• Title/Summary/Keyword: 국립생물자원관

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A report of 37 unrecorded anaerobic bacterial species isolated from the Geum River in South Korea

  • Lee, Changsu;Kim, Joon Yong;Kim, Yeon Bee;Kim, Juseok;Ahn, Seung Woo;Song, Hye Seon;Roh, Seong Woon
    • Journal of Species Research
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    • v.9 no.2
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    • pp.105-116
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    • 2020
  • A total of 37 anaerobic bacteria strains within the classes Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Bacteroidia, Flavobacteriia, Bacilli, Clostridia, and Fusobacteriia were isolated from freshwater and sediment of the Geum River in Korea. The unreported species were related with Rhizobium and Oleomonas of the class Alphaproteobacteria; Acidovorax, Pseudogulbenkiania, and Aromatoleum of the class Betaproteobacteria; Tolumonas, Aeromonas, Cronobacter, Lonsdalea, and Phytobacter of the class Gammaproteobacteria; Bacteroides, Dysgonomonas, Macellibacteroides, and Parabacteroides of the class Bacteroidia; Flavobacterium of the class Flavobacteriia; Bacillus and Paenibacillus of the class Bacilli; Clostridium, Clostridioides, Paraclostridium, Romboutsia, Sporacetigenium, and Terrisporobacter of the class Clostridia; and Cetobacterium and Ilyobacter of the class Fusobacteriia. A total of 37 strains, with >98.7% 16S rRNA gene sequence similarity with validly published bacterial species, but not reported in Korea, were determined to be unrecorded anaerobic bacterial species in Korea.

Prunus glandulosa Thunb.(Rosaceae) and its distribution on the Korean Peninsula

  • Kim, Jung-Hyun;Kim, Sun-Yu;Hyun, Chang Woo;Park, Jeong-Mi;Kim, Jin-Seok
    • Journal of Species Research
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    • v.9 no.2
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    • pp.117-121
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    • 2020
  • Prunus glandulosa Thunb. [=Cerasus glandulosa (Thunb.) Sokolov] (Rosaceae) is native to the warmtemperate region of China (Anhui, Fujian, Guangdong, Guangxi, Guizhou, Hebei, Henan, Jiangsu, Shaanxi, Shandong, Sichuan, Yunnan, and Zhejiang Provinces). It is naturalized in the United States (i.e. Alabama, Michigan and North Carolina) and Canada (Ontario). This species, previously only recorded as introduced or cultivated plants on the Korean Peninsula, was confirmed to be naturally distributed in the southwestern coast islands(i.e. Geomun-do, Chuja-do and an uninhabited island in Shinan-gun of Jeollanam-do). Prunus glandulosa Thunb. is distinguished from a related taxon P. japonica var. nakaii (H. Lév.) Rehder by pedicel 8-12 (-16) mm long, linear stipules, glabrous style, and pink petals. The morphological characters and illustration of P. glandulosa Thunb. are provided with line drawings and photographs from the natural habitat. In addition, it is likely that a new habitat will be found by plant biodiversity investigations through the southwestern coast islands. Further research is needed to determine its population size, distribution, and threats, as well as identify appropriate locations for conservation collection of germplasm.

A report on 14 unrecorded bacterial species isolated from the Nakdong River, South Korea

  • Cho, Ja Young;Baek, Kiwoon;Kim, Eui-Jin;Han, Ji-Hye;Hwang, Seoni;Choi, Ahyoung
    • Journal of Species Research
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    • v.9 no.2
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    • pp.77-84
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    • 2020
  • As a part of the research project "Survey of freshwater organisms and specimen collection," freshwater samples were collected from the Nakdong River. Among the bacterial isolates, we selected strains that showed higher than 98.7% 16S rRNA gene sequence similarity with confirmed bacterial species previously unreported in South Korea. The 14 new records to South Korea were phylogenetically diverse and belonged to four phyla, six classes, 11 orders, and 14 genera. At the genus level, these species were found to be affiliated with Reyranella, Ferrovibrio, Brevundimonas, and Aquidulcibacter of the class Alphaproteobacteria; Pseudomonas, Cellvibrio, and Photobacterium of the class Gammaproteobacteria; Paenibacillus and Bacillus of the phylum Firmicutes; Chryseobacterium, Flavobacterium, Pedobacter of the phylum Bacteroidetes; and Actinomadura and Leifsonia of the phylum Actinobacteria. These species were further characterized by examining their Gram reaction, colony and cell morphologies, biochemical properties, and phylogenetic positions. The detailed descriptions of these 14 previously unreported species are provided.

Seven new species of two genera Scalarispongia and Smenospongia (Demospongiae: Dictyoceratida: Thorectidae) from Korea

  • Kim, Young A;Lee, Kyung Jin;Sim, Chung Ja
    • Journal of Species Research
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    • v.9 no.2
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    • pp.147-161
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    • 2020
  • Seven new species of two genera Scalarispongia and Smenospongia (Demospongiae: Dictyoceratida: Thorectidae) are described from Gageo Island and Jeju Island, Korea. Five new species of Scalarispongia are compared to nine reported species of the genus by the skeletal structure. Scalarispongia viridis n. sp. has regular ladder-like skeletal pattern arranged throughout the sponge body and has pseudo-tertiary fibres. Scalarispongia favus n. sp. is characterized by the honeycomb shape of the surface and is similar to Sc. flava in skeletal structure, but differs in sponge shape. Scalarispongia lenis n. sp. is similar to Sc. regularis in skeletal structure but has fibers that are smaller in size. Scalarispongia canus n. sp. has irregular skeletal structure in three dimensions and ladder-like which comes out of the surface and choanosome. Scalarispongia subjiensis n. sp. has pseudo-tertiary fibres and its regular ladder-like skeletal pattern occurs at the choanosome. Two new species of Smenospongia are distinguished from the other 19 reported species of the genus by the skeletal structure. Smenospongia aspera n. sp. is similar to Sm. coreana in sponge shape but new species has rarely secondary web and thin and thick bridged fibres at near surface. Smenospongia mureungensis n. sp. has very simple skeletal structure.

Description of 42 unrecorded bacterial species in Korea, belonging to the class Alphaproteobacteria

  • Liu, Qingmei;Kim, Seung-Bum;Yoon, Jung-Hoon;Joh, Kiseong;Seong, Chi-Nam;Jeon, Che-Ok;Kim, Wonyong;Kim, Myung Kyum;Im, Wan-Taek
    • Journal of Species Research
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    • v.8 no.4
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    • pp.351-364
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    • 2019
  • Here we describe indigenous prokaryotic species in Korea, a total of 42 bacterial strains affiliated to the class Alphaproteobacteria isolated from various environmental samples: fermented vinegar, sea water, beach sand, fresh water, salt flats, moss, algae, activated sludge, and soil. From the high 16S rRNA gene sequence similarity (>98.7%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to predefined bacterial species. There is no official report that these 42 species included in Alphaproteobacteria in Korea: 15 species of 6 genera in the order Rhodospirillales, 12 species of 10 genera in the order Rhizobiales, 10 species of 8 genera in the order Rhodobacterales, 4 species of 4 genera in the order Sphingomonadales and 1 species of 1 genus in the order Caulobacterales. Gram reaction, colony and cell morphology, basic biochemical characteristics, isolation source, and strain IDs are also described in the species description section.

Epiphragma crane flies(Diptera: Limoniidae) of Korea

  • Podenas, Sigitas;Podeniene, Virginija;Park, Sun-Jae;Seo, Hong-Yul;Kim, Tae-Woo;Kim, A-Young;Byun, Hye-Woo;Aukstikalniene, Rasa
    • Journal of Species Research
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    • v.8 no.4
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    • pp.407-420
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    • 2019
  • Short-palped crane flies belonging to the genus Epiphragma Osten Sacken, 1860 (Diptera: Limoniidae: Limnophilinae) have a worldwide distribution except the Afrotropics, with the highest diversity in Neotropics and Oriental Region. They are divided into four subgenera: Eupolyphragma Alexander, 1948, Epiphragma s. str., Lipophragma Alexander, 1978, and Parepiphragma Alexander, 1960. Diagnostic characters and wing photographs of all subgenera are given. Genus Epiphragma was previously unknown from the Korean Peninsula. Species Epiphragma (Epiphragma) gracilistylus Alexander, 1933 is newly recorded for North Korea, E. (E.) subfascipenne Alexander, 1920 is newly recorded for South and North Korea, and E. (E.) subinsigne Alexander, 1920 is newly recorded for South Korea. These species are taxonomically revised, and the taxonomic status of E. (E.) gracilistylus is discussed. We present an identification key and redescriptions and illustrations of both sexes from all species in Korea. Redescription of larva and pupa of E.(E.) subfascipenne is presented. Elevation range, period of activity, habitat information, general distribution, and a distribution map in Korean Peninsula is given for each species.

A report of 35 unreported bacterial species in Korea, belonging to the phylum Firmicutes

  • Baek, Min-gyung;Kim, Wonyong;Cha, Chang-Jun;Joh, Kiseong;Kim, Seung-Bum;Kim, Myung Kyum;Seong, Chi-Nam;Yi, Hana
    • Journal of Species Research
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    • v.8 no.4
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    • pp.337-350
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    • 2019
  • In an investigation of indigenous prokaryotic species in Korea, a total of 35 bacterial strains assigned to the phylum Firmicutes were isolated from diverse habitats including natural and artificial environments. Based on their high 16S rRNA gene sequence similarity (>98.7%) and formation of robust phylogenetic clades with species of validly published names, the isolates were identified as 35 species belonging to the orders Bacillales (the family Bacillaceae, Paenibacillaceae, Planococcaceae, and Staphylococcaceae) and Lactobacillales (Aerococcaceae, Enterococcaceae, Lactobacillaceae, Leuconostocaceae, and Streptococcaceae). Since these 35 species in Korean environments has not been reported in any official report, we identified them as unrecorded bacterial species and investigated them taxonomically. The newly found unrecorded species belong to 20 species in the order Bacillales and 15 species in the order Lactobacillales. The morphological, cultural, physiological, and biochemical properties of the isolates were examined and the descriptive information of the 35 previously unrecorded species is provided here.

Endemic and sub-endemic water beetles of Mongolia and their distribution ranges

  • Enkhnasan, Davaadorj;Boldgiv, Bazartseren
    • Journal of Species Research
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    • v.8 no.4
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    • pp.395-406
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    • 2019
  • The aim of this study was to compile a species list of endemic water beetles of Mongolia and determine their distribution patterns. A total of 1,179 individuals of endemic water beetles were collected from nine different sub-basins (123 sample points) throughout the country. Currently, 21 endemic and sub-endemic species have been recorded in Mongolia. Eight of these species were strictly endemic. The endemic and sub-endemic species were found only among four families: Dytiscidae (10 out 99 spp.), Gyrinidae (1 out 7 spp.), Helophoridae (5 out 16 spp.), and Hydraenidae (5 out 13 spp.). The rate of endemism was higher in Hydraenidae than other families (38.4%). Endemic beetle fauna was most similar between the Onon and Kherlen River Basins (80%). Helophorus parajacutus Angus, 1970 was common in five sub-basins, but Agabus kaszabi $Gu{\acute{e}}orguiev$, 1972, Gyrinus sugunurensis Nilsson, 2001 and Ochthebius mongolicus Janssens, 1967 were recorded from only one sub-basin. In terms of sub-endemic species, Mongolia was mostly similar to the fauna of Eastern Siberia, Russia (73.7%) than other neighboring regions. Due to Mongolia's vast territory and different natural zones, endemism was exceptionally low (12.4%), but these data provide baseline information of endemic and rare species for their further conservation.

Lectotypification of the names Scrophularia alata and S. kakudensis(Scrophulariaceae)

  • Jang, Hyun-Do;Ji, Seong-Jin;Noh, Tae-Kwon;Oh, Hyun-Kyung;Nam, Gi-Heum
    • Journal of Species Research
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    • v.10 no.2
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    • pp.164-167
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    • 2021
  • According to Article 9.3 of the International Code of Nomenclature for algae, fungi, and plants(Shenzhen Code), a lectotype may be selected as the nomenclatural type from the original material, if the name was published without a holotype. While reviewing the genus Scrophularia collected in Northeast Asia, we found that two species, S. alata A. Gray and S. kakudensis Franch., were still untypified. S. alata has three specimens considered as syntypes in two herbaria, Harvard University and the Smithsonian Institution. For S. kakudensis, two specimens considered as syntypes at the Muséum National d'Histoire Naturelle, Paris were classified as normal specimens, not type specimens. Therefore, two species of Scrophularia L. namely, S. alata A. Gray and S. kakudensis Franch., are lectotypified. The lectotypes are kept in the Harvard University and the Muséum National d'Histoire Naturelle, Paris, respectively. Furthermore, some nomenclatural issues related to these names are discussed, and the photographs of the selected lectotypes are provided.

Saussurea albifolia M. J. Nam & H. T. Im (Compositae), a new species from the Baekdudaegan Area, Korea

  • Sun, Eun-Mi;Yun, Seon A;Kim, Seung-Chul;Chung, Gyu-Young;Nam, Myoung-Ja;Im, Hyoung-Tak
    • Journal of Species Research
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    • v.10 no.2
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    • pp.159-163
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    • 2021
  • Saussurea albifolia, a new species, is reported from the Baekdudaegan Mountains. It has distinctive morphological characteristics that distinguish it from other congeneric species of Saussurea in Korea; radical leaves persist or withered till flowering, white tomentose leaf beneath, campanulate involucre with brown-cobwebby hairs, and dark purplish phyllaries with acuminate tips. Saussurea albifolia is a new, endemic species, narrowly restricted to the Korean Peninsula as a consequence of adaptation to alpine or subalpine environments of the Baekdudaegan Area. Among the Korean species of Saussurea, S. gracilis Maxim., S. insularis Kitam., and S. seoulensis Nakai are morphologically similar to S. albifolia by having leaves with white hairs beneath and persistent radical leaves during blooming period. It has been well understood that Saussurea is one of the highly diversified and adaptable groups in Asteraceae and also that the currently recognized species in Korea likely significant underestimates its diversity on the Korean Peninsula.