• Title/Summary/Keyword: 상동관계

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Isolation and Characterization of Inducible Genes from Bombyx mori Injected with E. coli by Differential Screening (누에에의 차별화 선별을 통한 면역 관련 유도 유전자의 분리와 특성)

  • 김상현;제연호
    • Journal of Sericultural and Entomological Science
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    • v.38 no.1
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    • pp.19-24
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    • 1996
  • To investigate the genes which is related to immune reaction of Bombyx mori, differential screening was carried out using naive and induced B. mori mRNA probe. To begin with, we constructed the cDNA library with mRNA isolated from fifth instar larvae injected with E. coli(4 X 106 cells/larva) using Uni ZAP XR vector kit. Thirty-two inducible cDNAs showing higher intensity on the induced mRNA probing membranes were selected. Partial nucleotide sequences of 29 clones were determined and their expessed sequence tags (ESTs) were produced. Nineteen ESTs in 29 ESTs were matched in GenBank database and the rest of them were found to be unknown. These unmatched ESTs were presumed to be novel genes. The nineteen ESTs contained variable genes related to biological process in Bombyx mori and four classes immune genes. Four clones, BmInc 6, 8, 18 and 27 were similar to two antibacterial peptide genes, hemolin gene and transferrin gene, respectively.

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Growing Environment Characteristics and Vegetational Structure of Sageretia thea, Medicinal Plant (약용식물 상동나무 자생지 생육환경 특성과 식생구조)

  • Son, Yonghwan;Son, Ho Jun;Park, Gwang Hun;Lee, Dong Hwan;Cho, Hyejung;Lee, Sun-Young;Kim, Hyun-Jun
    • Korean Journal of Plant Resources
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    • v.35 no.5
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    • pp.594-606
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    • 2022
  • This study was conducted to figure out the environment factors including vegetation structure and soil characteristics in natural habitats of Sageretia thea, and offers the basic information for habitats conservation and proliferation. The natural habitats of Sageretia thea were located at altitudes between 0~370 m with inclinations ranged as 3~35°. Through the vegetation research, the dominant species of tree layers were found to be divided into four communities. Cornus macrophylla (Com. I), Pinus thunbergii - Cinnamomum camphora (Com. II), Machilus thunbergii (Com. III), and Pinus thunbergii (Com. IV). The Species diversity (H') was 1.397~1.455, evenness (J') was 0.972~0.986, and dominance (D) was found to be 0.014~0.028. As a result of the physicochemical characteristics of soils, habitats soil mainly consisted of sandy soil and sandy loam soil. The average soil pH was 5.28~5.98, electronic conductivity was 0.22~63 ds/m, soil organic matter was 13.33~19.33 cmol+/kg, Exchange cations were appeared in the order of Ca2+, Mg2+, K+, and Na+. The Ordination result showed that Correlation coefficient between communities and environmental factors were significantly correlated with 4 main factors altitude, electronic conductivity, cation exchange capacity, exchangeable Na+. As expected, The result of this study will be helpful information on the preservation and mass production for use.

Face Detection And Recognition using Hidden Markov Models (HMM 을 이용한 얼굴 검출과 인식)

  • 박호석;차영석;최현수;배철수;권오홍;최철재;나상동
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2000.05a
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    • pp.336-341
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    • 2000
  • Hidden Markov Model(HMM)을 기반으로 한 얼굴 검출과 얼굴 인식에 대한 프레임작업에 대한 것이다. 관찰 벡터는 Karhunen-Loves Transform(KLT)의 상관관계를 이용하여 얻은 HMM의 정역학 특성을 사용하였으며, 본 연구에서 보여준 얼굴인식 방법은 이전의 HMM 기반의 얼굴인식 방법에서 인식률을 약간 개선함으로써 컴퓨터 연산을 훨씬 간단히 할 수 있음을 보여준다

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Temporal Color Correlograms for Video Retrieval (비디오 검색을 위한 시간 색상 상관관계그래프)

  • Park, Ho-Sik;Lee, Young-Sik;Kim, Jin-Han;Na, Sang-Dong;Bae, Cheol-Soo
    • Proceedings of the Korea Information Processing Society Conference
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    • 2003.05a
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    • pp.643-646
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    • 2003
  • 본 논문은 분할된 비디오 화면들의 색상 내용을 기반으로 하는 새로운 영상 검색 방법을 제안 하고자 한다. 제안된 시간 색상 상관그래프는 공통적인 통계 데이터를 이용하여 비디오 화면 내의 공간-시간 관계를 계산한다. 시간 색상 상관 그래프는 내용 기반의 영상 검색에 매우 효과적인 것으로 밝혀진 HSV(Hue, Saturation, Value) 색상 상관 그래프를 기반으로 하고 있다. 시간 색상 상관 그래프는 하나의 비디오 화면으로부터 추출된 프레임 샘플의 양자화 된 HSV 색상 값의 자기상관관계를 이용하여 구성하였다. 본 논문에서는 11시간 분량의 분할된 MPEG-1 비디오에 대한 질의와 질의에 대한 관련성 판정을 하고자 내용 기반의 멀티미디어 검색 시스템을 구축하여 실험하였다. 실험 견과 제안된 방법이 시각 정보만을 필요로 하는 검색에 있어 기존의 다른 검색 방법보다 우수한 결과를 나타냄을 증명하였다.

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A Study on the Precipitation Mechanism of Quartz Veins from Sangdong Deposit by Analyses of Vein Texture and Trace Element in Quartz (상동광산 석영맥의 조직 및 석영의 미량원소 분석을 통한 광맥 침전 기작 도출)

  • Youseong Lee;Changyun Park;Yeongkyoo Kim
    • Economic and Environmental Geology
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    • v.56 no.3
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    • pp.239-257
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    • 2023
  • Sangdong deposit, a W-Mo skarn deposit, is located in Taebaeksan mineralized district, hosting vertically developed scheelite-quartz veins that formed at the late ore-forming stage. In this study, we tried to examine the geochemical signatures of ore-forming fluids and vein-forming mechanisms by analyzing the micro-texture of quartz veins and trace element concentrations of quartz. As a result of texture analyses, quartz veins in the hanging wall orebody and the foot wall orebody commonly exhibit the blocky and the elongate blocky texture, respectively, whereas quartz veins in the main orebody show both textures. These textural differences indicate that quartz veins from the hanging wall orebody were precipitated by the primary hydrofracturing due to H2O saturation in the igneous body with relatively high temperature and pressure at a vein-skarn stage, and after that, repeated hydrofracturing caused the formation of quartz veins from the main orebody and foot wall orebody. The results of trace element concentrations show that Li++Al3+↔Si4+ is a main substitution mechanism. However, those of the foot wall orebody were clearly divided into a Li+-dominated substitution and a Na+-, K+-dominated substitution. Considering that quartz veins from the foot wall orebody commonly show the elongate blocky texture, such a distinction means that it is a result of repeated injections of fluid with the different composition. Ti concentrations of quartz from the hanging wall, main, and the foot wall orebody are 28.6, 8.2, and 15.7 ppm in average, respectively. Given a proportional relationship between the precipitation temperature and Ti concentrations, it seems that quartz veins from the hanging wall orebody were precipitated at the highest temperature. Al concentrations of the hanging wall, main, and the foot wall orebody having an inverse relationship with fluid pH are 162.3, 114.2, and 182.5 ppm in average, respectively. These results show that Al concentrations in vein-forming fluids were not changed dramatically. Moreover, these concentrations are extremely low in comparison with the other hydrothermal deposits. This indicates that quartz in overall ore veins at Sangdong deposit was precipitated from the constant condition with slightly acidic to near neutral pH.

Taxonomic Study of Korean Armillaria Species Based on Biological Characteristics and DNA Analyses (생물학적 특성과 DNA분석을 이용한 한국내 Armillaria속균의 분류)

  • Sung, Jae-Mo;Yang, Kun-Joo;Kim, Soo-Ho;Harrington, Tom
    • The Korean Journal of Mycology
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    • v.25 no.1 s.80
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    • pp.46-67
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    • 1997
  • From 1985 to 1993, we collected 20 isolates throughout Kangwon and obtained 6 isolates from other sources. A. mellea formed rhizomorph actively, and some of A. osroyae were poor in the formation of rhizomorph and some without formation of rhizomorph. A. tabescens was active in the growth of aerial mycelium and poor in the development of rhizomorph. In A. gallica, the mycelium development among the isolates were variable greatly, and especially in isolate A8(KNU-250), the mycelial development was similar to that of A. osroyae, but A8(KNU-250) showed the feature of A. gallica to change medium into brown color. In PCR-RFLP analysis of the IGS region in rDNA, the homology between each isolate in the A. mellea and A. ostoyae showed 100% homology. A. tabescens showed $0.919{\sim}0.974$ homology, and A. gallica showed $0.619{\sim}1.000$ homology. A19 and A12 showed 100% homology as the same group, but compared with other subgroups they showed less than 10% homology as $0.051{\sim}0.108$ value. In RAPD analyses, the isolates of A. mellea showed high homology among themselves as $0.983{\sim}1.000$, and A. ostoyae also showed high similarity. The homology between isolates of A. tabescens showed $0.594{\sim}0.953$ value because A. gallica showed $0.280{\sim}0.733$ value, and the variations between isolates were greater than other species. Especially, A19 and A22 were identified as new novel group which were remoted from other groups, and the homology between these two isolates showed 0.921 value, and the genetic similarity between these groups and other 4 groups showed less than 7% as $0.012{\sim}0.069$ value. Of 5 species identified in this study, 4 species were identified as A. mellea, A. ostoyae, A. tabescens, and A. gallica that were already reported ones and 1 species was suggested as a new specie in Korea.

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Pointwise Convergence for the FEM in Poisson Equations by a 1-Irregular Mesh (포아송 방정식에서 1-Irregular Mesh를 이용한 유한요소법의 수렴성에 관한 연구)

  • Lee, Hyoung;Ra, Sang-Dong
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.16 no.11
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    • pp.1194-1200
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    • 1991
  • The FEM is a computer-aided mathematical technique for obtaining approximate solution to the differential equations. The pointwise convergence defines the relationship between the mesh size and the tolerance. This will play an important role in improving quality of finite element approximate solution. In the paper. We evaluate the convergence on a certain unknown point with a 1-irregular mesh refinement and spectral order enrichment. This means that the degree of freedom is minimized within a tolerance.

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Phylogenetic relationships of genera Grifola on the basis of ITS region sequences (rDNA의 ITS 부위 염기서열 분석에 의한 잎새버섯(Grifola)속 균주의 유전적인 유연관계 분석)

  • Lee, Chan-Jung;Jhune, Chang-Sung;Cheong, Jong-Chun;Kong, Won-Sik;Suh, Jang-Sun
    • Journal of Mushroom
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    • v.10 no.2
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    • pp.93-99
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    • 2012
  • This study was carried to identify a correct species and asses genetic diversity within the same species of Grifola spp. preserved in Division of applied Microbiology. Contaminated isolates showed different growth rates, morphology and color of hyphae. We have reconstructed the phylogenetic tree of a select group of Grifola spp. using nucleotide sequences of the internal transcribed spacer region(ITS) region. The phylogenetic tree was constructed by using the neighbor-joining method. PELF primers of 20-mer were used to assess genetic diversity of preserved isolates. Sequence analysis showed that four strains were identified completely different nomenclature. According to the analysis of ITS sequences, the genus Grifola clustered into one group, most of which correlated with species-groups identified by RAPD method. Eight isolates included strain GM01 showed high similarity with Grifola frondosa. All isolates were collected in the Japan(GM01, GM02, GM03) was identified as Grifola frondosa and isolates of the China(GM05, GM06, GM08) was identified as Bjerkandera fumosa, Grifola frondosa and Dichomitus squalens, respectively. RAPD analysis of genetic polymorphisms of genus Grifola showed a very different band patterns on the isolat. As the result of RAPD and ITS region sequences analysis for preserved isolates, it seems likely that 4 isolates of Grifola spp. may be need to reclassify or eliminate from preserved catalogue.

Analysis of Genetic Relationship and Cultural Characteristics of Penicillium species Isolated from Postharvest Decay of Pear by Random Amplified Polymorphic DNA (저장 배에서 분리한 Penicillium속의 배양적 특성과 RAPD에 의한 유연관계 분석)

  • Kim, Ju-Hee;Lee, Wang-Hyu;Ryu, Young-Jin;Cheong, Seong-Soo;Choi, Joung-Sik
    • The Korean Journal of Mycology
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    • v.30 no.2
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    • pp.78-85
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    • 2002
  • Fifteen isolates from pear, and sixteen isolates from KCTC, KCCM, and Chungnam Univ. of Penicillium spp. were investigated for the analysis of their relationships of cultural characteristics and RAPD genetic variation by RAPD. The cultural characteristics of Penicillium spp. were shown different growth rate, morphology, and color. In addition, the cultural characteristics and RAPD analysis were conducted for the pear rot pathogens and related isolates. RAPD patterns were applied to compare the taxonomic and genetic diversity of the Penicillium species between 15 groups isolated from pear fruits and 16 standard species. The genomic DNA were amplified from $0.1{\sim}2.0kb$ by five URP primer and 744 bands were detected. The cluster analysis showed four genomic DNA RAPD groups and its similarity was 47.7%. Intraspecific relationships were 87.4, 97.5 and 95.2%, in P. expansum, P. solitum, and P. crustosum, respectively. These results appeared to be that there were high similarities between isolates, and consistent with the results of cultural morphological characteristics analysis.

Phylogenetic Analysis of Downy Mildew Caused by Peronospora destructor and a Method of Detection by PCR (양파 노균병균 Peronospora destructor의 분자계통학적 유연관계 분석과 PCR 검출기술 개발)

  • Back, Chang-Gi;Hwang, Sun-Kyung;Park, Mi jeong;Kwon, Young-Seok;Jung, Hee-Young;Park, Jong-Han
    • The Korean Journal of Mycology
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    • v.45 no.4
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    • pp.386-393
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    • 2017
  • Onion downy mildew, caused by Peronospora destructor, is a major disease in onion cultivation areas in Korea. The causal fungi were collected and analyzed based on sequence similarity and molecular phylogenetic relationships of multi-gene sequences, including the internal transcribed spacer (ITS) region. All isolates from Changnyeong-gun, Hamyang-gun, and Hapcheon-gun in Gyeongnam province, and Muan-gun, Haenam-gun, and Sinan-gun in Jeonnam province were identical in the four types of gene sequences, indicating they were genetically the same strains. In this study, a PCR method was developed based on the ITS gene sequences to amplify the specific DNA fragment for P. destructor only. The detection limit of was total genomic DNA of the P. destructor and the plant $0.7ng/{\mu}L$. Therefore, the developed PCR method could be used to detect P. destructor effectively from symptomless onion leaves.