA were shown to possess the free radical scavenging effect against DPPH radical generation, significantly. They were also found to strongly inhibit hydrogen peroxide-induced DNA damage from Chinese hamster lung (CHL) cell, assessed by single cell gel electrophoresis assay and 8-hydroxy -2'-deoxy guanosine (8-OH-2'dG) assay. Furthermore, topical application of CISE [$12.5\%$(w/w) cream] and ellagic acid [$1.0\%$(w/w) cream] for 14 days potently inhibited malondialdehyde (MDA) formation of mouse dorsal skin (a marker of lipid peroxidation) induced by ultraviolet B exposure. Therefore, CISE and its component, ellagic acid, may be the useful natural antioxidants by scavenging free radicals, inhibition of lipid peroxidation and protecting oxidative DNA damage when topically applied.

Effects of Supplemental Beta-mannanase on Digestible Energy and Metabolizable Energy Contents of Copra Expellers and Palm Kernel Expellers Fed to Pigs

  • Kwon, W.B.;Kim, B.G.
    • Asian-Australasian Journal of Animal Sciences
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    • 제28권7호
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    • pp.1014-1019
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    • 2015
  • The purpose of this study was to determine the effect of ${\beta}$-mannanase supplementation on digestible energy (DE) and metabolizable energy (ME) contents of copra expellers (CE) and palm kernel expellers (PKE) fed to pigs. Six barrows with an initial body weight of 38.0 kg (standard deviation = 1.5) were randomly allotted to a $6{\times}6$ Latin square design with 6 dietary treatments and 6 periods. Six experimental diets were prepared in a $3{\times}2$ factorial treatment arrangement with 3 diets of a corn-soybean meal-based diet, a CE 30% diet, and a PKE 30% diet and with 2 concentrations of supplemental ${\beta}$-mannanase at 0 or 2,400 U/kg. All diets had the same proportion of corn:soybean meal ratio at 2.88:1. The marker-to-marker procedure was used for fecal and urine collection with 4-d adaptation and 5-d collection periods. No interactive effects were observed between diet and ${\beta}$-mannanase on energy digestibility and DE and ME contents of experimental diets. However, diets containing CE or PKE had less (p<0.05) DE and ME contents compared with the corn-soybean meal-based diet. The DE and ME contents in CE and PKE were not affected by supplemental ${\beta}$-mannanase. Taken together, we failed to find the effect of ${\beta}$-mannanase supplementation on energy utilization in CE and PKE fed to pigs.

Construction of Deletion Map of 16q by LOH Analysis from HCC Patients and Physical Map on 16q 23.3 - 24.1 Region

  • Chung, Jiyeol;Choi, Nae Yun;Shim, Myoung Sup;Choi, Dong Wook;Kang, Hyen Sam;Kim, Chang Min;Kim, Ung Jin;Park, Sun Hwa;Kim, Hyeon;Lee, Byeong Jae
    • Genomics & Informatics
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    • 제1권2호
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    • pp.101-107
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    • 2003
  • Loss of heterozygosity (LOH) has been used to detect deleted regions of a specific chromosome in cancer cells. LOH on chromosome 16q has been reported to occur frequently in progressed hepatocellular carcinoma (HCC). Liver tissues from 37 Korean HCC patients were analyzed for LOH by using 25 polymorphic microsatellite markers distributed along 16q. Out of the 37 HCC patients studied, 21 patients (56.8%) showed LOH in various regions of 16q with at least one polymorphic marker. Puring the analysis of these 21 LOH cases, 6 patients showed interstitial LOHs in which the boundary of the LOH region was defined. With two rounds of LOH analysis, five commonly occurring interstitial LOH regions were identified; 16q21-22.1, 16q22.2 - 22.3, 16q22.3, 16q23.2 and 16q23.3 - 24.1. Among the five LOH regions the 16q23.3 - 24.1 region has been reported to be related with chromosome instability. A complete physical map, which covers the 3.2 Mb region of 16q23.3 - 24.1 (D16S402 and D16S486), was constructed to identify novel candidate tumor suppressor genes. We provide the minimally tiling path map consisting of 28 BAC clones. There was one gap between NT_10422.11 and NT_019609.9 of the human genome sequence contig (NCBI sequence build 33, April 29, 2003). This gap can be filled by sequencing the R-1425M20 clone which bridges these sequence contigs.

Direct Coombs Test Positivity in B-Chronic Lymphoid Leukemia: a Marker of Advanced Clinical Disease

  • Abbas, Syeda Alia;Zeeshan, Rozina;Sultan, Sadia;Irfan, Syed Mohammad
    • Asian Pacific Journal of Cancer Prevention
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    • 제16권14호
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    • pp.6007-6010
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    • 2015
  • Background: Chronic lymphoid leukemia (CLL) is a malignant hematopoietic disorder, the most common of all adult leukemias with a distinctive immunophenotype. It is well established that CLL patients can have autoimmune complications, amongst them autoimmune hemolytic anemia as the most frequent. This study was carried out to determine the frequency of direct Coombs Test positivity in CLL patients and its possible correlation with Rai staging, hematological parameters and biochemical markers. Materials and Methods: This descriptive cross sectional study was carried at Liaquat National Hospital from January 2011 to June 2013. Sixty untreated patients with B- chronic lymphoid leukemia were enrolled. Complete blood count, direct Coombs test, serum urea, creatinine, uric acid and LDH levels were determined. Data were compiled and analyzed using SPSS version 21. Results: Out of 60 patients, 42(70%) were males and 18(30%) were females. Mean age was $59{\pm}9.2years$. Male to female ratio was 2.1: 1. The frequency of direct antiglobulin test (DAT) positivity was found to be 23.3%. The monospecific IgG was positive in 11 patients (18.3%); C3d positivity was evident in 1 patient (1.6%) and 2 patients (3.3%) had dual IgG and C3d positivity. The mean hemoglobin was $10.8{\pm}2.4gm/dl$. Significantly low mean hemoglobin of $8.3{\pm}3.0gm/dl$ was seen in Coombs positive patients compared with negative patients having a mean hemoglobin level of $11.7{\pm}1.6gm/dl$ (P<0.001). DAT positivity also demonstrated a positive association with advanced Rai stage III disease (P<0.01). No associations were noted with age, gender and biochemical markers. Conclusions: Direct Coombs test positivity in CLL in our patients, unlike in Western studies, appears relatively high, indicating significant autoimmune hemolytic anemia and advanced Rai stage in our setting. DAT positivity can be considered as a surrogative marker for advanced clinical disease.

Influence of $1{\alpha}$, 25-dihydroxyvitamin $D_3$ [1, $25(OH)_2D_3$] on the expression of Sox 9 and the transient receptor potential vanilloid 5/6 ion channels in equine articular chondrocytes

  • Hdud, Ismail M.;Loughna, Paul T.
    • Journal of Animal Science and Technology
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    • 제56권8호
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    • pp.33.1-33.8
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    • 2014
  • Background: Sox 9 is a major marker of chondrocyte differentiation. When chondrocytes are cultured in vitro they progressively de-differentiate and this is associated with a decline in Sox 9 expression. The active form of vitamin D, 1, 25 $(OH)_2D_3$ has been shown to be protective of cartilage in both humans and animals. In this study equine articular chondrocytes were grown in culture and the effects of 1, 25 $(OH)_2D_3$ upon Sox 9 expression examined. The expression of the transient receptor potential vanilloid (TRPV) ion channels 5 and 6 in equine chondrocytes in vitro, we have previously shown, is inversely correlated with de-differentiation. The expression of these channels in response to 1, 25 $(OH)_2D_3$ administration was therefore also examined. Results: The active form of vitamin D (1, 25 $(OH)_2D_3$ when administered to cultured equine chondrocytes at two different concentrations significantly increased the expression of Sox 9 at both. In contrast 1, 25 $(OH)_2D_3$ had no significant effect upon the expression of either TRPV 5 or 6 at either the protein or the mRNA level. Conclusions: The increased expression of Sox 9, in equine articular chondrocytes in vitro, in response to the active form of vitamin D suggests that this compound could be utilized to inhibit the progressive de-differentiation that is normally observed in these cells. It is also supportive of previous studies indicating that $1{\alpha}$, 25-dihydroxyvitamin $D_3$ can have a protective effect upon cartilage in animals in vivo. The previously observed correlation between the degree of differentiation and the expression levels of TRPV 5/6 had suggested that these ion channels may have a direct involvement in, or be modulated by, the differentiation process in vitro. The data in the present study do not support this.

팬톰을 이용한 전산화 단층촬영방법에 따른 재현성에 대한 고찰 (A Study for Reappearance Acording to the Scan Type, the CT Scanning by a Moving Phantom)

  • 최재혁;정도형;최계숙;장요종;김재원;이희석
    • 대한방사선치료학회지
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    • 제19권2호
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    • pp.123-129
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    • 2007
  • 목 적: 전산화 단층촬영방법(Computed Tomography, CT)에 따라 고식적(Axial), 나선식(Helical), 연속(Cine) 주사방법으로 획득되어진 영상은 주사방법이 다르므로 각각의 재현되는 이미지 상에서 차이가 존재한다. 각각의 전산화 단층촬영 주사방법(scan type)이 움직임을 얼마나 정확히 묘사하는지 알아보고자 구동 팬톰을 이용하여 재현성에 대해 고찰해 보고자 한다. 대상 및 방법: 상 하 방향, 위 아래 방향 움직임을 재현하기 위해 자체 제작한 구동 팬톰과 호흡동조 구동 motor를 이용한다. 구동 motor 위에 표지자를 올려놓고 전산화 단층촬영 시 움직임을 구별하기 위해 표지자에 위치 표시를 위한 방사선 비투과성 물질(Localizer)을 부착한다. 자체 제작한 구동 팬톰을 이용하여 위 아래 움직임은 1.3 cm (16회/1분당)으로 고정 시키고, 호흡동조 구동 motor을 이용하여 상 하 움직임은 0.2 cm (8 rot/1분당)으로 고정 한다. 각각의 움직임을 고정 시키고 난 후, 전산화 단층 촬영 방법에 따라 고식적(Axial), 나선식(Helical), 연속(Cine) 주사방법으로 촬영한다. RPT 장비를 이용하여 움직임을 나타내는 표지자에 부착한 방사선 비투과성 물질과 볼륨 재현성이 정확한지 비교, 분석 한다. 결 과: 표지자의 전체 체적은 88.2 $cm^3$로 위 아래 방향 3 cm, 상 하 방향 0.3 cm 이동을 고려했을 때는 전체 체적이 184.3 $cm^3$이었다. 각각의 전산화 단층촬영방법에 따른 전체 체적은 고식적 주사방법에서는 135 $cm^3$, 나선식 주사방법에서는 164.9 $cm^3$, 연속 주사방법에서는 181.7 $cm^3$였다. 움직임에 대한 재현성을 나타내는 데 있어 연속 주사방법에서 가장 근접하게 표지자를 묘출하였다. 또한, 표지자에 부착한 방사선 비투과성 물질의 재현성에서도 연속 주사방법에서 가장 근접하게 나타내었다. 결 론: 전산화 단층촬영방법에 따른 고식적, 나선식, 연속 주사방법은 움직임에 영향을 많이 받는 장기를 촬영할 때, 움직임에 따른 정확한 장기 묘사 및 종양 조직의 움직임을 재현해야 한다. 본 실험에서 사용한 구동 팬톰을 이용한 표지자를 재현하는데 있어 전산화 단층촬영 시 연속 주사방법에서 촬영 할 때 가장 재현성이 높았다. 하지만, 임상 적용 시 환자의 호흡이나 움직임이 팬톰처럼 일정하지 않기 때문에 이를 위한 환자 교육 및 호흡을 일정하게 해줄 수 있는 장치의 사용 및 개발이 필요하며, 각각의 전산화 단층촬영방법에 대한 피폭선량에 대해서도 고려해야 할 것이라 사료 된다.

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Implications of Temperature and Humidity on Pupation Patterns in the Silkworm, Bombyx mori L.

  • Lakshminarayana, P.;Naik, S.Sankar;Reddy, N.Sivarami
    • International Journal of Industrial Entomology and Biomaterials
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    • 제5권1호
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    • pp.67-71
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    • 2002
  • The implications of temperature (25,30 and 35$^{\circ}C$) and relative humidity (60, 70 and 80%) on the pupation patterns were studied in the silkworm, Bombyx mori L. Larvae of two pure silkworm breeds, Pure Mysore (PM) and NB4D2 and their hybrid, PM ${\times}4 NB4D2 were reared under experimental conditions under natural day photoperiodic (LD 12: 12) condition. The three developmental marker events viz., larval ripening, pharate pupal formation and pupal formation occurred at or around the beginning of the photo-phase. The computed of mean vector (equation omitted), based on the circular statistics, also confirmed the above. However, the length of mean vector, r and the mean vector angular variance, s varied according to temperature and humidity conditions imposed; the variations being non-significant. Extreme temperature and humidity conditions, however, resulted in reduction in pupation rate (%) for PM and PM ${\times}4 NB4D2. On the other hand, in NB4D2 pupation percentage reduced below the economic level. The temperature and humidity together seems to exert synergic impact on the pupation rate at least in the silkworm Bombyx mori, L.

인간 골수유래-중간엽 줄기세포(hBM-MSCs)에서 PDE4 억제조절을 통한 신경세포 분화 효율 개선 (Improvement of Neuronal Differentiation by PDE4 Inhibition in Human Bone Marrow-mesenchymal Stem Cells)

  • 정다희;조이슬;조광원
    • 생명과학회지
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    • 제26권12호
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    • pp.1355-1359
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    • 2016
  • 인간 중간엽 줄기세포(hMSCs)는 신경세포(neuron-like cells)를 포함한 다양한 세포로 분화할 수 있는 능력을 지닌 성체 줄기세포(adult stem cells)이다. 본 연구에서는 인간의 골수유래-중간엽 줄기세포(bone marrow-mesenchymal stem cells; hBM-MSCs)를 이용한 신경분화에서 신경세포 표지자(neuronal marker)인 NF-M, Tuj-1 뿐만 아니라 성상세포 표지자(glial marker)인 GFAP의 발현 역시 의미 있게 증가함을 real-time PCR, Western blot, and immunocytochemical staining법을 통하여 관찰하였다. 이를 개선하기 위하여, 신경분화에 중요한 신호전달자(signal intermediator)인 PDE4를 억제한 후 신경분화를 유도하였다. PDE4 억제자인 rolipram 혹은 resveratrol를 각각 처리하여 신경분화한 줄기세포(Roli- or RSV-dMSCs)에서 NF-M, Tuj-1의 발현이 증가하였고 반면, GFAP의 발현은 감소함을 real-time PCR, Western blot, and immunocytochemical staining법을 통하여 관찰하였다. 본 연구를 통하여, PDE4를 조절하며 줄기세포의 신경분화를 개선할 수 있음을 보였다.

Genetic Variability of mtDNA D-loop Region in Korean Native Chickens

  • Hoque, Md. Rashedul;Jung, Kie-Chul;Park, Byung-Kwon;Choi, Kang-Duk;Lee, Jun-Heon
    • 한국가금학회지
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    • 제36권4호
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    • pp.323-328
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    • 2009
  • 닭의 품종 기원을 결정하거나 유전적 변이의 정도를 확인 하는데 미토콘드리아 DNA D-loop 염기서열을 이용하여 오고 있다. 본 연구는 한국재래계 갈색종과 흑색종, 로드아일랜드레드종, 코니쉬종의 4품종 41개체의 염기서열을 분석함으로 품종간의 유전적 연관관계를 확인하였다. 그 결과 총 10개의 haplotype를 확인할 수 있었으며, haplotype 1과 2는 가장 많은 수인 8개체씩이 포함되었다. 계통도 분석을 통해 한국재래계 흑색종과 갈색종은 haplotype 2를 모두 가지고 있는 것으로 확인되었으며, 이 haplotype은 적색야계와 유전적으로 가깝게 위치한 것을 알 수 있었다. 본 연구를 통해 D-loop 염기서열 변이가 품종 판별 마커로 이용 가능성이 있는지 확인하였다. 그 결과 여러 단일염기다형 마커의 조합으로 품종의 구분이 가능할 것으로 추정되며, 앞으로 더 많은 연구가 진행되어야 할 것으로 생각된다. 이 연구의 결과는 한국재래계의 보존 및 육종계획 수립과 더불어 품종판별 마커의 개발의 기초 자료를 제공할 것으로 생각된다.

Genetics of Fusarium Wilt Resistance in Pigeonpea (Cajanus cajan) and Efficacy of Associated SSR Markers

  • Singh, Deepu;Sinha, B.;Rai, V.P.;Singh, M.N.;Singh, D.K.;Kumar, R.;Singh, A.K.
    • The Plant Pathology Journal
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    • 제32권2호
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    • pp.95-101
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    • 2016
  • Inheritance of resistance to Fusarium wilt (FW) disease caused by Fusarium udum was investigated in pigeonpea using four different long duration FW resistant genotypes viz., BDN-2004-1, BDN-2001-9, BWR-133 and IPA-234. Based on the $F_2$ segregation pattern, FW resistance has been reported to be governed by one dominant gene in BDN-2004-1 and BDN-2001-9, two duplicate dominant genes in BWR-133 and two dominant complimentary genes in resistance source IPA-234. Further, the efficacy of six simple sequence repeat (SSR) markers namely, ASSR-1, ASSR-23, ASSR-148, ASSR-229, ASSR-363 and ASSR-366 reported to be associated with FW resistance were also tested and concluded that markers ASSR-1, ASSR-23, ASSR-148 will be used for screening of parental genotypes in pigeonpea FW resistance breeding programs. The information on genetics of FW resistance generated from this study would be used, to introgress FW resistance into susceptible but highly adopted cultivars through marker-assisted backcross breeding and in conventional breeding programs.