• Title/Summary/Keyword: 유전자집단

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Screening of Chicken Genes Related to Germ Cell Development (닭에서 생식세포 발달에 관여하는 유전자 검색)

  • Lee, Jee-Young;Kim, Hee-Bal;Kim, Duk-Kyung;Song, Ki-Duk;Lim, Jeong-Mook;Han, Jae-Yong
    • Journal of Animal Science and Technology
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    • v.49 no.2
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    • pp.183-194
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    • 2007
  • We examined the expression patterns of the chicken TCs(tentative consensus sequences) originated from GermOnline genes in various chicken tissues, applying information from GermOnline to chicken organisms. 42 TCs among 84 chicken homologous TCs from the pool of 84 genes related to germ cell lineage in mouse(10), rat(71) and human(3) had high homology based on a BLAST search. Of these, Hmgcs2 and Sycp3 was shown to be expressed in a testis- specific manner and a reproductive organ(testis and ovary)-specific manner, respectively, by RT- PCR analysis. Crmp4, Cyct, Ldhc, Epha7, Pcsk4 and Dnmt3a are expressed in brain, testis, and ovary. The characterization of chicken genes originated from GermOnline in this research may give an enormously useful source of information related to germ cell development.

First Report of the Fall Armyworm, Spodoptera frugiperda (Smith, 1797) (Lepidoptera, Noctuidae), a New Migratory Pest in Korea (한국에서 새로운 비래해충 열대거세미나방, Spodoptera frugiperda (Smith) 최초 보고)

  • Lee, Gwan-Seok;Seo, Bo Yoon;Lee, Jongho;Kim, Hyunju;Song, Jeong Heub;Lee, Wonhoon
    • Korean journal of applied entomology
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    • v.59 no.1
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    • pp.73-78
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    • 2020
  • The fall armyworm, Spodoptera frugiperda (Smith, 1797), originated from tropical and subtropical America is one of sporadic agricultural pests in the world. Since the moth has high migration capacity, it rapidly expanded the world distribution such as Africa in 2016, India in 2018, and East-Asian countries in 2019. In Korea, this species was firstly found at maize fields of Jeju Island, in early June 2019, and subsequently detected at many counties of Jeolla-do and Gyeongsang-do in June and July 2019. The first invaded populations of S. frugiperda in Korea were genetically confirmed as one species, S. frugiperda by using a mitochondrial cytochrome oxidase subunit I (COI) gene, and analyzed to be comprised of two haplotypes (hap-1 and hap-2) each belonging to different clades. Among 31 COI sequences, the hap-1 sequence was predominant, accounting for 93.5%.

A case study of the habitat expansion of the Asiatic black bear (Ursus thibetanus ussuricus) (반달가슴곰의 서식지 확대 사례)

  • Kim, Jeong-Jin;Kim, Tae-Wook;Choi, Ju-Yeol;Park, Seok-Ho;Han, Sang-Hyun;Lee, Sa-Hyun;Oh, Hong-Shik
    • Korean Journal of Environmental Biology
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    • v.37 no.2
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    • pp.196-203
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    • 2019
  • Habitat loss by industrialization, urbanization, and poaching reduced the population of Asiatic black bear (Ursus thibetabus ussuricus) population in South Korea in the late 20th Century. In the early 2000s, the Korean Government had begun a restoration project of Asiatic black bear. In 2017, a bear was found in Mt. Sudosan, Gimcheon, Gyeongsangbuk-do, approximately 80 km from Mt. Jirisan where the bear was first released. Genetic analysis confirmed that this bear was one of the Jirisan bear population, estimating that this bear escaped from its habitat. After trapping this bear in Mt. Sudosan, it was rereleased again in Mt. Jirisan, but this bear moved again to Mt. Sudosan. After 2nd trapping and releasing, this bear came back to Mt. Sudosan. In Mt. Sudosan, this bear covered a greater distance and moved more as compared to other Asiatic black bear in Mt. Jirisan. Today, this bear has its home range within Mt. Sudosan area after the third release, estimating that this bear is stable and active in this area. Our findings are the first case showing the interesting pattern of repetitive disperse activities and habitat expansion of Asiatic black bear. The results of this case are valuable information that can be used for wildlife conservation and restoration of endangered wildlife.

Basic Studies on the Breeding of Fiber Flax (Linum usitatissimum L.) in Korea (섬유용 아마(Linum usitatissimum L.)의 육종에 관한 기초적 연구)

  • Kyu-Yong Chung
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.19
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    • pp.83-99
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    • 1975
  • The earliness to flowering was completely dominant over the lateness, and the short plant height and stem length were partially dominant over the tall. The heavy stem weight, however, was recessive to the light. Heritability values for the flowering period, plant height, dry stem weight and fiber ratio were high, while those of days to initial flowering, stem length and fiber weight were low. Flowering period, plant height, stem weight, dry stem weight and fiber ratio were closely related to fiber weight or fiber yield. The selection index estimated jointly the plant height ($X_1$), dry stem weight($X_2$) and fiber weight($X_3$); that is 0.0020$X_1$-0.0047$X_2$-0.0181$X_3$, was the most efficient one for the selection practices. The plant height was the most reliable character for the increased genetic advances and the relative selection efficiences. Effects of locations and genotype-environment interactions were highly significant in most of the characters investigated.

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Genetic Analysis of Quantitative Characters by Diallel Cross in Cotton (목화의 F2잡종집단에 대한 유전분석)

  • 정원복
    • Journal of Life Science
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    • v.12 no.2
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    • pp.213-218
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    • 2002
  • The experiment was conducted to get basic information for cotton breeding program through four-variety diallel cross population. Additive, dominant, maternal, and reciprocal effect were observed significantly for days to maturity. Based on the Vr-Wr graphical analysis, the characters, number of bolls per plant, boll weight, seed and lint weight per boll, lint weight per boll, width of seed, 100-seed weight, days to flowering, and days to maturity were found to inherit incomplete dominance, and the characters of number of bolls per plant, width of seed, number of seeds per boll, and length of seed were assumed to inherit over dominance. The component of genetic variance analysis for boll weight, seed and lint weight per boll, lint weight per boll, number of seeds per boll, length of seed, and days to flowering showed that additive effects were higher than dominant effects. The narrow-sense heritability(h$_2$N) for boll weight, seed and lint weight per boll, lint weight per boll, days to flowering, and days to maturity showed high values as more than 43.19%. The estimate of broad-sense heritability(h$_2$B) value was higher than that of h$_2$N because of the low importance of dominance effects.

Molecular Typing of Legionella pneumophila Isolated in Busan, Using PFGE (부산지역에서 분리한 레지오넬라균에 대한 PFGE를 이용한 molecular typing)

  • Park Eun-Hee;Kim Mi-Hee;Kim Joung-A;Han Nan-Sook;Lee Ju Hyeoun;Min Sang Gi;Park Yon Koung;Jin Seong Hyun;Jeong Gu Young;Bin Jae Hun
    • Journal of Life Science
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    • v.15 no.2 s.69
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    • pp.161-168
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    • 2005
  • In this study, we did the molecular typing of 39 environmental Legionella pneumophila serogroup 1 isolates collected from 2001-2003 in Busan using the pulsed-filed gel electrophoresis (PFGE). PFGE of SfiI fragments were divided into 10 pulsotypes $(A\~J)$, corresponding to $<65\%$ similarity and a subtype within each pulsotype was characterized by $>84\%$ similarity. The major cluster was pulsotype E $(46.2\%)$, which included 18 isolates and was divided into 4 subtypes $(E1\~E4)$. PFGE of NotI fragments were divided into 8 pulsotypes $(a\~h)$, corresponding to $<60\%$ similarity and a subtype within each pulsotype was characterized by $100\%$ similarity. The major cluster was pulsotype f $(38.5\%)$, which included 15 isolates. The ATCC type strain L. pneumophila serogroup 1 was identified as a different molecular pulsotype compare to the Busan isolates. It is possible that L. pneumophila serogroup 1 isolated in Busan with specific DNA pattern is comparable with those isolation in other cities in Korea.

Development of RAPD Marker Related to Brown Planthopper Resistance Gene Derived from Rice Cultivar, Cheongcheongbyeo (청청벼에서 유래한 벼멸구 저항성관련 RAPD Marker의 개발)

  • Seo Ji-Hun;Kim Kyung-Min;Kim Suk-Man;Sohn Jea-Keun
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.50 no.6
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    • pp.453-456
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    • 2005
  • This study was carried out to select DNA markers closely linked to brown planthopper (BPH) resistance gene originated from a rice cultivar 'Cheongcheong­byeo'. For the mapping of resistant gene to BPH, a doubled-haploid (DH) population was developed by anther culture of $F_1$ plants from a cross 'Cheongcheong­byeo/Nagdongbyeo'. In BPH bioassay and marker screen­ing for the DH population, the segregation of resistant and susceptible plants to BPH fitted to a 1:1 ratio. A total of 310 RAPDs of 520 markers showed polymorphism in parental survey using 'Cheongcheongbyeo' and 'Nag­dongbyeo'. In the analysis of relationship between BPH resistance and marker pattern for 40 DH lines, the OPE16 produced a specific dominant fragment, 700 bp, which was closely linked with BPH resistance gene of 'Cheong­cheongbyeo'. Based on the linkage analysis using 7 markers, BPH resistance of 'Cheongcheongbyeo' was mapped on chromosome 12, which was closely linked with $OPE16_{700}$ at a distance of 4.6 cM.

Genetic Analysis on Floury Endosperm Characteristics of 'Namil(SA)-flo1', a Japonica Rice Mutant Line (남일벼 돌연변이 후대 계통 'Namil(SA)-flo1'의 분질배유 특성에 대한 유전분석)

  • Mo, Young-Jun;Jeung, Ji-Ung;Kang, Kyung-Ho;Lee, Jeom-Sig;Kim, Bo-Kyeong
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.58 no.3
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    • pp.283-291
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    • 2013
  • Rice varieties with suitable flour-making quality are required to promote rice processed-food industry and boost rice consumption in Korea. 'Namil (SA)-flo1' is an advanced mutant line with floury endosperm which shows good flour-making quality under dry-milling process. Genetic analysis was carried out to localize the chromosomal region responsible for the floury endosperm of 'Namil (SA)- flo1'. By using 94 F2 progenies, which were derived from 'Namil (SA)-flo1' ${\times}$ 'Milyang 23', floury grains percentage was investigated as phenotypic data, and genotyping was conducted with 54 SSR markers. Association analysis showed that the target genetic region for floury endosperm is on middle-low region of chromosome 5. Through further association analysis with increased number of SSR markers on chromosome 5, we found that genotypic variation in RM164 explains 79.7% of the variation in floury grains percentage of F2:3 seeds. The floury endosperm locus was localized on 17.7-20.7 Mbp region of chromosome 5 and will be further analyzed for fine mapping and gene identification.

A PCR Denaturing Gradient Gel Electrophoresis (DGGE) Analysis of Intestinal Microbiota in Gastric Cancer Patients Taking Anticancer Agents (PCR-DGGE를 통해 분석한 항암치료에 따른 장내 미생물 변화)

  • Yu, Sun Nyoung;Ahn, Soon Cheol
    • Journal of Life Science
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    • v.27 no.11
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    • pp.1290-1298
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    • 2017
  • Intestinal microbiota is an important factor in the development of immune defense mechanisms in the human body. Treatments with anticancer agents, such as 5-Fluorouracil, Cisplatin, and Oxaliplatin, significantly change the temporal stability and environment of intestinal bacterial flora. The anticancer treatment chemotherapy often depresses the immune system and induces side effects, such as diarrhea. This study investigated the effects anticancer agents have on the intestinal microbial ecosystems of patients with gastric cancer. An exploration of the diversity and temporal stability of the dominant bacteria was undertaken using a DGGE with the 16S rDNA gene. Researchers collected stool samples from patients zero, two and eight weeks after the patients started chemotherapy. After the treatment with anticancer agents, the bacteria strains Sphingomonas paucimobilis, Lactobacillus gasseri, Parabacteroides distasonis and Enterobacter sp. increased. This study focused on the survival of the beneficial microorganisms Bifidobacterium and Lactobacillus in the intestines of cancer patients. The administration of antigastric cancer agents significantly decreased Lactobacillus and Bifidobacterium populations and only moderately affected the main bacterial groups in the patients' intestinal ecosystems. The results showed the versatility of a cultivation independent-PCR DGGE analysis regarding the visual monitoring of ecological diversity and anticancer agent-induced changes in patients' complex intestinal microbial ecosystems.

Evolutionary Study on the Dark Chub (Zocco temmincki) IX. Phylogeny of the Subfamily Danioninae (Pisces, Cyprinidae) (갈겨니(Zacco temmincki)의 진화에 관한 연구 IX. 피라미아과 어류의 계통진화)

  • 양서영;민미숙
    • The Korean Journal of Zoology
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    • v.32 no.4
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    • pp.393-403
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    • 1989
  • Using starch gel electrophoresis of proteins, we examined variation at 24 genetic loci in five species (three general of the Subfamily Danioninae (Class Pisces, Family Cyprinidae) inhabiting In Korea. The average degree of genic variation of the Subfamily Danioninae (A=1.8, P=16.5%, HD=0.043, HG=0.049) was far less than that of the fresh water fishes in general. But the degree of genic variation of A. chinensis (P=32.5 HD=0.100, HG=0.119) was highe, than other fishes and the value of O. biders was the lowest (P=4.2%, HD=0.008, HG=0.008). The average genetic similarities among the populations in each species of A. chinensis, Z. platypus, Z. temmincki MS type, Z. temmincki W type, and O. widens were S=0.902, 0.899, 0.990, 0.914, and 0.992, respectively. The average genetic similarity of A. chinensis to the other species was the lowest value of S=0.235, whereas that between two species of Z. temmincki was the highest of S=0.822. Genetically, Z. plypus is more similiar to O. widens than ho species of the same genus Zacco. Based on estimated divergent time of 5 species of the Subfamily Danioninae (7.6 to 0.9 million years) it is assumed that they are speciated during late Pliocene to middle Pleistocene epoch.

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