과제정보
This work was supported by the National Research Foundation (NRF) of Korea (2016M3A9B6945931) from Ministry of Science and ICT, Republic of Korea.
참고문헌
- Andreu, Z., Rivas, E., Sanguino-Pascual, A., Lamana, A., Marazuela, M., Gonzalez-Alvaro, I., Sanchez-Madrid, F., de la Fuente, H., and Yanez-Mo, M. (2016). Comparative analysis of EV isolation procedures for miRNAs detection in serum samples. J. Extracell. Vesicles 5, 31655. https://doi.org/10.3402/jev.v5.31655
- Bachurski, D., Schuldner, M., Nguyen, P.H., Malz, A., Reiners, K.S., Grenzi, P.C., Babatz, F., Schauss, A.C., Hansen, H.P., Hallek, M., et al. (2019). Extracellular vesicle measurements with nanoparticle tracking analysis - an accuracy and repeatability comparison between NanoSight NS300 and ZetaView. J. Extracell. Vesicles 8, 1596016. https://doi.org/10.1080/20013078.2019.1596016
- Battistelli, M. and Falcieri, E. (2020). Apoptotic bodies: particular extracellular vesicles involved in intercellular communication. Biology (Basel) 9, 21. https://doi.org/10.3390/biology9010021
- Boing, A.N., van der Pol, E., Grootemaat, A.E., Coumans, F.A., Sturk, A., and Nieuwland, R. (2014). Single-step isolation of extracellular vesicles by size-exclusion chromatography. J. Extracell. Vesicles 3, 10.3402/jev.v3.23430.
- Bracewell, D.G., Francis, R., and Smales, C.M. (2015). The future of host cell protein (HCP) identification during process development and manufacturing linked to a risk-based management for their control. Biotechnol. Bioeng. 112, 1727-1737. https://doi.org/10.1002/bit.25628
- Busatto, S., Vilanilam, G., Ticer, T., Lin, W.L., Dickson, D.W., Shapiro, S., Bergese, P., and Wolfram, J. (2018). Tangential flow filtration for highly efficient concentration of extracellular vesicles from large volumes of fluid. Cells 7, 273. https://doi.org/10.3390/cells7120273
- Cao, J., Wang, B., Tang, T., Lv, L., Ding, Z., Li, Z., Hu, R., Wei, Q., Shen, A., Fu, Y., et al. (2020). Three-dimensional culture of MSCs produces exosomes with improved yield and enhanced therapeutic efficacy for cisplatin-induced acute kidney injury. Stem Cell Res. Ther. 11, 206. https://doi.org/10.1186/s13287-020-01719-2
- Chen, A.K., Chen, X., Choo, A.B., Reuveny, S., and Oh, S.K. (2011). Critical microcarrier properties affecting the expansion of undifferentiated human embryonic stem cells. Stem Cell Res. 7, 97-111. https://doi.org/10.1016/j.scr.2011.04.007
- Chitoiu, L., Dobranici, A., Gherghiceanu, M., Dinescu, S., and Costache, M. (2020). Multi-omics data integration in extracellular vesicle biology-utopia or future reality? Int. J. Mol. Sci. 21, 8550. https://doi.org/10.3390/ijms21228550
- Choi, D., Go, G., Kim, D.K., Lee, J., Park, S.M., Di Vizio, D., and Gho, Y.S. (2020). Quantitative proteomic analysis of trypsin-treated extracellular vesicles to identify the real-vesicular proteins. J. Extracell. Vesicles 9, 1757209. https://doi.org/10.1080/20013078.2020.1757209
- Choi, D.S., Kim, D.K., Kim, Y.K., and Gho, Y.S. (2013). Proteomics, transcriptomics and lipidomics of exosomes and ectosomes. Proteomics 13, 1554-1571. https://doi.org/10.1002/pmic.201200329
- Corso, G., Mager, I., Lee, Y., Gorgens, A., Bultema, J., Giebel, B., Wood, M.J.A., Nordin, J.Z., and Andaloussi, S.E. (2017). Reproducible and scalable purification of extracellular vesicles using combined bind-elute and size exclusion chromatography. Sci. Rep. 7, 11561. https://doi.org/10.1038/s41598-017-10646-x
- de Boer, I.H., Alpers, C.E., Azeloglu, E.U., Balis, U.G.J., Barasch, J.M., Barisoni, L., Blank, K.N., Bomback, A.S., Brown, K., Dagher, P.C., et al. (2021). Rationale and design of the Kidney Precision Medicine Project. Kidney Int. 99, 498-510. https://doi.org/10.1016/j.kint.2020.08.039
- Doyle, L.M. and Wang, M.Z. (2019). Overview of extracellular vesicles, their origin, composition, purpose, and methods for exosome isolation and analysis. Cells 8, 727. https://doi.org/10.3390/cells8070727
- Goh, W.J., Zou, S., Ong, W.Y., Torta, F., Alexandra, A.F., Schiffelers, R.M., Storm, G., Wang, J.W., Czarny, B., and Pastorin, G. (2017). Bioinspired cell-derived nanovesicles versus exosomes as drug delivery systems: a cost-effective alternative. Sci. Rep. 7, 14322. https://doi.org/10.1038/s41598-017-14725-x
- Gurunathan, S., Kang, M.H., Jeyaraj, M., Qasim, M., and Kim, J.H. (2019). Review of the isolation, characterization, biological function, and multifarious therapeutic approaches of exosomes. Cells 8, 307. https://doi.org/10.3390/cells8040307
- Heath, N., Grant, L., De Oliveira, T.M., Rowlinson, R., Osteikoetxea, X., Dekker, N., and Overman, R. (2018). Rapid isolation and enrichment of extracellular vesicle preparations using anion exchange chromatography. Sci. Rep. 8, 5730. https://doi.org/10.1038/s41598-018-24163-y
- Huang, T. and He, J. (2017). Characterization of extracellular vesicles by size-exclusion high-performance liquid chromatography (HPLC). Methods Mol. Biol. 1660, 191-199. https://doi.org/10.1007/978-1-4939-7253-1_15
- Ilahibaks, N.F., Lei, Z., Mol, E.A., Deshantri, A.K., Jiang, L., Schiffelers, R.M., Vader, P., and Sluijter, J.P.G. (2019). Biofabrication of cell-derived nanovesicles: a potential alternative to extracellular vesicles for regenerative medicine. Cells 8, 1509. https://doi.org/10.3390/cells8121509
- Jo, W., Kim, J., Yoon, J., Jeong, D., Cho, S., Jeong, H., Yoon, Y.J., Kim, S.C., Gho, Y.S., and Park, J. (2014). Large-scale generation of cell-derived nanovesicles. Nanoscale 6, 12056-12064. https://doi.org/10.1039/c4nr02391a
- Konoshenko, M.Y., Lekchnov, E.A., Vlassov, A.V., and Laktionov, P.P. (2018). Isolation of extracellular vesicles: general methodologies and latest trends. Biomed Res. Int. 2018, 8545347. https://doi.org/10.1155/2018/8545347
- Kosanovic, M., Milutinovic, B., Goc, S., Mitic, N., and Jankovic, M. (2017). Ion-exchange chromatography purification of extracellular vesicles. Biotechniques 63, 65-71. https://doi.org/10.2144/000114575
- Kurian, T.K., Banik, S., Gopal, D., Chakrabarti, S., and Mazumder, N. (2021). Elucidating methods for isolation and quantification of exosomes: a review. Mol. Biotechnol. 63, 249-266. https://doi.org/10.1007/s12033-021-00300-3
- Lobb, R.J., Becker, M., Wen, S.W., Wong, C.S.F., Wiegmans, A.P., Leimgruber, A., and Moller, A. (2015). Optimized exosome isolation protocol for cell culture supernatant and human plasma. J. Extracell. Vesicles 4, 27031. https://doi.org/10.3402/jev.v4.27031
- Malm, M., Saghaleyni, R., Lundqvist, M., Giudici, M., Chotteau, V., Field, R., Varley, P.G., Hatton, D., Grassi, L., Svensson, T., et al. (2020). Evolution from adherent to suspension: systems biology of HEK293 cell line development. Sci. Rep. 10, 18996. https://doi.org/10.1038/s41598-020-76137-8
- Martinelle, K., Mattsson, A., Rippner-Blomqvist, B., and Lindner, E. (2010). Effect of different cell culture medium surfactants on cell growth and viability. In Cells and Culture, T. Noll, eds. (Dordrecht, Netherlands: Springer Science+Business Media B.V.), pp. 819-822.
- Mendt, M., Rezvani, K., and Shpall, E. (2019). Mesenchymal stem cell-derived exosomes for clinical use. Bone Marrow Transplant. 54(Suppl 2), 789-792. https://doi.org/10.1038/s41409-019-0616-z
- Mitchell, M.J., Billingsley, M.M., Haley, R.M., Wechsler, M.E., Peppas, N.A., and Langer, R. (2021). Engineering precision nanoparticles for drug delivery. Nat. Rev. Drug Discov. 20, 101-124. https://doi.org/10.1038/s41573-020-0090-8
- Nam, G.H., Choi, Y., Kim, G.B., Kim, S., Kim, S.A., and Kim, I.S. (2020). Emerging prospects of exosomes for cancer treatment: from conventional therapy to immunotherapy. Adv. Mater. 32, e2002440.
- Naslund, T.I., Gehrmann, U., Qazi, K.R., Karlsson, M.C., and Gabrielsson, S. (2013). Dendritic cell-derived exosomes need to activate both T and B cells to induce antitumor immunity. J. Immunol. 190, 2712-2719. https://doi.org/10.4049/jimmunol.1203082
- Oeyen, E., Van Mol, K., Baggerman, G., Willems, H., Boonen, K., Rolfo, C., Pauwels, P., Jacobs, A., Schildermans, K., Cho, W.C., et al. (2018). Ultrafiltration and size exclusion chromatography combined with asymmetrical-flow field-flow fractionation for the isolation and characterisation of extracellular vesicles from urine. J. Extracell. Vesicles 7, 1490143. https://doi.org/10.1080/20013078.2018.1490143
- Ou, Y.H., Zou, S., Goh, W.J., Wang, J.W., Wacker, M., Czarny, B., and Pastorin, G. (2021). Cell-derived nanovesicles as exosome-mimetics for drug delivery purposes: uses and recommendations. Methods Mol. Biol. 2211, 147-170. https://doi.org/10.1007/978-1-0716-0943-9_11
- Pegtel, D.M. and Gould, S.J. (2019). Exosomes. Annu. Rev. Biochem. 88, 487-514. https://doi.org/10.1146/annurev-biochem-013118-111902
- Raposo, G. and Stoorvogel, W. (2013). Extracellular vesicles: exosomes, microvesicles, and friends. J. Cell Biol. 200, 373-383. https://doi.org/10.1083/jcb.201211138
- Song, Y., Kim, Y., Ha, S., Sheller-Miller, S., Yoo, J., Choi, C., and Park, C.H. (2021). The emerging role of exosomes as novel therapeutics: biology, technologies, clinical applications, and the next. Am. J. Reprod. Immunol. 85, e13329.
- Szatanek, R., Baj-Krzyworzeka, M., Zimoch, J., Lekka, M., Siedlar, M., and Baran, J. (2017). The methods of choice for extracellular vesicles (EVs) characterization. Int. J. Mol. Sci. 18, 1153. https://doi.org/10.3390/ijms18061153
- Thery, C., Amigorena, S., Raposo, G., and Clayton, A. (2006). Isolation and characterization of exosomes from cell culture supernatants and biological fluids. Curr. Protoc. Cell Biol. Chapter 3, Unit 3.22.
- Thery, C., Witwer, K.W., Aikawa, E., Alcaraz, M.J., Anderson, J.D., Andriantsitohaina, R., Antoniou, A., Arab, T., Archer, F., Atkin-Smith, G.K., et al. (2018). Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines. J. Extracell. Vesicles 7, 1535750. https://doi.org/10.1080/20013078.2018.1535750
- Thery, C., Zitvogel, L., and Amigorena, S. (2002). Exosomes: composition, biogenesis and function. Nat. Rev. Immunol. 2, 569-579. https://doi.org/10.1038/nri855
- Thippabhotla, S., Zhong, C., and He, M. (2019). 3D cell culture stimulates the secretion of in vivo like extracellular vesicles. Sci. Rep. 9, 13012. https://doi.org/10.1038/s41598-019-49671-3
- U.S. Food and Drug Administration (2020). Chemistry, Manufacturing, and Control (CMC) Information for Human Gene Therapy Investigational New Drug Applications (INDs) (Maryland: U.S. Food and Drug Administration).
- Valkama, A.J., Leinonen, H.M., Lipponen, E.M., Turkki, V., Malinen, J., Heikura, T., Yla-Herttuala, S., and Lesch, H.P. (2018). Optimization of lentiviral vector production for scale-up in fixed-bed bioreactor. Gene Ther. 25, 39-46. https://doi.org/10.1038/gt.2017.91
- Veziroglu, E.M. and Mias, G.I. (2020). Characterizing extracellular vesicles and their diverse RNA contents. Front. Genet. 11, 700. https://doi.org/10.3389/fgene.2020.00700
- Webber, J. and Clayton, A. (2013). How pure are your vesicles? J. Extracell. Vesicles 2, 10.3402/jev.v2i0.19861.
- Yang, H.C., Ham, Y.M., Kim, J.A., and Rhee, W.J. (2021). Single-step equipment-free extracellular vesicle concentration using super absorbent polymer beads. J. Extracell. Vesicles 10, e12074.
- Yang, X.X., Sun, C., Wang, L., and Guo, X.L. (2019). New insight into isolation, identification techniques and medical applications of exosomes. J. Control. Release 308, 119-129. https://doi.org/10.1016/j.jconrel.2019.07.021
- Yim, N., Ryu, S.W., Choi, K., Lee, K.R., Lee, S., Choi, H., Kim, J., Shaker, M.R., Sun, W., Park, J.H., et al. (2016). Exosome engineering for efficient intracellular delivery of soluble proteins using optically reversible protein-protein interaction module. Nat. Commun. 7, 12277. https://doi.org/10.1038/ncomms12277
- Zhang, L., Jiao, G., Ren, S., Zhang, X., Li, C., Wu, W., Wang, H., Liu, H., Zhou, H., and Chen, Y. (2020a). Exosomes from bone marrow mesenchymal stem cells enhance fracture healing through the promotion of osteogenesis and angiogenesis in a rat model of nonunion. Stem Cell Res. Ther. 11, 38. https://doi.org/10.1186/s13287-020-1562-9
- Zhang, Y., Bi, J., Huang, J., Tang, Y., Du, S., and Li, P. (2020b). Exosome: a review of its classification, isolation techniques, storage, diagnostic and targeted therapy applications. Int. J. Nanomedicine 15, 6917-6934. https://doi.org/10.2147/IJN.S264498
- Zhao, X., Wu, D., Ma, X., Wang, J., Hou, W., and Zhang, W. (2020). Exosomes as drug carriers for cancer therapy and challenges regarding exosome uptake. Biomed. Pharmacother. 128, 110237. https://doi.org/10.1016/j.biopha.2020.110237