• 제목/요약/키워드: $CO_2$ evolution rate constant

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Effects of Solvent Viscosity on Conformational Dynamics of Heme-pocket in Myoglobin and Hemoglobin

  • Kim, Seong-Heun;Lim, Man-Ho
    • Bulletin of the Korean Chemical Society
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    • 제27권11호
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    • pp.1825-1831
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    • 2006
  • The influence of solvent viscosity on conformational dynamics of the heme-pocket, a small vacant site near the binding site of myoglobin (Mb) and hemoglobin (Hb), and playing a functionally important role by serving as a station in ligand binding and escape, was studied by probing time-resolved vibrational spectra of CO photodissociated from MbCO and HbCO in $D_2O$, 75 wt% glycerol/$D_2O$, and trehalose at 283 K. Two absorption bands ($B_1$ and $B_2$) of the sample in viscous solvents, arising from CO in the heme pocket, are very similar to those in $D_2O$. Two bands in Mb and Hb under all three solvents exhibit very similar nonexponential spectral evolution ($B_1$ band; blue shifting and broadening, $B_2$ band; narrowing with a negligible shifting), suggesting that in the present experimental time window of 100 ps, the extents of the spectral shift and narrowing is much influenced neither by the viscosity of solvent nor by the quaternary contact of Hb. Spectral evolution can be described by a biexponential function with a fast universal time constant of 0.52 ps and a slow time constant ranging from 13 to 32 ps. For both proteins in all three solvents majority of spectral evolution occurs with the fast universal time constant. The magnitude of the slow rate in the spectral shift of B1 band decreases with increasing solvent viscosity, indicating that it is influenced by global conformational change which is retarded in viscous solvent, thereby serve as a reporter of global conformational change of heme proteins after deligation.

Effects of Soil Types on the Biodegradation of Crude Oil by Nocardia sp. H17-1

  • Yoon, Byung-Dae;Baek, Kyung-Hwa;Kim, Hee-Sik;Moon, Seong-Hoon;Lee, In-Sook;Oh, Hee-Mock
    • Journal of Microbiology and Biotechnology
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    • 제14권5호
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    • pp.901-905
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    • 2004
  • The degradation and mineralization of crude oil were investigated over 50-days in three soils, loamy sand, sand, and combusted loamy, which were artificially contaminated with crude oil (50 g $kg^{-1}$) and inoculated with Nocardia sp. H17-1. The degradation efficiency of total petroleum hydrocarbon (TPH) in sand was the highest at 76% among the three soils. The TPH degradation rate constants $(k_{TPH})$ in loamy sand, sand, and combusted loamy sand were 0.027 $d^{-1}$, 0.063 $d^{-1}$, and 0.016 $d^{-1}$, respectively. In contrast, the total amount of $CO_2$ evolved was the highest at 146.1 mmol in loamy sand. The $CO_2$ evolution rate constants (k_{CO2})$ in loamy sand, sand, and combusted loamy sand were 0.057 $d^{-1}$, 0.066 $d^{-1}$, and 0.037 $d^{-1}$, respectively. Therefore, it seems that the degradation of crude oil in soils can be proportional to the soil pore space and that mineralization can be accelerated with the increase of organic substance.

잣나무엽(葉)의 초기(初期) 분해과정(分解過程)에 있어서 무기태(無機態) 질소(窒素) 및 CO2 방출속도(放出速度)의 변화(變化) (Changes of Inorganic Nitrogen and CO2 Evolution Rate on the Decomposition Process of Korean White Pine Needles)

  • 이명종;한상섭;김정제
    • 한국산림과학회지
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    • 제69권1호
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    • pp.13-18
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    • 1985
  • 잣나무의 녹엽(綠葉), 낙엽(落葉), F층(層)의 엽(葉)과 떡갈 및 굴참나무의 녹엽(綠葉)을 각각 토양(土壤)에 혼합(混合)하여 53일간 $30^{\circ}C({\pm}1)$로 항온배양(恒温培養)하는 동안 토양중(土壤中)의 무기태(無機態) 질소(窒素) 및 $CO_2$ 방출속도(放出速度)의 변화(變化)를 측정(測定)하여 다음의 결과(結果)를 얻었다. 1) 배양초기(培養初期)에는 무기태(無機態) 질소(窒素)의 유기화(有機化)로 무기태(無機態) 질소량(窒素量)의 감소(減少)가 강(強)하게 일어났고, 시간(時間)의 경과(經過)에 따라 점차 증가(增加) 하였다. 2) 혼합(混合)한 엽중(葉中)의 유기태(有機態) 질소(窒素)의 유기화속도(有機化速度)는 잣나무의 엽중(葉中) 녹엽(綠葉)에서 가장 컸으나, 굴참 및 떡갈나무의 녹엽(綠葉)보다는 작았다. 3) $CO_2$ 방출속도(放出速度)의 크기는 굴참나무녹엽(綠葉), 떡갈나무녹엽(綠葉), 잣나무녹엽(綠葉), 잣나무 낙엽(落葉), F층(層)의 잣나무엽(葉)을 혼합(混合)한 토양(土壤)의 순(順)이었고, 시간의 경과(經過)에 따라 점차 감소했다. 4) 질산태(窒酸態) 질소량(窒素量)은 점차 증가(增加)하여 배양(培養) 53일 후에, 암모니아태(態應) 질소량(窒素量)을 상회(上迴)하였다.

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Mg-13.5wt%Ni 합금 수소화합물의 수소방출에 대한 부피법에 의한 열분석 (Volumetric Thermal Analysis of Hydrogen Desorption from Mg-13.5wt%Ni Hydride)

  • 한정섭;박경덕
    • 한국수소및신에너지학회논문집
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    • 제26권4호
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    • pp.308-317
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    • 2015
  • To investigate the effect of microstructure on the formation of the desorption peak, the volumetric thermal analysis technique (VTA) was applied to the Mg-13.5 wt% Ni hydride system. The sample made by the HCS (hydriding combustion synthesis) process had two kinds of Mg microstructures. Linear heating was started with various constant heating rates. Only one peak was appeared in the case of the small initial hydrogen wt% (0.83 wt%). Yet, two peaks were appeared with increasing initial hydrogen wt% (1.85 and 3.73 wt%) when only Mg was hydrogenated. The first peak was formed through the evolution of hydrogen from $MgH_2$, made by eutectic Mg. The second peak was formed through the evolution of hydrogen from $MgH_2$, made by primary Mg. Therefore, this result shows that the microstructure also has a considerable effect on forming the desorption peak. We have also derived the hydrogen desorption equations by VTA to get apparent activation energy when the rate-controlling step for the desorption of the hydrided system is the diffusion of hydrogen through the ${\alpha}$ phase and the chemical reaction ${\beta}{\rightarrow}{\alpha}$.

Effect of C/N Ratio on Composting Treatment of TNT-Contaminated Soil

  • In, Byung-Hoon;Park, Joon-Seok;NamKoong, Wan
    • 한국환경보건학회지
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    • 제32권6호
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    • pp.578-584
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    • 2006
  • This research was conducted to estimate the effect of C/N ratio control on composting of TNT (2,4,6 trinitrotoluene)-contaminated soil. Glucose or acetone was selected to control C/N ratio of the contaminated soil. The C/N ratios of the controlled experiment and no controlled one were 26.0 and 6.6, respectively. During 45days, the degradation efficiency (96.0 or 91.8%) of acetone or glucose C/N ratio controlled soil was higher than that (78.4%) of no C/N ratio controlled case. The first order degradation rate constant of glucose or acetone C/N ratio control was 0.0641 or 0.0820/day. This constant was over twice 0.0356/day of no C/N ratio control. The C/N ratio control with glucose or acetone also showed a rather high $CO_2$ evolution than that without C/N ratio control. It was proven that C/N ratio control for composting of TNT-contaminated soil improved the treatment efficiency.

사문암지대의 중금속 함유 낙엽의 분해에 관한 연구 I. Microcosm 실험 (Studies on the Decomposition of Leaf Litter Containing Heavy Metals in Andong Serpentine Area, Korea I. Microcosm Experiment)

  • 류새한;김정명;심재국
    • 환경생물
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    • 제27권4호
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    • pp.353-362
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    • 2009
  • This study attempted to compare the litter decomposition rate of Arundinella hirta and Miscanthus sinensis var. purpurascens which collected from serpentine soil acting potentially toxic concentration of heavy metals and non-serpentine soil by using the microcosm method for 192 days under constant humidity and $23^{\circ}C$. The contents of Ni, Fe, Mg and Cr in the serpentine and nonserpentine soil originated litter showed high differences between them. The litter samples from serpentine site have lower C/N than non-serpentine litter, but the soluble carbohydrate content was shown almost similar between two plant litter. The mass loss rates of leaf litter from serpentine area were slower than those from non-serpentine site. During the experimental period, the remained dry weight of A. hirta and M. sinensis var. purpurascens litter collected from serpentine site were 64.7%, 65.0% of initial dry weight and litter samples from non-serpentine site showed 54.2%, 50.7%, respectively. K and Na were leached rapidly at the initial decomposition periods, but Ca showed immobilization and other metal elements reserved at the decomposing litter for a long time. The decomposing A. hirta litter from non-serpentine soil showed higher values of $CO_2$ evolution, microbial biomass-C, and microbial biomass-N than those in serpentine soil originated litter acting nutrient stresses and exhibited rapid decay rate. The microbial biomass and microbial respiration of decaying litter were positively correlated with litter decomposition rate, and these relationships showed more rapid slope in non-serpentine soil originated litter than that in serpentine soil.