• The Korean Journal of Applied Statistics
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• v.34 no.6
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• pp.945-956
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• 2021

In this study, we considered the algorithm of Legendre and Legendre (2012), which derives canonical correspondence analysis from weighted principal component analysis. And, it was proved that the canonical correspondence analysis based on the weighted principal component analysis is exactly the same as Ter Braak's (1986) canonical correspondence analysis based on the Gaussian response model. Ter Braak (1986)'s canonical correspondence analysis derived from a Gaussian response curve that can explain the abundance of species in ecology well uses the basic assumption of the species packing model and then conducts generalized linear model and canonical correlation analysis. It is derived by way of binding. However, the algorithm of Legendre and Legendre (2012) is calculated in a method quite similar to Benzecri's correspondence analysis without such assumptions. Therefore, if canonical correspondence analysis based on weighted principal component analysis is used, it is possible to have some flexibility in using the results. In conclusion, this study shows that the two methods starting from different models have the same site scores, species scores, and species-environment correlations.