• 제목/요약/키워드: 1-8D gene

검색결과 505건 처리시간 0.029초

Effect of Ground Chopi (Zanthoxylum piperitum) on Physicochemical Traits and Microbial Community of Chicken Summer Sausage during Manufacture

  • Utama, Dicky Tri;Park, Jongbin;Kim, Dong Soo;Kim, Eun Bae;Lee, Sung Ki
    • 한국축산식품학회지
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    • 제38권5호
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    • pp.936-949
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    • 2018
  • Changes in microbial community and physicochemical traits of chicken summer sausage made from spent layer thigh added with different level (0%, 0.1%, 0.3%, and 0.5% w/w) of ground chopi (Zanthoxylum piperitum) during manufacture were analyzed. The microbial community was profiled and analyzed by sequencing 16S rRNA gene using Illumina MiSeq. Samples were taken from raw sausage batter, after 15 h of fermentation, 8 h of cooking including cooling down, and 7 d of drying. The final pH of the sausage was reduced by the addition of ground chopi. However, no clear effect on water activity was observed. Ground chopi inhibited the development of red curing color after fermentation as it exhibited antimicrobial effect. However, the effect on species richness and microbial composition after cooking was unclear. Ground chopi delayed lipid oxidation during manufacture and the effect was dependent on the addition level. Fermentation reduced the species richness with a dominancy of lactic acid bacteria. The profile of microbiota in the raw batter was different from other stages, while the closest relationship was observed after cooking and drying. Proteobacteria was predominant, followed by Firmicutes and Bacteroidetes in raw samples. Firmicutes became dominating after fermentation and so forth, whereas other predominant phylum decreased. At genus level, unclassified Lactobacillales was the most abundant group found after fermentation and so forth. Therefore, the overall microbial composition aspects were mainly controlled during fermentation by the abundance of lactic acid bacteria, while bacterial counts and lipid oxidation were controlled by cooking and the addition of ground chopi.

우울증의 새로운 신경생물학 (The New Neurobiology of Depression)

  • 김용구
    • 생물정신의학
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    • 제8권1호
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    • pp.3-19
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    • 2001
  • Recent basic and clinical studies demonstrate a major role for neural plasticity in the etiology and treatment of depression and stress-related illness. The neural plasticity is reflected both in the birth of new cell in the adult brain(neurogenesis) and the death of genetically healthy cells(apoptosis) in the response to the individual's interaction with the environment. The neural plasticity includes adaptations of intracellular signal transduction pathway and gene expression, as well as alterations in neuronal morphology and cell survival. At the cellular level, repeated stress causes shortening and debranching of dendrite in the CA3 region of hippocampus and suppress neurogenesis of dentate gyrus granule neurons. At the molecular level, both form of structural remodeling appear to be mediated by glucocorticoid hormone working in concert with glutamate and N-methyl-D-aspartate(NMDA) receptor, along with transmitters such as serotonin and GABA-benzodiazepine system. In addition, the decreased expression and reduced level of brain-derived neurotrophic factor(BDNF) could contribute the atrophy and decreased function of stress-vulnerable hippocampal neurons. It is also suggested that atrophy and death of neurons in the hippocampus, as well as prefrontal cortex and possibly other regions, could contribute to the pathophysiology of depression. Antidepressant treatment could oppose these adverse cellular effects, which may be regarded as a loss of neural plasticity, by blocking or reversing the atrophy of hippocampal neurons and by increasing cell survival and function via up-regulation of cyclic adenosine monophosphate response element-binding proteins(CREB) and BDNF. In this article, the molecular and cellular mechanisms that underlie stress, depression, and action of antidepressant are precisely discussed.

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The Genetic Diversity of Trans-caucasian Native Sheep Breeds

  • Hirbo, Jibril;Muigai, Anne;Naqvi, A.N.;Rege, E.D.;Hanotte, Olivier
    • Asian-Australasian Journal of Animal Sciences
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    • 제19권7호
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    • pp.943-952
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    • 2006
  • The genetic variation in 10 indigenous Caucasian sheep breeds was studied with 14 micro-satellite loci in order to determine the genetic diversity among and between the breeds. Five breeds from Asia, five breeds from Europe and one breed from Africa, were included in order to study any relationships or influences they may have with the Caucasian sheep analyzed. A Karakul population from Uzbekistan was included in the study to see whether there was any Central Asian influence. All the 14 loci were found to be polymorphic in all the breeds, with the exception of ILST0056, which was monomorphic in Imeretian. A total of 231 alleles were generated from all the 688 individuals of the sheep analyzed. The mean number of alleles (MNA) at each locus was 16.5. The total number of alleles detected in all samples ranged from 13 in several loci to 23 in OarJMP029. Out of total 308 Hardy-Weinberg Equilibrium (HWE) tests, 85 gave significant results. After Bonferroni correction for multiple tests, 30 comparisons still remained significant to the experimental levels. The Gala population was the most diverse and Imeretian the least diverse with a MNA of 8.50 and 5.51, respectively. Gene diversity estimates exhibited the same trend and ranged from 0.803 in Gala and 0.623 in Imeretian, but generally there is higher diversity among the Caucasian breeds in comparison to other eference breeds. The closest breeds were Tushin and Bozakh with Da of 0.113 and most distant breeds were $Djallonk{\acute{e}}$ and North Rondalsy with Da of 0.445. Principal Component (PC) analyses were done. PC1 described 14% of the differences. PC2, which described 13% of the differences, further separated the Caucasian breeds from Asian breeds except Karakul and Awasi, and the two British breeds. PC3 described 10% of the differences, allowing better differentiation of the Caucasian breeds. A moderate degree of reliability was observed for individual-breed assignment from the 14 loci using different approaches among which the Bayesian method proved to be the most efficient. About 72% of individuals analyzed were correctly assigned to their respective breeds.

Morphological and Molecular Characterization of Desportesius invaginatus (Nematoda: Acuariidae) from Egretta garzetta and Bubulcus ibis in Korea

  • Lee, Seo-In;Hong, Eui-Ju;Kim, Hyeon-Cheol;Ryu, Si-Yun;Park, Bae-Keun
    • 한국임상수의학회지
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    • 제38권2호
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    • pp.75-81
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    • 2021
  • An aquariid nematode, Desportesius invaginatus, was found in the proventriculus of an Egretta garzetta and a Bubulcus ibis from Chuncheon in the Republic of Korea. The worms were identified by light and scanning electron microscopy based on important taxonomic characteristics (body length, esophagus length, cordons, spicules, caudal alae of males, position of the vulva) and then phylogenetically analyzed using the 18S rRNA encoding gene. The nematodes were characterized by a body length of 7.0-8.0 mm in males and 10.2-13.1 mm in females, and two pairs of cordons recurrent in the anterior direction, and cordons were anastomosed by a longitudinal cuticular ridge that externally delimits a longitudinal canal. The widest cuticular plates of cordons bears over 20 posterior spines. The length of the spicules in males was also significantly different. The right spicule measured 742-821 (794) ㎛ in length and 40-45 (42) ㎛ in width, and the left spicule measured 493-556 (541) ㎛ in length and 11-13 (12) ㎛ in width. The caudal alae of males are inflated and vesicular in appearance. The vulva was situated at 56-71 (58.3) ㎛ from the posterior extremity. Although the 18S rRNA sequences of worms were similar to the Synhimantus species, some genetic divergences were observed in comparison. In this study, the worms were recognized with genus Desportesius because genus Desportesius was considered a subgenus of Synhimantus. This is the first record of D. invaginatus in the Republic of Korea.

Profiles of Non-aureus Staphylococci in Retail Pork and Slaughterhouse Carcasses: Prevalence, Antimicrobial Resistance, and Genetic Determinant of Fusidic Acid Resistance

  • Yang, Yu Jin;Lee, Gi Yong;Kim, Sun Do;Park, Ji Heon;Lee, Soo In;Kim, Geun-Bae;Yang, Soo-Jin
    • 한국축산식품학회지
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    • 제42권2호
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    • pp.225-239
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    • 2022
  • As commensal colonizers in livestock, there has been little attention on staphylococci, especially non-aureus staphylococci (NAS), contaminating meat production chain. To assess prevalence of staphylococci in retail pork and slaughterhouse carcass samples in Korea, we collected 578 samples from Korean slaughterhouses (n=311) and retail markets (n=267) for isolation of staphylococci and determined antimicrobial resistance phenotypes in all the isolates. The presence of and prevalence of fusB-family genes (fusB, fusC, fusD, and fusF) and mutations in fusA genes were examined in fusidic acid resistant isolates. A total of 47 staphylococcal isolates of 4 different species (Staphylococcus aureus, n=4; S. hyicus, n=1; S. epidermidis, n=10; Mammaliicoccus sciuri, n=32) were isolated. Fusidic acid resistance were confirmed in 9/10 S. epidermidis and all of the 32 M. sciuri (previously S. sciuri) isolates. Acquired fusidic acid resistance genes were detected in all the resistant strains; fusB and fusC in S. epidermidis and fusB/C in M. sciuri. Multi-locus sequence type analysis revealed that ST63 (n=10, 31%) and ST30 (n=8, 25%) genotypes were most prevalent among fusidic acid resistant M. sciuri isolates. In conclusion, the high prevalence of fusB-family genes in S. epidermidis and M. sciuri strains isolated from pork indicated that NAS might act as a reservoir for fusidic acid resistance gene transmissions in pork production chains.

Population genetic analysis of Plasmodium vivax vir genes in Pakistan

  • Sylvatrie-Danne Dinzouna-Boutamba;Zin Moon;Sanghyun Lee;Sahib Gul Afridi;Huong Giang Le;Yeonchul Hong;Byoung-Kuk Na;Youn-Kyoung Goo
    • Parasites, Hosts and Diseases
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    • 제62권3호
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    • pp.313-322
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    • 2024
  • Plasmodium vivax variant interspersed repeats (vir) refer to the key protein used for escaping the host immune system. Knowledge in the genetic variation of vir genes can be used for the development of vaccines or diagnostic methods. Therefore, we evaluated the genetic diversity of the vir genes of P. vivax populations of several Asian countries, including Pakistan, which is a malaria-endemic country experiencing a significant rise in malaria cases in recent years. We analyzed the genetic diversity and population structure of 4 vir genes (vir 4, vir 12, vir 21, and vir 27) in the Pakistan P. vivax population and compared these features to those of the corresponding vir genes in other Asian countries. In Pakistan, vir 4 (S=198, H=9, Hd=0.889, Tajima's D value=1.12321) was the most genetically heterogenous, while the features of vir 21 (S=8, H=7, Hd=0.664, Tajima's D value =-0.63763) and vir 27 (S =25, H =11, Hd =0.682, Tajima's D value=-2.10836) were relatively conserved. Additionally, vir 4 was the most genetically diverse among Asian P. vivax populations, although within population diversity was low. Meanwhile, vir 21 and vir 27 among all Asian populations were closely related genetically. Our findings on the genetic diversity of vir genes and its relationships between populations in diverse geographical locations contribute toward a better understanding of the genetic characteristics of vir. The high level of genetic diversity of vir 4 suggests that this gene can be a useful genetic marker for understanding the P. vivax population structure. Longitudinal genetic diversity studies of vir genes in P. vivax isolates obtained from more diverse geographical areas are needed to better understand the function of vir genes and their use for the development of malaria control measures, such as vaccines.

육계의 에너지 제한 사양에 따른 지방 합성 및 근육 발달 관련 유전자의 발현 양상 비교 분석 (Analysis of Lipogenic and Myogenic Gene Expressions in Energy Restricted Broiler Chickens)

  • 문양수
    • 한국가금학회지
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    • 제36권4호
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    • pp.301-309
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    • 2009
  • 본 연구는 육계에서 사료의 제한 급이 조건과 생체 내 지방 합성 및 근육 발달 관련 유전자들의 발현 양상을 비교 분석하기 위해여 실시하였다. 본 시험은 육계 Ross 종을 3처리 5반복 반복당 4수씩 완전 임의 배치하였으며, 7일령에 에너지제한 15%(ER85)와 30%(ER70)으로 하여 1주일간 제한 사양을 실시하였다. 제한 급이 이후 시험 종료까지(35일령)는 자유 급이를 실시하였다. 대조구는 전 사양 기간 동안 자유급이를 실시하였다. 에너지를 8일령부터 1주일간 제한 급이한 결과 대조구에 비하여 11.0%(ER85)와 30.8%(ER70) 각각 체성장이 낮게 나타났다. 제한 사양 후 3주간의 자유 급이 결과 ER85는 대조구와 같이 체성장을 이루어 보상 성장이 유도되었으나, ER70의 경우 대조구의 체성장보다 약 7.3% 낮게 나타나 보상 성장이 충분히 이루어지지 않았다. 제한 사양 후 콜레스테롤의 함량은 대조구에 비하여 40.6%(ER85)와 38.1%(ER70) 감소하였으나(P<0.05), 처리구간에는 유의적 차이를 나타내지 않았다. 중성지방 또한 대조구와 비교하여 64.5%(ER85), 49.5%(ER70) 각각감소하였다. 혈중포도당은 지방 성분들과 같은 경향으로 대조구에 비하여 34.5%(ER85), 27.7%(ER70) 각각 낮은 수준을 보였다. 보상 성장의 결과 혈중 콜레스테롤의 함량은 제한 사양 직후 대조구보다 낮은 수준에서 대조구와 같은 수준을 보였다. 혈중 중성지방은 대조구와 비교하여 처리구에서 102.3%(ER85)와 72.1%(ER70)의 높은 함량을 보여주어 제한 사양 직후와 상반된 결과를 보여 주었다. 혈중 포도당의 경우 ER70 처리구에서 비교적 높은 혈중 함량을 보였으며, 대조구와 ER85 그리고 처리구 간에는 유의적 차이를 보이지 않았다. 제한 사양 직후 FAS와 SREBP와 PPARr의 발현 양상은 ER70구에서 이들 유전자들의 발현이 감소하였을 뿐 대조구와 ER85구에서는 서로간의 차이를 볼 수 없었다. 제한 사양 후 14일령에 근육관련 유전자의 발현 양상은 대조구에 비해 모든 처리구에서 발현율이 낮게 나타났다. 보상 성장 후 ER85 처리군에서 Myogenin은 대조구와 ER70에 비하여 높은 발현을 보였다. 이상의 결과로부터 육계에서 보상 성장 및 근육 발달 관련 유전자들의 발현 양상을 고려할 때, 에너지 제한 15%(ER85) 수준이 적절한 제한 급이 방법으로 사료된다.

Effects of taurine and ginseng extracts on energy metabolism during exercise and their anti-fatigue properties in mice

  • Kim, Jisu;Beak, Suji;Ahn, Sanghyun;Moon, Byung Seok;Kim, Bom Sahn;Lee, Sang Ju;Oh, Seung Jun;Park, Hun-Young;Kwon, Seung Hae;Shin, Chul Ho;Lim, Kiwon;Lee, Kang Pa
    • Nutrition Research and Practice
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    • 제16권1호
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    • pp.33-45
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    • 2022
  • BACKGROUND/OBJECTIVES: Ginseng extract (GSE) and taurine (TR) are widely used antifatigue resources in functional foods. However, the mechanism underlying the antifatigue effects of GSE and TR are still unclear. Hence, we investigated whether GSE and TR have synergistic effects against fatigue in mice. MATERIALS/METHODS: L6 cells were treated with different concentrations of TR and GSE, and cell viability was determined using 2-(4-iodophenyl)-3-(4-nitrophenyl)-5-(2,4-disulfophenyl)-2H-tetrazolium. Oxidative stress was analyzed by immunocytochemistry using MitoTrackerTM Red FM and an anti-8-oxoguanine antibody. Respiratory gas analysis was performed to investigate metabolism. Expression of an activated protein kinase was analyzed using immunohistochemistry. Gene expression of cluster of differentiation 36 and pyruvate dehydrogenase lipoamide kinase isozyme 4 was measured using reverse transcription-polymerase chain reaction. Mice were orally administered TR, GSE, or their combination for 30 days, and then fatigue-related parameters, including lactate, blood urea nitrogen, and glycogen, were measured after forced swimming. RESULTS: TR and GSE reduced oxidative stress levels in hydrogen peroxide-stimulated L6 cells and enhanced the oxygen uptake and lipid metabolism in mice after acute exercise. After oral administration of TR or GSE for 30 days, the fatigue-related parameters did not change in mice. However, the mice administered GSE (400 mg/kg/day) alone for 30 days could swim longer than those from the other groups. Further, no synergistic effect was observed after the swimming exercise in mice treated with the TR and GSE combination for 30 days. CONCLUSIONS: Taken together, our data suggest that TR and GSE may exert antifatigue effects in mice after acute exercise by enhancing oxygen uptake and lipid oxidation.

보육시설 유아 사용 수건의 미생물 분포 및 독소 특성 (Prevalence and Toxin Characteristics of Microorganism on Hand Towels Using for Children in Child Care Center)

  • 김중범;김난영;강석호;도영숙;엄미나;윤미혜;이정복
    • 한국식품위생안전성학회지
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    • 제28권2호
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    • pp.138-145
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    • 2013
  • 어린이집 유아들이 공용으로 사용하는 수건의 미생물 오염도와 분리된 식중독 미생물의 장독소 유전자 및 장독소 생산 특성을 분석하여 어린이집 유아 사용 수건의 위생안전성을 확보하고자 어린이가 손 씻은 후 공용으로 사용하는 수건 22개 (사용 전 7개, 사용 중 15개)를 연구대상으로 하였다. 일반세균수는 평균 6.2 log CFU/100 $cm^2$로 검출되었고 진균수는 평균 4.1 log CFU/100 $cm^2$로 검출되었으며 대장균군은 사용 전 수건의 경우 7건 중 4건 (57.1%), 사용 중인 수건의 경우 15건 모두에서 (100%) 검출되었다. 어린이 사용 수건의 미생물 오염도가 높게 나타나 수건의 위생적인 살균 세탁 및 상대습도가 낮은 곳에 보관하는 등의 보관 방법 개선이 필요한 것으로 판단되었다. Salmonella spp.의 경우 실험에 사용된 모든 수건에서 검출되지 않았으나, Staph. aureus는 22건 중 5건 (22.7%), B. cereus는 11건 (50.0%)에서 검출되어 B. cereus 오염이 가장 심각한 것으로 나타났다. Staph. aureus 장독소 유전자와 독소 단백질은 모두 불검출 되었으나 분리 동정된 11균주의 B. cereus 장독소 유전자 실험 결과 hblC, hblD, hblA 유전자가 각각 72.7, 72.7, 54.5% 검출되고 nheA, nheB, nheC 유전자가 각각 81.8, 72.7, 54.5% 검출되었으며 cytK, entFM 장독소 유전자는 각각 45.5, 90.0% 검출되었다. B. cereus 장독소 실험결과 HBL 장독소는 11균주 중 8균주 (72.7%), NHE 장독소는 5균주 (45.5%) 검출되었고 HBL과 NHE 장독소 중 하나 이상을 생산하는 B. cereus 균주는 10균주 (90.9%)로 나타났다. 수건에 오염된 B. cereus 균주의 교차오염에 따른 식중독 위험성이 상존하는 것으로 나타나 개인별 수건 또는 종이 타올 사용을 고려하여야 할 것으로 판단되었다.

유통 중인 즉석·편의식품류에서 분리한 Bacillus cereus의 산생 Toxin 및 분자유전학적 특성 조사 (Molecular Characterization and Toxin Profile of Bacillus cereus Strains Isolated from Ready-to-eat Foods)

  • 김태순;김민지;강유미;오그네;최수연;오무술;양용식;서정미;류미금;김은선;하동룡;조배식
    • 한국식품과학회지
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    • 제46권3호
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    • pp.334-340
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    • 2014
  • 즉석섭취 편의식품은 일반적으로 소비자가 별도의 조리과정 없이 직접 신선한 상태로 섭취하기 때문에 병원성 미생물에 오염되어 있을 경우 식중독을 일으킬 수 있다. 특히 B. cereus는 자연계에 널리 분포하여 대부분의 식품에 쉽게 오염되어 식중독을 유발 시킬 수 있는 독소형 식중독균 중의 하나이다. 이에 본 연구는 유통 판매중인 즉석섭취 편의식품류 및 식중독이 발생하여 의뢰된 보존식에서 B. cereus의 분리율 및 독소 종류의 분포형태를 파악하였다. 식품 총 619건 중 263건(42.5%)의 B. cereus를 분리하였지만, 식품의약품안전처의 식품공전에서 즉석섭취 편의식품류에 대한 B. cereus에 대한 규격기준이 1,000 CFU/g 이하로, 본 실험에서는 규정 범위를 초과한 식품은 없었다. B. cereus 총 263개 분리균주에 대한 9종류의 장내독소 및 1종류의 구토독소를 분석한 결과, NHE complex (nheA, nheB, nheC)중 3개의 nhe 유전자를 모두 보유한 B. cereus는 236개 균주(89.7%), 1개만의 독소를 가지고 있는 균주는 2개(0.8%)뿐이었다. 또한, HBL complex (hblA, hblB, hblD) 중 3개의 hbl 유전자를 보유한 균주는 175개 균주(66.5%), 그리고 한개 혹은 두 개의 hbl 유전자를 가진 균주는 59개 균주(21.7%), 3개 유전자를 모두 가지고 있지 않은 균주는 29개 분리균주(11.0%)로 나타났다. NHE complex 유전자의 빈도가 HBL complex 유전자 보다 더 높게 나타나는 특징을 확인할 수 있었다. 장내독소 entFM, $cytK_2$, bceT 유전자의 보유율은 각각 100, 100, 43.0% 순으로 확인되었다. B. cereus의 구토 독소인 CER 유전자는 평균 50.2%를 보유하고 있었으며, 식품유형에 따라 식중독 보존식, 즉석섭취 식품, 편의식품에서 각각 100, 59.4, 35.6% 순으로 나타났다. 식품 중 분리한 B. cereus가 산생하는 구토독소를 가지고 있는 B. cereus 균주 중 29.4%에서 8개의 장내독소를 보유하고 있었으며, 나머지 균주들도 대부분 5-8개의 장내독소를 가지고 있는 것으로 확인되었다. 따라서 본 연구 결과를 종합해보면, 식품에서 분리한 B. cereus는 대부분의 균주가 설사형 및 구토형 독소를 보유하고 있어, 즉석 섭취 편의식품의 미생물 오염 요인들은 계절에 관계없이 지속적으로 위생적인 관리가 필요할 것으로 사료된다. 또한, 식품의 미생물적 안전성 확보를 위해서는 업체의 생산단계부터 저장 및 운반을 포함한 유통단계 등에서 식중독을 유발 할 수 있는 오염원들이 내재되어 있기 때문에 철저한 개인 및 환경 위생관리가 필요할 것으로 사료된다.