• Korean journal of applied entomology
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• v.39 no.3
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• pp.181-191
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• 2000

We have sequenced a portion of mitochondrial CO! gene (403 bp) of the firefly, Pyrocoelia rufa, to investigate genetic diversity within population, geographic variation, and phylogenetic relationships among haplotypes. A total of seven mtDNA haplotypes ranging in sequence divergence from 0.2% to 1.2% were obtained from 26 fireflies collected at four localities in Korea: Namhae, Pusan, Muju, and Yongin. The samples collected at the urban area, Pusan, were all fixed with one haplotype, differently those collected at the forest and/or agricultural areas. This appears to suggest that habitat fragmentation and population bottleneck caused by urbanization might have been severe in Pusan. On the other hand, from Muju known as the largest habitat and sanctuary for the firefly, four haplotypes with the maximum sequence divergence of 1.0% were obtained, and this estimate was the highest among the areas studied. The fireflies collected at the isolated islet, Namhae, revealed relatively low haplotype diversity(H=0.25), but one haplotype (PR7) was phylogenetically differentiated from others. This phenomenon was explained in terms of biogeographic history of the island and gene flow in the recent past. Grouping of Muju- Y ongin and Pusan-Namhae, respectively, in the hierarchical genetic analysis suggests the presence of historically occurred, biogeographic barrier against gene flow between them.

• Current Research on Agriculture and Life Sciences
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• v.13
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• pp.45-53
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• 1995

This research was conducted to investigate morphological and genetic variation of Allium victorialis val. platyphyllum which growed wild in Mt. Hambaek, Mt. Odae, and Ullungdo. The tree layer of Allium victorialis var. platyphyllum community in Mt. Hambaek and Mt. Odae was dominated by Quercus mongolica. The tree layer of Ullungdo generally consist of Fagus crenata var. multinervis, Acer triflorum, Sorbus commixta, and Tilia insularis. In the herb layer, Rumohra standishii, Trillium tschonoskii, and Lilium hansonii are common at Allium victorialis var. platyphyllum community in Ullungdo. The vegetation in Ullungdo was widely different from those in Mt. Hambaek and Mt. Odae by species composition. The result of Principal Component Analysis(PCA) and Canonical Discriminent Analysis of by the 8 characters showed that Allium victorialis var. platyphyllum could be classified into 2 groups: (one ; Mt. Hambaek and Mt. Odae, the other ; Ullungdo). In PCA, the major factors in the first principal component group was angle of leaf apex. Variation of band by isozyme GOT(glautamate oxaloaccetate transaminase) is similar between Mt. Hambaek and Mt. Odae. However, Ullungdo differed from Mt. Hambaek and Mt. Odae in variation of bands.

• Journal of Life Science
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• v.24 no.6
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• pp.612-617
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• 2014

The phenetic relationships among six natural populations of Equisetum pratense in Korea were investigated at the population level by constructing a tree based on Random Amplified Polymorphic DNA (RAPD) markers. RAPD analysis was also conducted to estimate genetic diversity and the population structure of E. pratense. A mean of 26.7% at the six population levels indicated polymorphism. E. pratense was found to have fewer alleles per locus (1.267) and fewer effective alleles per locus (1.176). Genetic diversity (0.102) in E. pratense is lower than the average for species with similar life history traits. Total genetic diversity values (HT) varied between 0.112 (OPD-07) and 0.445 (OPD-16), for an average overall polymorphic locus of 0.141. Inter-locus variation in the within-population genetic diversity ($H_S$) was low (0.102). Asexual reproduction, small population size, and the colonization process are proposed as possible factors contributing to the observed low genetic diversity in E. pratense. On a per-locus basis, the proportion of total genetic variation due to differences among populations ($G_{ST}$) ranged from 0.129 for OPD-07 to 0.455 for OPD-09, with a mean of 0.277. This indicated that about 27.7% of the total variation was among populations. Thus, genetic variation (72.3%) resided within populations. This study contributes new information for research on the taxonomy and population genetics of E. pratense.

• Proceedings of the Korean Society Of Semiconductor Equipment Technology
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• 2005.05a
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• pp.151-156
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• 2005

본 논문에서는 비선형 역학 시스템에서 복합적 지능 알고리즘을 이용하여 시스템의 제어 성능을 개선시키는 방법에 대하여 논의하였다. 기존의 비선형 제어를 위한 뉴럴 네트워크 및 유전자 알고리즘은 학습이 종료된 후에 고정된 상태에서는 훌륭한 제어를 보여주지만, 환경 변화와 같은 변이 인자가 발생되면 제어가 제대로 되지 않으며 재학습을 해야만 한다. 이때 재학습에 드는 시간이 많이 걸리는 문제점이 있다. 제안하는 시스템에서는 변이 인자가 발생되었을 때의 상황을 항원으로 하는 면역 시스템을 기존 제어시스템에 추가하여 사용함으로써 보다 안정적이며 빠른 제어 수행이 가능함을 보일 것이다. 또한 기존에 하드웨어로 구성하기 어려웠던 유전 알고리즘을 하드웨어로 구성하기 쉽도록 유전 인자를 메모리 주소로 하는 알고리즘을 만들게 되었다.

• The Zoological Society Korea : Newsletter
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• v.12 no.2
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• pp.79.1-79
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• 1995

• Proceedings of the Zoological Society Korea Conference
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• 1995.10b
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• pp.125.1-125
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• 1995

• Proceedings of the Korean Society of Environment and Ecology Conference
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• 2003.04a
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• pp.27-31
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• 2003

• Journal of Life Science
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• v.21 no.10
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• pp.1434-1442
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• 2011

A genetic variation within 29 strains of F. velutipes was analyzed by internal transcribed spacer (ITS) sequence analysis and random amplified polymorphic DNA (RAPD). Seven hundred and twenty base pairs were sequenced during the analysis of the ITS region, but no significant variation was observed among the 29 strains of F. velutipes. Sixteen out of 40 random primers amplified polymorphic RAPD fragment patterns. The polymorphic levels of RAPD bands by some primers (OPA-2,4,3,9,10,20) were very high in all 29 strains, with 3,030 fragments ranging between 200 and 2,000 bp. Intraspecific genetic dissimilarity of the 29 strains was calculated to range from 3.3% to 45% by Nei-Li's method using these 3,030 RAPD bands. The genetic variation among Korean strains was relatively high, with dissimilarities ranging between 17% and 38.6%. In the Neighbor-Joining analysis using the genetic dissimilarities based on RAPD, all 29 strains were classified into 5 clusters. Strains in each cluster showed specific characteristics according to their origin and strains. These results suggested that OPA and OPB primers could be used for developing molecular genetic markers and screening of unidentified (F. velutipes) strains.

• The Korean Journal of Malacology
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• v.29 no.4
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• pp.335-341
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• 2013

The seven mitochondrial DNA regions (ND2, ND5, ND4, ND4L, ND6, ND1 and 12SrRNA) of Haliotis discus hannai were examined to estimate the availability as a genetic marker for the study of population genetic. The region with the highest genetic variation was ND4 (Haplotype diversity = 1.0000, Nucleotide diversity = 0.0108). On the other hand, ND2 and ND1 regions have significantly appeared genetic divergence between clusters (divergence of 90% and 87%). Also, pairwise $F_{ST}$ between clusters within ND2 and ND1 regions showed high values; 0.4061 (P = 0.0000), 0.4805 (P = 0.0000) respectively. Therefore we can infer that it is the most efficient and accurate way to analyze the region of ND4 with the highest variation in addition to the regions of ND2 and ND1, which formed clusters with high bootstrap value, for study of population genetic structure in this species.

• Proceedings of the Korean Institute of Intelligent Systems Conference
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• 2004.10a
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• pp.169-172
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• 2004

유전 알고리듬은 NP-Hard 문제의 해결이나, 함수 최적화, 복잡한 제어기의 파라미터 값 추적 등, 광범위한 분야에 걸쳐 이용되고 있다 일반적인 유전 알고리듬은 적합도 함수를 통해 해들의 품질을 결정하고, 해들의 품질에 따라 선택 연산을 거쳐, 교차나 돌연변이를 통해 우수한 품질의 해를 찾는 과정을 가진다 현재 이 과정은 대부분 소프트웨어적으로 구현되어 범용 프로세서를 통해 수행된다. 그러나 높은 소프트웨어 의존성은 해집단의 크기가 커질수록 교차/변이 연산과 해들의 품질비교에 수행되는 시간을 크게 증가시키는 약점이 있다. 따라서 본 논문에서는 순위 기반 선택과 일점 교차(one-point crossover)를 사용한다는 제약하에, 해들의 순위를 정렬 네트워크를 통해 결정하고 해들을 Residue Number System(RNS)로 표현하여 하드웨어적으로 교차연산을 처리하는 프로세서 구조를 제안한다 이러한 접근을 통해 해들의 품질비교에 걸리는 시간을 크게 줄이고 교차/변이 연산의 효율을 높일 수 있다.