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Genetic Diversity and Population Structure of Liriope platyphylla (Liliaceae) in Korea (한국내 맥문동의 유전적 다양성과 집단 구조)

  • Huh, Hong-Wook;Choi, Joo-Soo;Lee, Bok-Kyu;Huh, Man-Kyu
    • Journal of Life Science
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    • v.17 no.3 s.83
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    • pp.328-333
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    • 2007
  • Genetic diversity and population structure of eleven Liriope platyphylla (Liliaceae) populations in Korea were determined using genetic variation at 20 allozyme loci. The percent of polymorphic loci within the enzymes was 55.9%. Genetic diversity at the species level and at the population level was high(Hes = 0.178; Hep = 0.168, respectively), whereas the extent of the population divergence was relatively low ($G_{ST}$ = 0.064). $F_{IS}$, a measure of the deviation from random mating within the 11 populations, was 0.311. Total genetic diversity values ($H_T$) varied between 0.0 and 0.535, giving an average over all polymorphic loci of 0.323. The interlocus variation in within population genetic diversity ($H_S$) was high (0.305). An indirect estimate of the number of migrants per generation (Nm = 3.66) indicates that gene flow is high among Korean populations of the species. In addition, analysis of fixation indices revealed a substantial heterozygosity deficiency in some populations and at some loci. Mean genetic identity between populations was 0.988. It is highly probable that directional toward genetic uniformity in a relatively the homogenous habitat is thought to be operated among Korean populations of L. platyphylla.

Characterization of Acute Hepatitis Virus A Genotype in Korea (국내 급성 A형 간염 바이러스의 유전자형 특징)

  • Kim, Mi Hyun;Choi, Hayana;Pak, Kun Sik;Seong, Chi Nam;Cho, Hyun Wook
    • Journal of Life Science
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    • v.23 no.2
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    • pp.175-181
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    • 2013
  • In Korea, most hepatitis A virus is the IA genotype, but reports of other genotypes have increased recently. Therefore, the purpose of this study is to conduct a genotypic analysis of acute hepatitis A virus. From April 2010 to April 2011, clinical specimens from 20 patients hospitalized with acute hepatitis A and 36 sera positive for anti-HAV IgM were obtained, and the genotype of the VP1/P2A region was analyzed. RNA sequences of the VP1/P2A junction region were amplified using RT-PCR, and the sequences were compared. From 50 sequences amplified, 4 sequences (8%) belonged to genotype IA. The remaining 46 (92%) belonged to genotype IIIA. The results indicate that the genotype of the hepatitis A virus has changed from IA to IIIA in Korea.

Effect of Prandtl Number on Natural Convection in Tilted Square Enclosure with Inner Circular Cylinder (Prandtl 수 변화가 내부 원형 실린더가 존재하는 기울어진 정사각형 밀폐계 내부의 자연대류 현상에 미치는 영향)

  • Mun, Gi Su;Choi, Changyoung;Ha, Man Yeong;Yoon, Hyun Sik
    • Transactions of the Korean Society of Mechanical Engineers B
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    • v.38 no.11
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    • pp.935-942
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    • 2014
  • A numerical analysis of the effect of the Prandtl number on the natural convection in a cold outer tilted square enclosure with an inner hot circular cylinder is presented. Several Prandtl numbers (Pr=0.1, 0.7, 7) are considered, with different angles($0^{\circ}$, $15^{\circ}$, $30^{\circ}$, $45^{\circ}$) for the enclosure and Rayleigh numbers ($Ra=10^3$, $10^4$, $10^5$). The effect of the Prandtl number on the natural convection is analyzed using isotherms and streamline and surface-averaged Nusselt numbers. The flow and heat transfer characteristics are found to be dependent on the time for $Ra=10^5$ and Pr=0.1 at angles of $0^{\circ}$ and $45^{\circ}$. However, in the other cases, the flow and heat transfer characteristics are independent of the time.The surfaceaveraged Nusselt number increases with an increase in the Prandtl number. As the Prandtl number increases, the Nusselt number becomes larger regardless of the angle for $Ra=10^5$. In particular, the Nusselt number steeply increases when the angle is $45^{\circ}$ for $Ra=10^5$ and Pr=0.1.

Quantitative Ga-67 Scintigraphy in patients with Silicosis: Comparison with Chest X-ray and Pulmonary Function (규폐증에서 Gallium-67 신티그라피의 정량적인 분석: 흉부 X-선과 폐기능검사와의 비교)

  • Shin, Kwang-Hyun;Sohn, Hyung-Sun;Chung, Yong-An
    • The Korean Journal of Nuclear Medicine
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    • v.33 no.4
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    • pp.381-387
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    • 1999
  • Purpose: The International Labor Organization (ILO) has established an international standard for chest X-ray diagnosis of pneumoconiosis since 1980. However, there is a need for improved diagnosis and staging in occupational disease. We evaluated Ga-67 citrate scintigraphy quantitatively and correlated the scintigraphic findings with pulmonary function tests and chest X-ray results. Materials and Methods: Twenty-five patients underwent whole body scintigraphy with additional chest and abdomen images 48 hrs after intravenous injection of 185 MBq of Ga-67 citrate. Ten normal controls were also studied. Regions of interest (ROI) were drawn on the posterior image to measure counts from the liver and lungs (Lung/Liver Ratio). Results: L/L ratio according to the stages of chest X-ray classification were as follows; stage 0 (normal, n=10): $0.3948{\pm}0.0692$, stage 1 (n=10): $0.5763{\pm}0.1537$, stage 2 (n=11), $0.6849{\pm}0.1459$, stage 3 (n=4) $0.9913{\pm}0.0712$. There was a significant correlation between the scintigraphic L/L ratio and the X-ray stage (r=0.618, p<0.05). However, no significant correlation between L/L ratio and pulmonary function tests were observed (p>0.05). Conclusion: Quantitative Ga-67 scintigraphy can be a useful method for staging of silicosis. However, it is not a method to assess pulmonary functional impairment.

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Phonology and Morphometrics Change of Zostera marina L. Population at Duksan Port in the Eastern Coast of Korea (동해 덕산항에 생육하는 거머리말(Zostera marina L.) 개체군의 생물계절학과 형태 변이)

  • 이상룡;이성미;김정하;최청일
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.8 no.2
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    • pp.70-77
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    • 2003
  • From March 1998 to August 2000, the phenological and morphometric changes of Zostera marina L. were examined at the Duksan Port in the eastern coast of Korea. Morphometric characteristics, phenological stage, shoot density, biomass of Z. marina population and environmental parameters were also measured. Nutrient levels in water column varied over the season. Morphometric characteristics of vegetative shoot changed with season; shoot heights ranged from 54.2 cm (March) to 100.0 cm (October). Reproductive shoots appeared from mid-March to early September of which the height was ranged from 97.8 cm (March) to 213.0 cm (July). The flowering phase started at 12$^{\circ}C$ and the fruit development was resulted up to 21$^{\circ}C$. The seed maturing was developed at 22$^{\circ}C$-$25^{\circ}C$. Shoot density and biomass in permanent quadrate (0.25 m$^2$) were significantly different among seasons ranging from 38 to 136 shoots (mean 80.3$\pm$6.5) for shoot density, and 190 g dry wt m$^{-2}$ in October 1998 to 922 g dry wt m$^{-2}$ in June 1998 for biomass respectively. Relationships between shoot morphometrics and physico-chemical parameters were not significantly correlated. Seasonal changes in water temperature seemed responsible for the replacement of reproductive phases and the annual changes of shoot morphometrics in Z. marina populations.

Effects of Vertical Eddy Viscosity on the Velocity Profile - Cases of Given Vertical Eddy viscosity - (鉛直 過粘性係數가 流速의 鉛直構造에 미치는 影響 - 鉛直 過粘性係數가 주어진 境遇 -)

  • 이종찬;최병호
    • 한국해양학회지
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    • v.29 no.2
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    • pp.119-131
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    • 1994
  • Vertical structures of wind-driven and tidal currents in a rectangular shaped uniform-depth basin of homogeneous water have been investigated using a mode-splitted, multi-level grid-box, hydrodynamic numerical model. The model was verified using analytical solutions for various vertical eddy viscosity profiles such as: a constant eddy viscosity, a linearly decreasing or increasing variation with depth, a quadratic variation with depth and an exponential variation with depth. Particular attention has been paid on the effects of "near-surface wall layer" on vertical shear of velocity. In numerical calculations, the whole water depth was divided into 13 levels with an unequal grid spacing. the model satisfactorily reproduces the velocity profile, but in case the eddy viscosity decreases rapidly with depth as in quadratical or exponential variation with depth, the vertical gradient of velocity near the bottom became very steep, and analytical solutions and numerical results showed some discrepancy. The vertical structures of horizontal velocity vary with both the depth-averaged value of eddy viscosity and its profiles. the velocity near the sea surface and near the bottom responded sensitively to the eddy viscosity of wall layer. For wind-driven current, the strong velocity shear was generated near the sea surface as eddy viscosity near the surface became small. For tidal current, the velocity above the sea bottom layer was almost constant regardless of the profiles of vertical eddy viscosity, but velocity in the sea bottom layer showed strong shear as eddy viscosity became small.

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Salinity and Distribution of Zooplankton in the Estuarine System of Mankyong River and Dongjin River (만경 동진강 하구계의 동물플랑크톤의 분포와 염분)

  • 서해립;서호영
    • 한국해양학회지
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    • v.26 no.3
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    • pp.181-192
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    • 1991
  • Zooplankton were sampled horizontally with a standard net from the surface layer of the estuarine system of Mankyong River and Dongjin River in October, 1989, March, May, and July, 1990. Among dominant taxa of the zooplankton community, copepods were predominant in October, 1989 and March, 1990 and Noctiluca scintillans in May and July, 1990. Abundance of zooplankton showed considerable spatial and temporal fluctuations with a range of $12~9,256ind./m^3$ in wet weight. In the copepod community, Pseudodiaptomus inopinus and Paracalanus inducus were predominant in October, 1989: Acartia hudosonica and P. inducus in March, 1990; A. hudosonica and Centropages abdoinalis in May, 1990; A. pacifica, P. indicus and Tortanus spinicaudatus in July. 1990. In summer (July),there were large seasonal changes in salinity ($0.7~28.9\textperthousand$), due to monsoonal flooding, and associated changes in community structured of copepods. There were eight species of copepods in the mixo-mesohaline zone ($5.0~28.8\textperthousand$), namely Acartia pacifica, A. hudosonica, Centropages tenuiremis, C. abdominalis, Labidocera Euchaeta, Tortanus spinicaudatus, corycaeus affinis and Paracalanus indicus. On the other hand, Thermocouple hyalinus, Pseudodiaptomus inopinus and Sinocalanus tenellus occurred in the mixo-oligohaline zone ($0.5~5.0\textperthousand$), showing more tolerant of low salinity than any of the other species. In the mixoeuhaline zone ($>28.0\textperthousand$), Labidocera bipinnata, Oithona similes, Calanus sinicus, Acartia omorii and Tortanus forcipatus were founded.

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A Technical Guide to Operational Regional Ocean Forecasting Systems in the Korea Hydrographic and Oceanographic Agency (I): Continuous Operation Strategy, Downloading External Data, and Error Notification (국립해양조사원 해양예측시스템 소개 (I): 현업 운영 전략, 외부 해양·기상 자료 내려 받기 및 오류 알림 기능)

  • BYUN, DO-SEONG;SEO, GWANG-HO;PARK, SE-YOUNG;JEONG, KWANG-YEONG;LEE, JOO YOUNG;CHOI, WON-JIN;SHIN, JAE-AM;CHOI, BYOUNG-JU
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.22 no.3
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    • pp.103-117
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    • 2017
  • This note provides technical guide on three issues associated with establishing and automatically running regional ocean forecasting systems: (1) a strategy for continuous production of hourly-interval three-day ocean forecast data, (2) the daily download of ocean and atmospheric forecasting data (i.e., HYCOM and NOAA/NCEP GFS data), which are provided by outside institutions and used as initial condition, surface forcing, and boundary data for regional ocean models, and (3) error notifications to numerical model managers through the Short Message Service (SMS). Guidance on dealing with these three issues is illustrated via solutions implemented by the Korea Hydrographic and Oceanographic Agency, since in embarking on this project we found that this procedural information was not readily available elsewhere. This technical guide is based on our experiences and lessons learned during the process of establishing and operating regional ocean forecasting systems for the East Sea and the Yellow and East China Seas over the 5 year period of 2012-2016. The fundamental approach and techniques outlined in this guide are of use to anyone wanting to establish an automatic regional and coastal ocean forecasting system.

Establishment of Thermal Infrared Observation System on Ieodo Ocean Research Station for Time-series Sea Surface Temperature Extraction (시계열 해수면온도 산출을 위한 이어도 종합해양과학기지 열적외선 관측 시스템 구축)

  • KANG, KI-MOOK;KIM, DUK-JIN;HWANG, JI-HWAN;CHOI, CHANGHYUN;NAM, SUNGHYUN;KIM, SEONGJUNG;CHO, YANG-KI;BYUN, DO-SEONG;LEE, JOOYOUNG
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.22 no.3
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    • pp.57-68
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    • 2017
  • Continuous monitoring of spatial and temporal changes in key marine environmental parameters such as SST (sea surface temperature) near IORS (Ieodo Ocean Research Station) is demanded to investigate the ocean ecosystem, climate change, and sea-air interaction processes. In this study, we aimed to develop the system for continuously measuring SST using a TIR (thermal infrared) sensor mounted at the IORS. New SST algorithm is developed to provide SST of better quality that includes automatic atmospheric correction and emissivity calculation for different oceanic conditions. Then, the TIR-based SST products were validated against in-situ water temperature measurements during May 17-26, 2015 and July 15-18, 2015 at the IORS, yielding the accuracy of 0.72-0.85 R-square, and $0.37-0.90^{\circ}C$ RMSE. This TIR-based SST observing system can be installed easily at similar Ocean Research Stations such as Sinan Gageocho and Ongjin Socheongcho, which provide a vision to be utilized as calibration site for SST remotely sensed from satellites to be launched in future.

Control of Daily First Drainage Time by Irrigation Management with Drainage Level Sensor in Tomato Perlite Bag Culture (배액전극제어법에 의한 토마토 펄라이트 자루재배시 일중 첫 배액 제어)

  • Kim, Sung-Eun;Sim, Sang-Youn;Kim, Young-Shik
    • Horticultural Science & Technology
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    • v.28 no.3
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    • pp.409-414
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    • 2010
  • The first drainage time in a day was controlled for precise irrigation management with low consumption of nutrient solution in tomato perlite bag culture system by measuring water level of drained water in drainage catchment part. This method automatically adjusted the irrigation time under any condition of light, temperature and humidity, resulting in stable water content in substrates. However, it was difficult to keep the time consistent as they were set. It drained with the deviation of 20 min in the treatment in which the first drainage time was set at 10:00 and 50 min in the treatment set at 10:30. The first drainage time was not constant, but the drain occurred stably before noon in the treatment of which irrigation frequency was longer than 30 min. The drainage ratio was better balanced in all the treatments using drainage level sensors than the treatment using time clock for irrigation control. High water and fertilizer efficiencies were obtained. Although the growth, total yield and sugar content were not significantly different between the treatments, fruit weight was higher in the treatments using drainage level sensors than that using timer.