• 한국응용곤충학회지
• /
• 제23권4호
• /
• pp.203-208
• /
• 1984

잎담배 4품종 (NC2326, NC95, NC744, Havana)과 2종의 식물 (Nicotiana repanda Wild., Physalis floridana Rydb.)을 이용하여 감자 또는 잎담배에서 분리된 10가지의 감자바이러스 Y (PVY) 계통 판별을 시도하였다. 10가지의 PVY 계통들을 이 식물들에 접종했을 때 괴저, 엽맥녹대 또는 mottling, 무병징등을 나타내면서 서로 다른 기주반응을 보여 쉽게 구분할 수 있었다. 조사된 계통들 중에 PVY-VN, PVY-N, PVY-NSNR, PVY-Chile 및 PVY-Argentina 등은 잎담배 품종 NC2326에서 괴저병징을 나타냈으며 이외 계통들은 엽맥녹대 또는 mottling 병징을 나타냈다. NC95에서는 PVY-MSMR에 의해 괴저병징을 이 외 계통들에 의해서는 엽맥녹대 또는 mottling 병징을 나타냈다. Havana에서는 PVY-NSNR, PVY-MSNR, PVY-VB 등에 의해 nettling 병징을, PVY-Chile 및 PVY-Argentina에 의해 괴저병징을 나타냈으나 이 외의 계통들에 의해서는 병징이 나타나지 않았다. NC744에서는 PVY-MSNR, PVY-MSMR에 의해 mottling 병징을, PVY-Chi 및 PVY-Argentina에 의해 괴저병징을 나타냈으며 이 외의 계통들에 의해서는 병징을 나타내지 않았다. N. repanda에서는 PVY-Argentina에 의해 괴저 반응을, PVY-VN 및 PVY-C에 의해서는 병징을 나타내지 않았으며 이 외의 계통들에 의해서는 mottling 병징을 나타냈다.

• The Plant Pathology Journal
• /
• 제32권1호
• /
• pp.33-46
• /
• 2016

In this study, the full-length nucleotide sequences of four Iranian PVY isolates belonging to $PVY^N$ strain were determined. The genome of Iranian PVY isolates were 9,703-9,707 nucleotides long encoding all potyviral cistrons including P1, HC-Pro, P3, 6K1, CI, 6K2, VPg, NIa-Pro, NIb and CP with coding regions of 825, 1,395, 1,095, 156, 1,902, 156, 564, 732, 1,557 and 801 nucleotides in length, respectively. The length of pipo, embedded in the P3 cistron, was 231 nucleotides. Phylogenetic analysis showed that the Iranian isolates clustered with European recombinant NTN isolates in the N lineage. Recombination analysis demonstrated that Iranian $PVY^N$ isolates had a typical European $PVY^{NTN}$ genome having three recombinant junctions while $PVY^N$ and $PVY^O$ were identified as the parents. We used dN/dS methods to detect candidate amino acid positions for positive selection in viral proteins. The mean ${\omega}$ ratio differed among different genes. Using model M0, ${\omega}$ values were 0.267 (P1), 0.085 (HC-Pro), 0.153 (P3), 0.050 (CI), 0.078 (VPg), 0.087 (NIa-pro), 0.079 (NIb) and 0.165 (CP). The analysis showed different sites within P1, P3 and CP were under positive selection pressure, however, the sites varied among PVY populations. To the best of our knowledge, our analysis provides the first demonstration of population structure of $PVY^N$ strain in mid-Eurasia Iran using complete genome sequences and highlights the importance of recombination and selection pressure in the evolution of PVY.

• The Plant Pathology Journal
• /
• 제21권4호
• /
• pp.349-354
• /
• 2005

A virus isolate collected from infected paprika (Capsicum annuum var. grossum) was characterized as Potato virus Y (PVY) based on biological, serological, cytopathological, and molecular properties. In host range studies, the paprika isolate produced the mosaic symptom on some tobacco, tomato and pepper (Capsicum annuum). A new paprika isolate also infected potato cultivars which is different biological characteristic compared to the other popular potyvirus infecting paprika, Pepper mottle virus (PepMoV). Previously reported PVY strains, $PVY^o$ and $PVY^N$ did not infect pepper and typical PepMoV isolates did not infect potato. Distinctive inclusion patterns of the scroll, pinwheel, long laminated inclusions, and helper components in the cytoplasm of infected cells were also different to those observed by the typical PVY isolate infections. However, the paprika isolate reacted to the monoclonal antibody of $PVY^N$ strain with high absorbance readings. RT-PCR amplification, cloning, and sequencing of the 3' untranslated region and a part of coat protein gene also added additional evidence of the paprika isolate as the $PVY^N$-related isolate. Multiple alignments as well as cluster dendrograms of PVY-paprika isolate revealed close phylogenetic relationship to the $PVY^N$ subgroup. Altogether, these results suggest that a new PVY isolate infecting paprika contained distinct characteristics compared to the other previously described PVY strains with closer relationship to the $PVY^N$ strain.

• The Plant Pathology Journal
• /
• 제33권4호
• /
• pp.382-392
• /
• 2017

This study reports the findings of a distinct Potato virus Y (PVY) isolate found in Northeast China. One hundred and ten samples (leaves and tubers) were collected from potato plants showing mosaic symptoms around the city of Harbin in Heilongjiang province of China. The collected tubers were planted and let to grow in a greenhouse. New potato plants generated from these tubers showed similar symptoms, except for one plant. Subsequent serological analyses revealed PVY as the causing agent of the disease. A novel PVY isolate (referred to as HLJ-C-44 in this study) was isolated from this sample showing unique mild mosaic and crisped leaf margin symptoms. The complete genome of this isolate was analyzed and determined. The results showed that HLJ-C-44 is a typical PVY isolate. Phylogenetic analysis indicated that this isolate belongs to the N-Wi strain group of PVY recombinants ($PVY^{N-Wi}$) and also shared the highest overall sequence identity (nucleotide and amino acid) with other members of this strain group. However, recombination analysis of isolate HLJ-C-44 revealed a recombination pattern that differed from that of other $PVY^{N-Wi}$ isolates. Moreover, biological assays in four different potato cultivars and in Nicotiana tabacum also revealed a different phenotypic response than that of a typical $PVY^{N-Wi}$ isolate. This data, combined, suggest that HLJ-C-44 is a novel PVY recombinant with distinct biological properties.

• 식물병연구
• /
• 제19권2호
• /
• pp.90-94
• /
• 2013

하령 감자는 전분함량이 높고, 역병에 저항성이며 맛이 좋은 품종으로 2005년도에 신품종으로 등록되었다. 2010년 저장 중인 하령 씨감자에서 심한 표피의 괴저와 표면이 융기되고 원형의 괴저 병반이 생기는 괴경 괴저 증상이 발생하였다. 괴경 괴저 증상의 감자를 PVY 진단용 프라이머를 이용한 RT-PCR 분석 결과 모두 PVY가 검출되었다. 괴저증상 감자에서 검출된 $PVY^{Hkr}$ 외피단백질의 유전자 염기서열을 분석하였고 $PVY^{Kor}$, $PVY^N$, $PVY^{NTN}$, $PVY^O$, $PVY^C$ 계통과 상동성을 비교한 결과 $PVY^{Hkr}$은 2005년에 보고된 $PVY^{Kor}$와 2개의 염기를 제외하고 정확히 일치하였다. PVY 감염이 저장 중인 하령 품종에서 같은 병징을 일으키는지 확인하기 위해 5품종의 감자(하령, 수미, 대서, 대지, 추백)와 2종의 바이러스(PVY, PLRV)를 이용하여 생물검정을 실시하였다. 그 결과, 괴경 괴저 증상은 PVY에 감염된 저장 중인 하령 품종에서만 나타났다.

• 한국식물병리학회:학술대회논문집
• /
• 한국식물병리학회 1995년도 Proceedings of special lectures on Molecular Biological Approaches to Plant Disease National Agricultural Science and Technology Institute Suwon, Korea
• /
• pp.77-96
• /
• 1995

To obtain basic informations for the improvement of seed potato production in Korea, some etiological properties of potato virus Y(PVY) distributed in the major seed potato production area(Daekwanryeong) were characterized, and the nucleotide and amino acid sequences of the coat protein gene of the PVY strains isolated were analyzed. PVY strains in Daekwonryeong, an alpine area, were identified to be two strains, PVYo and PVYN by symptoms of indicator plants, and their distribution in potato fields was similar. Major symptom on potato varieties by PVY was grouped as either mosaic alone or mosaic accompanied with veinal necrosis in the lower leaves. The symptom occurrence of the two symptoms was similar with Irish Cobbler, but Superior showed a higher rate of mosaic symptom than the other. The PVY strain which was isolated from potato cv. Superior showing typical mosaic symptoms produced symptoms of PVY-O on the indicator plants of Chenopodium amaranticolor, Nicotiana tabacum cv. Xanthi nc and Physalis floridana, but no symptom o Capsicum annum cv. Ace. Moreover, results from the enzyme-linked immunosorbent assay with monoclonal and polyclonal antibodies showed that the isolated PVY reacts strongly with PYV-O antibodies but does not react specifically with PVY-T antibodies. The purified virus particles were flexious with a size of 730$\times$11nm. On the basis of the above characteristics, the strain was identified to be a PVY-O and named as of PVY-K strain. The flight of vector aphids was observed in late May, however, the first occurrence of infected plants was in mid June with the bait plants surrounded with PVY-infected potato plants and early July with the bait plants surrounded with PVY-free potato plants. PVY infection rates by counting symptoms on bait plants (White Burley) were 1.1% with the field surrounded with PVY-free potato plants and 13.7% the fields surrounded with PVY-infected potato plants, showing the effect of infection pressure. The propagated PVY-K strain on tobacco(N. sylvestris) was purified, and the RNA of the virus was extracted by the method of phenol extraction. The size of PVY-K RNA was measured to be 9, 500 nucleotides on agarose gel electrophoresis. The double-stranded cDNAs of PVY-K coat protein(CP) gene derived by the method of polymerase chain reaction were transformed into the competent cells of E. coli JM 109, and 2 clones(pYK6 and pYK17) among 11 clones were confirmed to contain the full-length cDNA. Purified plasmids from pYK17 were cut with Sph I and Xba I were deleted with exonuclease III and were used for sequencing analysis. The PVY-K CP gene was comprised of 801 nucleotides when counted from the clevage site of CAG(Gln)-GCA(Ala) to the stop codon of TGA and encoded 267 amino acids. The molecular weight of the encoded polypeptides was calculated to be 34, 630 daltons. The base composition of the CP gene was 33.3% of adenine, 25.2% of guanine, 20.1% of cytosine and 21.4% of uracil. The polypeptide encoded by PVY-K CP gene was comprised of 22 alanines, 20 threonines, 19 glutamic acids and 18 glycines in order. The homology of nucleotide sequence of PVY-K CP gene with those of PVY-O(Japan), PVY-T(Japan), PVY-TH(Japan), PVYN(the Netherlands), and PVYN(France) was represented as 97.3%, 88.9%, 89.3%, 89.6% and 98.5%, respectively. The amino acid sequence homology of the polypeptide encoded by PVY-K CP gene with those encoded by viruses was represented as 97.4%, 92.5%, 92.9%, 92.9%, and 98.5%, respectively.

• 한국연초학회지
• /
• 제31권2호
• /
• pp.69-74
• /
• 2009

감자바이러스 Y(PVY)는 국내 황색종 산지에서 잎담배의 생육, 수량 및 품질에 있어서 매우 심한 피해를 일으키는 병으로서 이를 방제하기 위해서는 PVY 저항성 품종의 육성이 시급히 요구된다. KF120은 msKF117과 KF0007-7를 교배하여 육성된 $F_1$ hybrid 품종이다. msKF117은 NC82와 N. Africana를 교배하여 육성하였고, KF0007-7은 KF117과 NC82를 교배하여 육성하였다. KF120의 농경적 특성과 병저항성을 평가하기 위하여 2006 ~ 2007년 동안 생산력 검정시험을 수행한 결과 KF120은 KF109에 비하여 생육특성 및 수량성이 양호하였으며 수확엽수는 2매 정도 많았고 개화기는 2일정도 늦었다. KF120의 건조엽 수량은 KF109에 비하여 5% 정도 증수 되었으며 화학성분 및 물리성은 대등한 수준이었다. KF120은 KF109에 비하여 세균성 마름병과 역병에 대해서는 유사한 저항성을 가지고 있었으며, PVY에 대해서는 높은 저항성을 보였다.

• 한국연초학회지
• /
• 제20권2호
• /
• pp.153-159
• /
• 1998

The vein necrotic strain of Potato Virus Y (PVY - VN) and black shank (Phyto-phthora parasitica var. nicotianae) are the two major diseases causing severe damages especially in burley tobacco (N. tabacum L.) area in Korea. A new tobacco variety, KB 111, resistant to PVY and black shank disease, was developed by Korea Ginseng & Tobacco Research Institute in 1997. It is a male sterile(MS) F$_1$ hybrid of the cross between MS TC 613 and KB 108. KB 111 was compared to Burley 21 on the agronomic characteristics and disease resistances in performance tests: It possessed upright growth habit and flowered two days later than Burley 21. It was resistant to both PVY and black shank and yielded about 3% more cured leaf than Burley 21, but other characteristics are very simiar to those of Burley 21. The chemical composition and physical properties of the cured leaf of KB 111 were as much acceptable as those of Burley 21 while it produced average yield of good quality leaf and appeared to resistant to PVY and black shank disease on regional farm test in 1998.

• The Plant Pathology Journal
• /
• 제18권3호
• /
• pp.130-137
• /
• 2002

Potato virus Y (PVY) is one of the most important viruses in many field crops in Korea. In this study, 31 PVY isolates were isolated from infected potato (Solanum tuberosum), tobacco (Nicotiana tabacum), pea (Pisum sativum), and weeds (Veronica persica, Lamium amplexicause and Capsella bursa-pastoris) showing different mosaic symptoms in Jeonbuk, Chungnam, Gangwon, and Gyeongbuk areas in Korea. The 640 nucleotide region containing the C-terminal portion of coat protein (CP) gene and 3'non-translated region (NTR) was amplified by reverse transcription-polymerase chain reaction (RT-PCR) using PVY-specific oligonucleotide primers. Sequence analyses of the amplified DNA fragments showed that the C-terminal portion of CP gene was not significantly different from that of previously reported PVY strains from potato (PVY-OK and -T) and tobacco (PVY-VN) in Korea. Homologies of the deduced CP amino acid sequences were 93.3-99.0% to corresponding regions of the other PVY strains including PV $Y^{N}$, PV $Y^{o}$ , PV $Y^{OK}$ , PV $Y^{T}$ , and PV $Y^{VN}$ . In contrast the sequences located at the 3'-NTR showed more diverse sequence homologies (76.4-99.7%). These results indicate that the C-terminal portion of the CP gene was relatively conserved while sequences at the 3'NTR were more diverse and variable over the host species and the regions where they were isolated.e isolated.

• 한국연초학회지
• /
• 제19권2호
• /
• pp.117-123
• /
• 1997

Viral coat protein (CP) encoding cDNA with artificial start and stop codons was synthesized by reverse-transcriptase polymerase chain reaction (RT-PCR) from the Korean isolate of potato virus Y-vein nectrosis strain (pVY-VN). To make PVY CP cDNA to untranslatable form, three stop codons were inserted near the start codon by "megaprimer-PCR" method. The untranslatable CP cDNA was subcloned to plant expression vector and transferred to N. tabacum cv. NC82 by Agrobacterium-mediated transformation. Highly resistant plants to PVY infection were screened, based on symptom development after mechanical virus inoculation. By genomic PCR and Southern blot analysis, one or more copies of the untranslatable CP gene were found in all transformants. From northern blot analysis, highly resistant transgenic lines had very low level of CP transcript but susceptible lines had high level, suggesting resistance to PVY infection should be related to RNA-mediated mechanism.mechanism.