• Title/Summary/Keyword: $\beta$-N-acetylglucosaminidase

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The Degradation of Chitin with Food Grade Papain

  • Han, Beom-Ku;You, Tak;Moon, Jong-Kook;Kim, Sae-Bom;Jo, Do-Hyun
    • Journal of Applied Biological Chemistry
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    • v.43 no.4
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    • pp.246-249
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    • 2000
  • We investigated the production of chitin oligosaccharides using food grade papain. A solution of commercial food grade papain (FGP) was dialyzed for 12 h before measuring its chitinolytic activity. The effects of enzyme concentration, reaction temperature, and pH on the endochitinase and $\beta$-N-acetylglucosaminidase activities and the thermostability of these enzymes were investigated. In adddition, the reaction products were analyzed with gel filtration on a Bio-Gel P2. The endochitinase activity was twentyfold higher than that of $\beta$-N-acetylglucosaminidase. The optimal endochitinase activity was at pH 3.0, while the maximal $\beta$-N-acetylglucosaminidase activity was at pH 6.0. The reaction product consisted mainly of the dimer of N -acetylglucosamine, with a small amount of its trimer. Under the experimental conditions, $120{\mu}g$ of chitin oligomers were obtained with 1 mg of FGP protein after an incubation of 2 h.

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Propeties and Functions of $\betaN-Acetylglucosaminidase$ from Cabbage Whitebutterfly, Pieris rapae L. (배추흰나비 (Pieris rapae L. ) 의$\beta-N-Acetylglucosaminidase$의 특성과 기능)

  • 윤치영;한원동김학열
    • The Korean Journal of Zoology
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    • v.36 no.1
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    • pp.123-132
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    • 1993
  • 곤충의 탈피작용에서 일어나는 키틴 분해대사를 구명하기 위한 목적으로 배추흰나비 (Pieris rupae L.)에서 3종의 서N-acetylglucosaminldase(El, Ell, Elll)를 분리, 정제하였다. Polvacrylamide gel 상에서 이들 효소의 활성은 기질과 triphenvltetrazolium chloride와의 반응 결과 생기는 발색정도로 확인하였다. 각각의 분자량은 76,000, 55,000, 35,000 da, pl 값은 모두 5.8이었으며 후p$\beta$GlcNAc와 각p$\beta$GaINAc에 대해서 다같이 기질특이성을 나타내었다. 또한 El과 Elll는 탈피 시기와 일치하는 전용 말기에 최대 활성을 나타내었으며 Ell는 용화 직후에 최대 활성을 나타내었다.

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Purification and Characterization of $\beta$-N-Acetylglucosaminidase from Haemolymph of the Cabbage Butterfly, Pieris rapae. (배추흰나비의 혈림프내 $\beta$-N-Acetylglucosaminidase의 정제 및 특성)

  • 윤치영;김학열
    • The Korean Journal of Zoology
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    • v.30 no.2
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    • pp.167-176
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    • 1987
  • 배추흰나비의 전용기 혈림프에서 $\beta$-N-Acetylglucosaminidase를 DEAE-cellulose ion exchange 및 Sephadex G-200 column chromatography 법을 이용하여 정제하였다. 정제된 효소는 7% acrylamide gel 전기영동에서 단일 band를 나타내었으며, 당을 함유한 복합단백질이었다. 최적 pH는 5.0, 최적반응온도는 6$0^{\circ}C$이었으며, 각 온도에서 10분간 incubation한 열안정성에 있어서는 6$0^{\circ}C$까지 비교적 높은 활성을 나타내었지만 7$0^{\circ}C$ 이후에는 거의 활성을 나타내지 않았다. 또한 Hg$^2$+ 처리는 심한 효소활성의 저해 현상을 보였지만, Mn$^2$+, $Mg^2$+ 등은 활성의 증가를 나타내었으며, Km 값은 6.67$\times$10-$^3$M, pl 값은 5.8, 분자량은 4.1$\times$105 daltons 이었다.

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Molecular Cloning and Characterization of the Gene encoding $\beta$-N-acetylhlucosaminidases Homologue from Bombyx mandarina (멧누에(Bombyx mandarina)로부터 $\beta$-N-Acetyglunosamicidase를 코딩하는 cDNA의 분리 및 염기서열 결정)

  • 구태원;황재삼;성규병;윤은영;방혜선;권오유
    • Journal of Sericultural and Entomological Science
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    • v.41 no.3
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    • pp.147-153
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    • 1999
  • Chitinolytic enzymes such as ${\beta}$-N-acetylglucosaminidase are major hydrolases involved in insect molting. We have isolated, sequenced a CDNA encoding ${\beta}$-N-acetylglucosaminidase from the silkworm, Bombyx mandarina, and compared its sequence with genes encoding chitinolytic enyzmes from other sources. The insert DNA in the clone is 3,284 nucleotides long with an open reading frame of 1,788 nucleotides that encodes a protein of 596 amino acids with a molecular weight of 68.2 kDa. There is a 3’-untranslated region composed with 1.479 nucleotides and are several potential polyadenylation signals. The predicted amino acid sequence apparently contains a leader peptide of 23 amino acids. A search of the amino acids sequence databases for sequences similarities to other ${\beta}$-N-acetylglucosaminidases or ${\beta}$-N-acetylhexosaminidases. The highest similarity matched with the enzyme from B. mori, which has a sequence identity of 95%. On the other hand, the identity between the B. mandarina enzyme and those from M. sexta and human are 70% and 24%, respectively.

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Short-Hairpin RNA-Mediated Gene Expression Interference in Trichoplusia ni Cells

  • Kim, Na-Young;Baek, Jin-Young;Choi, Hong-Seok;Chung, In-Sik;Shin, Sung-Ho;Lee, Jung-Ihn;Choi, Jung-Yun;Yang, Jai-Myung
    • Journal of Microbiology and Biotechnology
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    • v.22 no.2
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    • pp.190-198
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    • 2012
  • RNA interference (RNAi) is rapidly becoming a valuable tool in biological studies, as it allows the selective and transient knockdown of protein expression. The short-interfering RNAs (siRNAs) transiently silence gene expression. By contrast, the expressed short-hairpin RNAs induce long-term, stable knockdown of their target gene. Trichoplusia ni (T. ni) cells are widely used for mammalian cell-derived glycoprotein expression using the baculovirus system. However, a suitable shRNA expression system has not been developed yet. We investigated the potency of shRNA-mediated gene expression inhibition using human and Drosophila U6 promoters in T. ni cells. Luciferase, EGFP, and ${\beta}$-N-acetylglucosaminidase (GlcNAcase) were employed as targets to investigate knockdown of specific genes in T. ni cells. Introduction of the shRNA expression vector under the control of human U6 or Drosophila U6 promoter into T. ni cells exhibited the reduced level of luciferase, EGFP, and ${\beta}$-N-acetylglucosaminidase compared with that of untransfected cells. The shRNA was expressed and processed to siRNA in our vector-transfected T. ni cells. GlcNAcase mRNA levels were down-regulated in T. ni cells transfected with shRNA vectors-targeted GlcNAcase as compared with the control vector-treated cells. It implied that our shRNA expression vectors using human and Drosophila U6 promoters were applied in T. ni cells for the specific gene knockdown.

Influences of Invasive Plant on Extracellular Enzyme Activities in Riparian Ecosystems (하변토양의 미생물체외효소활성에 미치는 칩입성 식물의 영향)

  • Park, Soon-Young;Kim, Jae-Keun;Kang, Ho-Jeong
    • Journal of Wetlands Research
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    • v.14 no.1
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    • pp.47-57
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    • 2012
  • We have measured soil enzyme activities, which represent the rates of organic matter decomposition, in four riparian ecosystems in Korea. ${\beta}$-glucosidase, N-acetylglucosaminidase, phosphatase and arylsulfatase activities were determined in five occasions over a year period in soils of control plots and plots with invasive plants, namely Sicyos angulatus and Humulus japonicus. Significantly higher enzyme activities were found in soils with invasive plant in barren land, but the difference was season and enzyme-specific. Although it was not universal changes, the invasive plants appeared to accelerate organic matter decomposition in some disturbed riparian ecosystems.

Sources and Variations of Extracellular Enzymes in a Wetland Soil (습지 토양에서 체외효소의 근원과 변화)

  • Freeman, Chris;Kang, Ho-Jeong
    • Korean Journal of Ecology and Environment
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    • v.35 no.4 s.100
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    • pp.326-330
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    • 2002
  • A wetland soil was sterilised by two methods and changes in microbial enzyme activities were assessed. The short-term effects were determined by toluene addition, while the longer-term effects of elimination was monitored by ${\gamma}$-radiation. The changes in ${\beta}$- glucosidase, ${\beta}$-xylosidase, cellobiohydrolase, phosphatase, arylsulphatase, and N-acetylglucosaminidase activities were determined by using methylumbelliferyl model substrates and comparing with the activities of control samples. Toluene addition induced different responses of enzymes. For example, phosphatase activity increased by the treatment while ${\beta}$-glucosidase and arylsulphatase activities decreased. In contrast, ${\gamma}$-radiation decreased all enzyme activities compared to control by 40-80%. The overall results of the toluene and ${\gamma}$-radiation experiments indicate that the large amounts of enzymes are stabilised outside of living cells, at least in the short term, but that the persistence of enzymes is maintained by de-novo synthesis of microbes.

Distribution of chitinases and characterization of two chitinolytic enzymes from one-year-old Korean Ginseng (Panax ginseng C.A. Meyer) roots

  • Moon, Jong-Kook;Han, Beom-Ku;Kim, T. Doo-Hun;Jo, Do-Hyun
    • BMB Reports
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    • v.43 no.11
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    • pp.726-731
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    • 2010
  • We report the tissue-specific distribution of chitinolytic activity in Korean ginseng root and characterize two 31-kDa chitinolytic enzymes. These two enzymes (SBF1 and SBF2) were purified 70- and 81-fold with yields of 0.75 and 1.25%, respectively, and exhibited optimal pH and temperature ranges of 5.0-5.5 and 40-$50^{\circ}C$. With [$^3H$]-chitin as a substrate, $K_m$ and $V_{max}$ values of SBF1 were 4.6 mM and 220 mmol/mg-protein/h, respectively, while those of SBF2 were 7.14 mM and 287 mmol/mg-protein/h. The purified enzymes showed markedly less activity with p-nitrophenyl-N-acetylglucosaminide and fluorescent 4-methylumbelliferyl glycosides of D-N-acetylglucosamine oligomers than with [$^3H$]-chitin. End-product inhibition of both enzymes demonstrated that both are endochitinases with different N-acetylglucosaminidase activity. Furthermore, the $NH_2$-terminal sequence of SBF1 showed a high degree of homology with other plant chitinases whereas the $NH_2$-terminal amino acid of SBF2 was blocked.

The Central Concept for Chitin Catabolic Cascade in Marine Bacterium, Vibrios

  • Jung, Byung-Ok;Roseman, Saul;Park, Jae-Kweon
    • Macromolecular Research
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    • v.16 no.1
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    • pp.1-5
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    • 2008
  • The enzymatic hydrolysis of chitin has been studied for almost a century, and early work established that at least two enzymes are required, a chitinase that mainly yields the disaccharide N,N'-diacetylchitobiose, or $(GlcNAc)_2$, and a "chitobiase", or ${\beta}$-N-acetylglucosaminidase, which gives the final product G1cNAc. This pathway has not been completely identified but has remained the central concept for the chitin catabolism through the $20^{th}$ century1 including in marine bacteria. However, the chitin catabolic cascade is quite complex, as described in this review. This report describes three biologically functional genes involved in the chitin catabolic cascade of Vibrios in an attempt to better understand the metabolic pathway of chitin.

Molecular Cloning and Characterization of the Gene Encoding Chitinase from Bombyx mandarina (멧누에(Bombyx mandarina)로부터 Chitinase를 코딩하는 cDNA의 분리 및 염기서열 결정)

  • 구태원;황재삼;성규병;윤은영;방혜선;권오유
    • Journal of Life Science
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    • v.9 no.4
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    • pp.341-347
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    • 1999
  • Insects use chitinolytic enzyme to digest chitin in the exoskelton during the molting process. We have isolated and sequenced a chitinase-encoding cDNA from the silkworm, Bombyx mandarina, compared its sequenced with genes encoding chitinolytic enzymes from other sources. The insert DNA in the clone is 2,675 nucleotides long with an open reading frame of 1,695 uncletides that encodes a protein of 565 amino acids with a molecuar weight of 63.4 kDa. The 3' -untranslated region of 889 nucleotides is AT-rich and contains two putative polyadenylation signals. The N-terminal sequence of the encoded protein contains numerous hydrophobic residues characteristic of a leader peptide. The amino acid alignment revealed that the endo-$\beta$-N-acetylglucosaminidase had 83% and 97% homology with M. sexta and B. mori, respectively. The deduced amino acid had two highly conserved region at the amino acid residues 97-111 and 139-148 that were related to the existing chitinase.

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