Acknowledgement
본 연구는 식품의약품안전처 연구용역개발사업(과제번호: 22192식품위021)의 지원으로 이루어졌으며, 이에 감사드립니다.
References
- Letchumanan, V., Chan, K.G., Lee, L.H., Vibrio parahaemolyticus: a review on the pathogenesis, prevalence, and advance molecular identification techniques. Front. Microbiol., 5, 705 (2014).
- Drake, S.L., DePaola, A., Jaykus, L.A., An overview of Vibrio vulnificus and Vibrio parahaemolyticus. J. Compr. Rev. Food Sci., 6, 120-144 (2007). https://doi.org/10.1111/j.1541-4337.2007.00022.x
- Ministry of Food and Drug Safety (MFDS), (2022, October 14). Food poisoning statistics. Retrieved from http://www.foodsafetykorea.go.kr/portal/healthyfoodlife/foodPoisoningStat.do?menu_no=4425&meun_grp=MENU_NEW02.
- Ministry of Food and Drug Safety (MFDS), 2023. Food and Rural Affairs investigated the antimicrobial resistance of bacteria recovered from food animals, their meat and fishery products, and companion animals in the Republic of Korea in 2022, Cheongju, Korea, pp. 8-17.
- Park, K., Mok, J.S., Kwon, J.Y., Ryu, A.R., Kim, S.H., Lee, H.J., Food-borne outbreaks, distributions, virulence, and antibiotic resistance profiles of Vibrio parahaemolyticus in Korea from 2003 to 2016: a review. Fish. Aquat. Sci., 21, 3 (2018).
- Reygaert, W.C., An overview of the antimicrobial resistance mechanisms of bacteria. AIMS microbiol., 4, 482-501 (2018). https://doi.org/10.3934/microbiol.2018.3.482
- Jian, Z., Zeng, L., Xu, T., Sun, S., Yan, S., Yang, L., Huang, Y., Jia, J., Dou, T., Antibiotic resistance genes in bacteria: Occurrence, spread, and control. J. basic microbiol., 61, 1049-1070 (2021). https://doi.org/10.1002/jobm.202100201
- Ghenem, L., Elhadi, N., Alzahrani, F., Nishibuchi, M., Vibrio Parahaemolyticus: A Review on Distribution, Pathogenesis, Virulence Determinants and Epidemiology. Saudi J. Med. Med. Sci., 5, 93-103 (2017). https://doi.org/10.4103/sjmms.sjmms_30_17
- Raghunath, P., Roles of thermostable direct hemolysin (TDH) and TDH-related hemolysin (TRH) in Vibrio parahaemolyticus. Front. Microbiol., 5, 805 (2014).
- Miller, K.A., Tomberlin, K.F., Dziejman, M., Vibrio variations on a type three theme. Curr. Opin. Microbiol., 47, 66-73 (2019). https://doi.org/10.1016/j.mib.2018.12.001
- Dashti, A.A., Jadaon, M.M., Abdulsamad, A.M., Dashti, H.M., Heat treatment of bacteria: a simple method of DNA extraction for molecular techniques. Kuwait Med. J., 41, 117-122 (2009).
- Ministry of Food and Drug Safety (MFDS), 2022. Detection method for foodborne pathogens investigation. Cheongju, Korea, pp. 67-72.
- Clinical and Laboratory Standard Institute (CLSI), 2018. Methods for antimicrobial dilution and disk susceptibility testing of infrequently isolated or fastidious bacteria. Wayne, PA, USA, pp. 56-58.
- Bolger, A.M., Lohse, M., Usadel, B., Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics, 30, 2114-2120 (2014). https://doi.org/10.1093/bioinformatics/btu170
- Bankevich, A., Nurk, S., Antipov, D., Gurevich, A. A., Dvorkin, M., Kulikov, A. S., Lesin, V. M., Nikolenko, S. I., Pham, S., Prjibelski, A. D., Pyshkin, A. V., Sirotkin, A. V., Vyahhi, N., Tesler, G., Alekseyev, M. A., Pevzner, P. A., SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J. Comput. Biol., 19, 455-477 (2012). https://doi.org/10.1089/cmb.2012.0021
- Modi, A., Vai, S., Caramelli, D., Lari, M., The Illumina sequencing protocol and the NovaSeq 6000 System. Methods Mol. Biol., 2242, 15-42 (2021). https://doi.org/10.1007/978-1-0716-1099-2_2
- Feldgarden, M., Brover, V., Gonzalez-Escalona, N., Frye, J. G., Haendiges, J., Haft, D. H., Hoffmann, M., Pettengill, J. B., Prasad, A. B., Tillman, G. E., Tyson, G. H., Klimke, W., AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence. Sci. Rep., 11, 12728 (2021).
- Chen, L., Yang, J., Yu, J., Yao, Z., Sun, L., Shen, Y., Jin, Q., VFDB: a reference database for bacterial virulence factors. Nucleic Acids Res., 33, D325-328 (2005).
- Jolley, K.A., Bray, J.E., Maiden, M. C.J., Open-access bacterial population genomics: BIGSdb software, the PubMLST.org website and their applications. Wellcome Open Res., 3, 124 (2018).
- Park, K., Mok, J.S., Kwon, J.Y., Ryu, A.R., Shim, K.B., Seasonal and spatial variation of pathogenic Vibrio species isolated from seawater and shellfish off the Gyeongnam coast of Korea in 2013-2016. Korean Journal of Fisheries and Aquatic Sciences. 52, 27-34 (2019).
- Jeong, H.J., Lee, M.G., Lee, H.H., Seo, S.E., Jeong, S.H., Cho, B.S., Seo, J.M., Distribution of toxin genes and antimicrobial resistance of Vibrio parahaemolyticus isolated from seafood in Gwangju. J. Food Hyg. Saf., 37, 63-68 (2022). https://doi.org/10.13103/JFHS.2022.37.2.63
- Hu, Y., Li, F., Zheng, Y., Jiao, X., Guo, L., Isolation, molecular characterization and antibiotic susceptibility pattern of Vibrio parahaemolyticus from aquatic products in the Southern Fujian coast, China. J. microbiol. biotechnol., 30, 856-867 (2020). https://doi.org/10.4014/jmb.2001.01005
- Tran, T.H.T., Yanagawa, H., Nguyen, K.T., Hara-Kudo, Y., Taniguchi, T., Hayashidani, H., Prevalence of Vibrio parahaemolyticus in seafood and water environment in the Mekong Delta, Vietnam. J. Vet. Med. Sci., 80, 1737-1742 (2018). https://doi.org/10.1292/jvms.18-0241
- Ryu, A., Park, K., Kim, S.H., Ham, I.T., Kwon, J.Y., Kim, J.H., Yu, H.S., Lee, H.J., Mok, J.S., Antimicrobial resistance patterns of Escherichia coli and Vibrio parahaemolyticus isolated from shellfish from the West coast of Korea. Korean J. Fish. Aquat. Sci., 50, 662-668 (2017).
- Yu, H., Oh, E.G., Shin, S.B., Park, Y.S., Lee, H.J., Kim, J.H., Song, K.C., Distribution and antimicrobial resistance of Vibrio parahaemolyticus isolated from Korean shellfish. Korean J. Fish. Aquat. Sci., 47, 508-515 (2014)
- Kim,S.H., Sin, Y.M., Lee, M.J. Shin, P.K., Kim, M.G., Cho, J.S., Lee, C.H., Lee, Y.J., Chae, K.R., Isolation of major foodborne pathogenic bacteria from ready-to-eat seafoods and its reduction strategy. J. Life Sci., 15, 941-947 (2005). https://doi.org/10.5352/JLS.2005.15.6.941
- Mok, J.S., Cho, S.R., Park, Y.J., Jo, M.R., Ha, K.S., Kim, P.H., Kim, M.J., Distribution and antimicrobial resistance of Vibrio parahaemolyticus isolated from fish and shrimp aquaculture farms along the Korean coast. Mar. Pollut. Bull., 171, 112785 (2021).
- Huang, Y., Lyu, B., Zhang, X., Tian, Y., Lin, C., Shen, L., Yan, H., Zhang, D., Jia, L., Qu, M., Wang, Q., Vibrio parahaemolyticus O10:K4: an emergent serotype with pandemic virulence traits as predominant clone detected by whole genome sequence analysis - Beijing Municipality. China, 2021. China CDC Wkly., 4, 471-477 (2022).
- Stasiak, M., Mackiw, E., Kowalska, J., Kucharek, K., Postupolski, J., Silent genes: antimicrobial resistance and antibiotic production. Pol. J. Microbiol., 70, 421-429 (2021). https://doi.org/10.33073/pjm-2021-040
- Zhang, F., Zhang, J., Lin, G., Chen, X., Huang, H., Xu, C., Chi, H., Antibiotic resistance and genetic profiles of Vibrio parahaemolyticus isolated from farmed pacific white shrimp (Litopenaeus vannamei) in Ningde regions. Microorganisms, 12 (2024).
- Changsen, C., Likhitrattanapisal, S., Lunha, K., Chumpol, W., Jiemsup, S., Prachumwat, A., Kongkasuriyachai, D., Ingsriswang, S., Chaturongakul, S., Lamalee, A., Yongkiettrakul, S., Buates, S., Incidence, genetic diversity, and antimicrobial resistance profiles of Vibrio parahaemolyticus in seafood in Bangkok and eastern Thailand. PeerJ, 11, e15283 (2023).
- Jeong, H.W., Kim, J.A., Jeon, S.J., Choi, S.S., Kim, M.K., Yi, H.J., Cho, S.J., Kim, I.Y., Chon, J.W., Kim, D.H., Bae, D., Kim, H., Seo, K.H., Prevalence, antibiotic-resistance, and virulence characteristics Vibrio parahaemolyticus in restaurant fish tanks in Seoul, South Korea. Foodborne pathog. dis., 17, 209-214 (2020). https://doi.org/10.1089/fpd.2019.2691