Acknowledgement
This work was supported by a research grant from Halla University in 2023.
References
- B, Yogeswari, R. Kanakaraju, S. Boopathi, P. Kolandaivel, "Combined theorentical studies on solvation and hydrogen bond interactions in glycine tripeptide", Mol. Simul, Vol. 40, pp. 942-958, 2013. https://doi.org/10.1080/08927022.2013.828837
- M. Yuguang, S. Daniil and S. Gerhard, "Conformational dynamics of trialanine in Water. 2. Comparison of AMBER, CHARMM, GROMOS, and OPLS force fields to NMR and infrared experiments", J. Phys. Chem. B, Vol. 107(21), pp. 5064-5073, 2003. https://doi.org/10.1021/jp022445a
- F. Eker, X. Cao, L. Nafie & R. Schweitzer-Stenner, "Tripeptides Adopt Stable Structures in Water. A Combined Polarized Visible Raman, FTIR, and VCD Spectroscopy Study", J. Am. Chem. Soc., Vol. 124, pp. 14330-14341, 2002. https://doi.org/10.1021/ja027381w
- F. Eker, X. K. Griebenow & R. Schweitzer-Stenner, "Stable Conformation of Tripeptides in Aqueous Solution Studied by UV Circular Dichroism Spectroscopy", J. Am. Chem. Soc., Vol. 125, pp. 8178-8185, 2003. https://doi.org/10.1021/ja034625j
- Z. Shi, C. A. Olson, G. D. Zose, R. L. Baldwin, N. R. Kallenbach, "Polyproline II structure in a sequence of seven alanine residues" PNAS, Vol. 99, pp. 9190-9195, 2002. https://doi.org/10.1073/pnas.112193999
- M. Kobayashi, J. H. Sim, and H. Sato, "Conformational analyses for alanine oligomer during chain propagation by quantum chemical calculation" Polymer J., Vol. 47, pp. 369-378, 2015. https://doi.org/10.1038/pj.2015.8
- J. Rigaudy, S. P. Klesney, Nomenclature of Organic Chemistry: Section E, 483 (Oxford Pergamon Press, 1979.
- J. Graf, P. H. Nguyen, G. Stock and H. Schwalbe, "Structure and dynamics of the homologous series of alanine peptides: A joint molecular dynamics/NMR study", J. Am. Chem. Soc., Vol. 129,pp. 1179-1189, 2007. https://doi.org/10.1021/ja0660406
- M. J. Frisch, et al., Gaussian 03 User's Reference, Manual version, Gaussian Inc., Carnegie, PA,15106 USA, 2003.
- R. Ludwig, "Water from cluster to the bulk" Angew. Chem. Int. Ed., Vol. 40(10), pp. 1808-1827, 2001. https://doi.org/10.1002/1521-3773(20010518)40:10<1808::AID-ANIE1808>3.0.CO;2-1
- T. R. Dyke, K. M. Mack and J. S. Muenter, "The structure of water dimer from molecular beam electric resonance spectroscopy" J. Chem. Phys., Vol. 66, pp. 498-510, 1977. https://doi.org/10.1063/1.433969
- J. A. Odutola, T. R. Dyke, "Partially deuterated water dimers: Microwave spectra and structure". J. Chem. Phys., Vol. 72, pp. 5062-5070, 1980. https://doi.org/10.1063/1.439795
- M. Kobayashi, J. H. Sim, "Comparison of Structural Types of L-Alanine Pentamer by QCC", Apply. Chem. Eng., Vol. 33(4), pp. 425-430, 2022.