• The Korean Journal of Pesticide Science
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• v.16 no.4
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• pp.357-363
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• 2012

Ginseng (Panax ginseng C. A. Meyer) is an economically important crop in Korea. While the consumption of the crop is gradually increasing, the yield is decreasing due to the injury of continuous cultivation or infection of soil-borne fungal pathogens such as Cylindrocarpon destructans, Fusarium solani, Rhizoctonia solani and Sclerotinia nivalis. In order to find promising biocontrol agents, we have isolated 439 soil bacteria from ginseng cultivated soil and tested their antifungal activities against ginseng rot pathogens. Among them, 3 strains were finally selected and tested for the elucidation of their genetic and biochemical properties. They were identified as Bacillus amyloliquefaciens using phylogenetic analysis based on 16S rRNA gene sequences. Moreover, all selected strains showed positive reaction for PCR detection targeting biosynthetic gene sequences of iturin A and surfactin. The results provided promising evidences that the bacterial strains isolated from ginseng cultivated soil can be novel biocontrol agents for ginseng cultivaion.

• Proceedings of the Korea Water Resources Association Conference
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• 2007.05a
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• pp.291-295
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• 2007

강수진단모형을 이용하여 저수지 이수운영을 위한 실시간 유량예측기법을 개발하였다. 강수진단모형은 현재 기상청 현업에서 수행중인 강우수치예보를 기반으로 상세 지역의 지형 효과에 의한 강수를 예측하는 정량강수예측모형(QPM; Quantitative Precipitation Model)으로서 부경대학교 환경대기과학과에서 개발된 모형이다. QPM은 중규모 예측 모형으로부터 계산된 수평 바람, 고도, 기온, 강우 강도, 그리고 상대습도 등의 예측 자료를 이용하고, 소규모 상세지형 효과를 고려함으로써 중규모 예측 모형에서 생산된 강수량 예측 값을 상세 지역의 지형을 고려한 강수량 예측 값으로 재구성하여 결과적으로 3km 간격의 상세지역 강우산출과 지형에 따른 강수량의 분포 파악이 용이할 뿐만 아니라 계산 효율성을 개선된 모형이다. QPM 검증을 위하여 기상학적 평가와 수문학적 평가를 수행하였다. 호우 사례별 일강수량의 시공간 분포로 부터, QPM을 활용한 시스템에 의한 예측결과가 원시자료 RDAPS 보다 고해상도의 예측 및 지형효과의 반영도가 높았으며, AWS의 관측자료와 비교하여 보다 높은 예측성을 보여 주었다. 대상기간인 2006년 1월 1일부터 6월 20일까지 관측강우는 총 391.5mm 였으며 RQPM은 실적강우에 비하여 119.5mm 정도 과소산정하고 있으나 분위사상과정을 거치게 되면 351.7mm로서 실적강우에 불과 10.2% 못미치고 있다. 이는 고무적인 결과로 볼 수 있으며 현업에서의 활용성이 기대되는 수준이라 볼 수 있다. 강우-유출모의를 위한 QPM신뢰도를 높이기 위하여 분위사상법(Quantile Mapping)을 이용하여 QPM모의에 존재할 수 있는 계통오차에 대한 추가적인 보정을 수행하였다. 수문학적 평가를 위하여는 장기연속유출모형인 SSARR모형을 기반으로 개발된 RRFS(Rainfall-Runoff Forecast System)을 이용하여 2006년 1월${\sim}$9월까지의 용담댐 유입량에 대하여 모의예측결과와 관측유입량 비교를 통한 검증을 수행하였다. 위 기간중 예측유입량의 RMSE(Root Mean Squared Error), COE(Sutcliffe Coefficient of Efficiency), MAE(Mean Absolute Error), $R^2$값은 각각 7.50, 0.68, 2.59, 0.69 값을 보이고 있다. 본 연구에서는 QPM에 의한 예측성의 향상 및 구축된 시스템에 의한 일강수량의 장기예측 가능성을 확인하였고, 향후 시스템을 현업에 활용하기 위해서 생산된 예측자료의 보다 장기적인 검증을 통한 시스템의 안정화가 필요할 것으로 사료된다.

• Korean Journal of Microbiology
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• v.39 no.4
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• pp.272-276
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• 2003

Sapgyo Lake is an artificial freshwater reservoir which is located to the midwest of Korea and is the main water reservoir for industry and agriculture of the region. In this study we investigated environmental factors and the change of bacterial community with the influence of surrounding inflow water and the seasonal variation using the molecular ecological approach. Water samples were collected at front of the dike in May and August, 2001. Bacterial genomic DNAs were extracted directly and purified for the amplification of bacterial 16S rDNA. Clone libraries of the 16S rDNA were constructed using pGEM-T easy vector and RFLP analysis was performed to make a group as OTUs with 4 base recognizing enzymes (MspI and HaeIII). The estimated values of richness in August sample was higher than in May. Thirty-three of 153 clones in May and thirty-eight of 131 clones in August were sequenced from forward region of bacterial 16S rDNA for about 600~800 bp. Proteobacteria, Cytophaga, gram positive bacteria and Verrucomicrobia were observed both months. Especially, Planctomyces, cyanobacteria and chloroplast appeared in August when algal bloom occurred. On the whole investigation, Sapgyo lake showed a typical community structure of estuarine and was influenced by heterochthonous organic matters from the surrounding stream.

• Korean Journal of Microbiology
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• v.54 no.1
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• pp.24-30
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• 2018

Norovirus infection is a leading cause of nonbacterial gastroenteritis outbreaks. New variants of GII.4 have emerged approximately every 2~3 years and have caused norovirus gastroenteritis pandemics globally. In this study, analysis and molecular genetic characteristics of the norovirus gastroenteritis outbreaks 2,917 samples in Gyeonggi-Do from 2014 to 2015. As a result, 247 samples out of 2,917 samples are positive for norovirus. Norovirus molecular genetic characteristics of the GI 8 types (GI-1, 2, 3, 4, 5, 6, 12, 14), GII 10 types (GII - 2, 3, 4, 5, 6, 11, 12, 14, 16, 17). Genome sequences of isolated noroviruses were similar to those of new GII.17 Kawasaki 2014 variants with 96.6 identity, suggesting that these viruses were imported from overseas. 44% of virus incidence was originated from school meal service. Therefore, a continuous monitoring and school sanitation should be required for preventing a massive virus outbreak.

• Journal of Life Science
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• v.18 no.4
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• pp.482-487
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• 2008

In this study, we screened and identified the bacterial strain showing high alkaline pretense inhibitor activity from marine environment. Nine bacterial strains with alkaline pretense inhibitor activity were isolated from marine sediments. Among them, strain C12 had the highest alkaline pretense inhibitor activity and was selected for further taxonomical study. On the basis of morphological and physiological characteristics, strain C12 was identified as the genus Streptomyces. A phylogenetic analysis of the 165 rDNA showed that the isolated strain was actually a member of the genus Streptomyces, because the determined sequence exhibited a higher homology with Streptomyces thermocarboxydus. Morphological characteristics showed cylindrical spore chain and smooth spore surface by scanning electron microscope. Strain C12 was grown on all media except for ISP 9 agar. This strain could be grown in the medium containing up to 9% NaCl.

• Korean Journal of Plant Taxonomy
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• v.46 no.4
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• pp.405-412
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• 2016

We investigate the intraspecific morphological variations and geographical distributions from twelve populations (28 samples) of Orobanche coerulescens in Korea. Two main morphological types were detected, i.e., glabrous (G-type) and pilose (P-type), in the external morphology (stem, leaf, bract, calyx, and corolla). The G-type was found on Ulleung-do and Dok-do, and the P-type was observed on the coasts of South Korea, Jeju-do and Ulleung-do. The distinct difference in the morphological types and geographical distribution suggested the existence of two putative lineages with different distribution processes. O. coerulescens, distributed in very limited areas, was only identified as the G-type on Dok-do. Hence, conservation efforts should focus on protecting native habitats to conserve native species and the unique biogeographic significance of this species.

• Korean Journal of Ichthyology
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• v.33 no.2
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• pp.45-56
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• 2021

A male, presumed to be an intergeneric hybrid between Tanakia lanceolata and Rhodeus pseudosericeus, was collected in the Boryeong Daecheoncheon Stream flowing into the Yellow Sea in the Republic of Korea. Morphological and molecular phylogenetic analyses were performed to discriminate the definite origin of the estimated natural hybrid. As a result of the morphological analysis, the color of the dorsal and anal fin rays edges of the natural hybrid individual, the upper and lower body colors followed the morphological characteristics of T. lanceolata, and that blue longitudinal stripe in the center of the caudal peduncle, the incomplete lateral line, and the barbels absent followed the morphological characteristics of R. pseudosericeus. In addition, as a result of the cytochrome b (cytb) gene analysis of mitochondrial DNA (mtDNA), the natural hybrid showed a nucleotide sequence similarity of 99.82 to 100% with T. lanceolata, and the maternal species was identified as T. lanceolata. As a result of the recombination activating gene 1 (rag1) gene analysis of nuclear DNA (nDNA), the natural hybrid showed double peaks pattern reflecting both the single nucleotide polymorphism sites (38 bp) between T. lanceolata and R. pseudosericeus, and the paternal species was identified as R. pseudosericeus. Therefore, a natural hybrid estimated male of Acheilognathinae analyzed in this study was found to be an intergeneric hybrid between a female T. lanceolata and a male R. pseudosericeus.

• Journal of Nuclear Fuel Cycle and Waste Technology(JNFCWT)
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• v.17 no.1
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• pp.59-73
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• 2019

A decontamination technology for radioactive liquid wastes was newly developed and hypothetically applied to the liquid waste management system (LWMS) of the nuclear power plant (NPP) to evaluate its decontamination efficacy for the purpose of the fundamental reduction of spent resins. The basic principle of the developed technology is to convert major radionuclide ions in the liquid wastes into inorganic crystal minerals via chemical or biological techniques. In a laboratory batch experiment, the biological method selectively removed more than 80% of cesium within 24 hours, and the chemical method removed more than 95% of cesium. Other major nuclides (Co, Ni, Fe, Cr, Mn, Eu), which are commonly present in nuclear radioactive liquid wastes, were effectively scavenged by more than 99%. We have designed a module including the new technology that could be hypothetically installed between the reverse osmosis (R/O) package and the organic ion-exchange resin in the LWMS of the APR1400 reactor. From a technical evaluation for the virtual installation, we found that more than 90% of major radionuclides in the radioactive liquid wastes were selectively removed, resulting in a large volume reduction of spent resins. This means that if the new technology is commercialized in the future, it could possibly provide drastic cost reduction and significant extension of the life of resins in the management of spent resins, consequently leading to delay the saturation time of the Wolsong repository.

• Journal of fish pathology
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• v.20 no.2
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• pp.109-117
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• 2007

This study was performed to identity non hemolytic streptococcus from cultured flounder (Paralichthys olivaceus) with Streptococcosis in the Jeju island. The result of BIOLOGTM test was Streptococcus uberis that simility of 0.5 and 98% identified in MicroLogTM system (Release 4.05). Carbohydrate utility pattern was dextrin, N-acetyl-D-glucosamine, arbutin, maltose, maltotriose, D-cellobiose, D-fructose, D-mannose, α-D-glucose, D-mannitol, β-methyl D-glucoside, salicin, sucrose, D-trehalose, pruvatic acid methyl ester, mono-methyl succinate, glycerol. In addition hemolysis test for S. parauberis and were S. iniae hemolysis in BAP (Blood agar plate). Antibiotic test for S. parauberis were Ampicillin, Amoxicillin and Fluoroquinolone sensitivity. Mutiplex PCR assay were detected S. pauberis (718 bp), S. iniae (870 bp) L. garviae (1,100 bp). Dectected S. parauberis (718 bp) were result of 16S rRNA sequence identified with S. parauberis (Gene bank accession number X89967). All isolated S. parauberis that with bouned by one group. The result were S. pauberis that γ-hemolytic chain form cocci and negative reaction of catalase, Multiplex PCR assay were 718 bp amplicon size.

• Journal of Plant Biotechnology
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• v.43 no.2
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• pp.151-156
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• 2016

Medicinal plants resources are becoming important assets since their usages have been expanded to the development of functional foods for human health, natural cosmetics, and pharmaceutical industries. However, names are different from each country and their phylogenetic origins are not clear. These lead consumers to be confused. In particular, when they are morphologically similar and distributed as dried roots, it is extremely difficult to differentiate their origins even by specialists. Recently, molecular markers have been extensively applied to identify the origin of many crops. In this review, we tried to overview the current research achievements for the development of suitable 'origin identification' regarding to the differentiation of Angelica species. Furthermore, more advanced techniques including amplification genome based marker analyses are also discussed for their practical applications in the authentication of particular medicinal plant in Angelica species.