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A report of 45 unrecorded bacterial species isolated from Yeongsan River basin in Korea

  • Sanghwa Park (Bio-resources Bank Division, Using Technology Development Department, NNIBR) ;
  • Seok Won Jang (Protist Research Division, Microbial Resources Research Department, NNIBR) ;
  • Soo-Yeong Lee (Prokaryote Research Division, Biological Resources Research Department, NNIBR) ;
  • Ja Young Cho (Prokaryote Research Division, Biological Resources Research Department, NNIBR) ;
  • Jung Hye Eom (Prokaryote Research Division, Biological Resources Research Department, NNIBR) ;
  • Eui Jin Kim (Bio-resources Research Division, Using Technology Development Department, NNIBR)
  • Received : 2024.05.13
  • Accepted : 2024.09.02
  • Published : 2024.09.30

Abstract

The Yeongsan River is a prominent inland waterway, alongside the Han River, Nakdong River, and Geum River in South Korea. Numerous bacterial strains were isolated from the Yeongsan River basin for a comprehensive investigation into indigenous prokaryotic species conducted between 2020 and 2023. These bacterial strains were identified using 16S rRNA gene sequencing, wherein 45 bacterial strains shared >98.7% sequence similarities with bacterial species not recorded in Korea thus far. Therefore, this study aimed to catalogue aforementioned unrecorded species and characterize them contingent upon their Gram nature, colony and cell morphologies, biochemical properties, and phylogenetic positions. These bacterial species were determined to be phylogenetically diverse. They were categorized into nine classes, 18 orders, and 25 families. These previously unrecorded species were classified into the following genera and classes: Chitinophaga (class Chitinophagia); Flavobacterium (class Flavobacteriia); Rhodopseudomonas, Gemmobacter, Paracoccus, Azospirillum, Sphingomonas, Novosphingobium, Sphingorhabdus, and Erythrobacter (class Alphaproteobacteria); Bordetella, Pararobbsia, Polynucleobacter, Rhodoferax, Aquabacterium, Malikia, Comamonas, Ideonella, Paucibacter, Undibacterium, Cupriavidus, and Thauera (class Betaproteobacteria); Pectobacterium, Arenimonas, Lysobacter, and Luteimonas (class Gammaproteobacteria); Luteolibacter (class Verrucomicrobiia); Mycolicibacterium, Angustibacter, Ornithinibacter, Janibacter, Schumannella, Aurantimicrobium, Luedemannella, Nocardioides, and Propionicimonas (class Actinomycetes); Geothrix(class Holophagae); and Lactococcus (class Bacilli).

Keywords

Acknowledgement

This study was financed by an aid from the Nakdonggang National Institute of Biological Resources(NNIBR 20241108/ NNIBR 20241103) funded by the Ministry of Environment of the Republic of Korea and a grant [Project No. 2021003420001] approved by the Korea Environment Industry & Technology Institute, Republic of Korea.

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