Journal of Environmental Science International (한국환경과학회지)

The Korean Environmental Sciences Society (한국환경과학회)
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Crop Effects on Soil Microorganism Activity and Community Composition in the Agricultural Environment

농경지에서 재배작물이 토양미생물활성 및 군집구성에 미치는 영향

  • Bak, Gyeryeong (Highland Agriculture Research Institute, National Institute of Crop Science) ;
  • Lee, Jeong-Tae (Highland Agriculture Research Institute, National Institute of Crop Science) ;
  • Jee, Samnyu (Highland Agriculture Research Institute, National Institute of Crop Science)
  • 백계령 (국립식량과학원 고령지농업연구소) ;
  • 이정태 (국립식량과학원 고령지농업연구소) ;
  • 지삼녀 (국립식량과학원 고령지농업연구소)
  • Received : 2021.02.10
  • Accepted : 2021.05.04
  • Published : 2021.05.31
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Abstract

Soil microorganism activity in an agricultural field is affected by various factors including climate conditions, soil chemical properties, and crop cultivation. In this study, we elucidate the correlation between microorganism activity and agricultural environment factors using the dehydrogenase activity (DHA) value, which is one of the indicators of soil microbial activity. As a result, the various factors noted above were related to the DHA value. Annual rainfall, soil Mg2+, bacterial and fungal diversities, types of crops, developmental stages, seasons, and cultivation status were highly correlated with the DHA value. Furthermore, next-generation sequencing (NGS) analysis was used to identify that the type of crop affected soil microbial compositions of both bacteria and fungi. Soil used for soybean cultivation showed the highest relative abundance for Verrucomicrobia, Planctomycetes, and Acidobacteria but Actinobacteria and Firmicutes had the lowest relative abundance. In the case of soil used for potato cultivation, Actinobacteria had the highest relative abundance but Proteobacteria had the lowest relative abundance. Armatimonadetes showed the highest relative abundance in soil used for cabbage cultivation. Among the fungal communities, Mortierellomycota had the highest relative abundance for soybean cultivation but the lowest relative abundance for cabbage cultivation; further, Rozellomycota, Chytridiomycota, and Cercozoa had the highest relative abundance for cabbage cultivation. Basidiomycota had the highest relative abundance for potato cultivation but the lowest relative abundance for soybean cultivation.

Keywords

Acknowledgement

이 논문은 농촌진흥청 연구사업 "고랭지 콩 도입 작부체계 개발 및 토양환경 개선효과 구명" 과제(과제번호: PJ01125903) 및 "고령지 농경지 이용형태 변화에 따른 토양환경 변동특성 평가" 과제(과제번호: PJ01346004)의 연구비에 의하여 지원되었음.

References

  1. Adak, T., Singha, A., Kumar, K., Shukla, S. K., Singh, A., Singh, V. K., 2014, Soil organic carbon, dehydrogenase activity, nutrient availability and leaf nutrient content as affected by organic and inorganic source of nutrient in mango orchard soil, J. Soil Sci. Plant Nutr., 14, 394-406.
  2. Bak, G. R., Lee, G. J., Kim, T. Y., 2019, The effects of soybean cultivation on soil microorganism activity, Korean. J. Environ. Agric., 38, 76-82. https://doi.org/10.5338/KJEA.2019.38.2.12
  3. Berg, G., Smalla, K., 2009, Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere, FEMS. Microbiol. Ecol., 68, 1-13. https://doi.org/10.1111/j.1574-6941.2009.00654.x
  4. Brzezinska, M., Stepniewska, Z., Stepniewski, W., 1998, Soil ozygen status and dehydrogenase activity, Soil. Biol. Biochem., 30, 1783-1790. https://doi.org/10.1016/S0038-0717(98)00043-1
  5. Casida, L. E., 1977, Micobial metabolic activity in soil as measured by dehydrogenase determination, Appl. Environ. Microb., 34, 630-636. https://doi.org/10.1128/aem.34.6.630-636.1977
  6. Chu, H., Lin, X., Fujii, T., Morimoto, S., Yagi, K., Hu, J., Zhang, J., 2007, Soil microbial biomass, dehydrogenase activity, bacterial community structure in response to long-term fertilizer management, Soil. Biol. Biochem., 39, 2971-2976. https://doi.org/10.1016/j.soilbio.2007.05.031
  7. Dick, R. P., 1994, Soil enzyme activities as indicators of soil quality, Defining soil quality for a sustainable environment, 35, 107-124.
  8. Dinesh, R., Dubey, R. P., Prasad, G. S., 1998, Soil microbial biomass and enzyme activities as influenced by organic manure incorporation into soils of a rice-rice system, J. Agro. Crop Sci., 181, 173-178. https://doi.org/10.1111/j.1439-037X.1998.tb00414.x
  9. Garcia, C., Hernandez, T., Costa, F., 1997, Potential use of dehydrogenase activity as an index of microbial activity in degraded soils, Commun. Soil. Sci. Plant. Anal., 28, 123-134. https://doi.org/10.1080/00103629709369777
  10. Grzadziel, J., Galazka, A., 2018, Microplot long-term experiment reveals strong soil type influence on bacteria composition and its functional diversity, Appl. Soil. Ecol., 117-123.
  11. Joa, J. H., Moon, D. G., Chun, S. J., Kim, C. H., Choi, K. S., Hyun, H. N., Kang, U. G., 2009, Effect of temperature on soil microbial biomass, enzyme activities, and PLFA content during incubation period of soil treated with organic materials, Korean. J. Soil. Sci. Fert., 42, 500-512.
  12. Kim, Y. H., Lim, J. H., An, C. H., Jung, B. K., Kim, S. D., 2012, Soil microbial community analysis using soil enzyme activities in red pepper field treated microbial agents, J. Appl. Biol. Chem., 55, 47-53. https://doi.org/10.3839/jabc.2011.058
  13. Langer, U., Gunther, T. H., 2001, Effects of alkaline dust deposits from phosphate fertilizer production on microbial biomass and enzyme activities in grassland soils, Env. Pollut., 112, 321-327. https://doi.org/10.1016/S0269-7491(00)00148-2
  14. Lee, Y. M., Ahn, J. H., Choi, Y. M., Weon, H. Y., Yoon, J. H., Song, J. K., 2015, Bacterial core community in soybean rhizosphere, Korean. J. Microbiol., 51, 347-354. https://doi.org/10.7845/kjm.2015.5052
  15. Luo, P., Han, X., Wang, Y., Han, M., Shi, H., Liu, N., Bai, H., 2015, Influence of long-term fertilization on soil microbial biomass, dehydrogenase activity, and bacterial and fungal community structure in a brown soil of northeast China, Ann. Microbiol., 65, 533-542. https://doi.org/10.1007/s13213-014-0889-9
  16. Ma del Carmen, O. M., Ma del Carmen, R. G., Bernard, R. G., Gustovo, S., 2018, Microbiome engineering to improbe biocontrol and plant growth-promoting mechanisms, Microbiol. Res., 208, 25-31. https://doi.org/10.1016/j.micres.2018.01.005
  17. Park, J. M., Lee, I. B., Kang, Y. I., Hwang, K. S., 2009, Effects of mineral and organic fertilizations on yield of hot pepper and changes in chemical properties of upland soil, Korean J. Hortic. Sci. Technol., 27, 24-29.
  18. Park, K. H., Yun, H. J., Yul, K. Y., Yun, J. C., Lee, J. J., Hwang, H. A., Kim, K. D., Jin, Y. I., 2011, The monitoring of agricultural environment in Daegwallyeong area, Korean. J. Soil Sci. Fert., 44, 1027-1034. https://doi.org/10.7745/KJSSF.2011.44.6.1027
  19. Park, K. L., Yuko, S. G., Hong, S. G., Lee, C. R., Ahn, M. S., Kim, S. C., Hashimoto, T., 2016, Study on characteristics of chemical properties and microbial flora of organic farming soil in Korea, J. Korea. Org. Res. Recy. Ass., 24, 77-83. https://doi.org/10.17137/korrae.2016.24.4.77
  20. Paul, E. A., Clark, F. E., 1989, Soil microbiology and biochemistry, Academic press, San Diego, CA, USA, 1-10.
  21. Pfeiffer, S., Mitter, B., Oswald, A., Schloter, H. B., Schloter, M., Declerck, S., Sessitsch, A., 2016, Rhizosphere microbiomes of potato cultivated in the High Andes show stable and dynamic core microbiomes with different responses to plant development, FEMS. Microbiol. Ecol., 93, 1-12.
  22. Quilchano, C., Maranon, T., 2002, Dehydrogenase activity in Mediterranean forest soils, Biol. Fert. Soil., 35, 102-107. https://doi.org/10.1007/s00374-002-0446-8
  23. Rogers, J. E., Li, S. W., 1985, Effect of metals and other inorganic ions on soil microbial activity: soil dehydrogenase assay as a simple toxicity test, Bull. Environ. Contam. Toxicol., 34, 858-865. https://doi.org/10.1007/BF01609817
  24. Ross, D. J., Roberts, H. S., 1970, Enzyme activities and oxygen uptakes of soil under pasture in temperature and rainfall sequences, Eur. J. Soil Sci., 21, 368-381. https://doi.org/10.1111/j.1365-2389.1970.tb01187.x
  25. Sasse, J., Martinoia, E., Northen, T., Feed your friends: do plant exudates shape the root microbiome?, Trends. Plant. Sci., 23, 25-41.
  26. Sebiomo, A., Ogundero, V. W., Bankole, S. A., 2011, Effect of four herbicides on microbial population, soil organic matter and dehydrogenase activity, African. J. Biotech., 10, 770-778.
  27. Soil information system in Korea, 2015-2020, Rural development administration, http://soil.rda.go.kr.
  28. Weather information data, 2015-2020, Korea meteorological administration, https://data.kma.go.kr.
  29. Yang, C., Liu, N., Zhang, Y., 2019, Soil aggregates regulate the impact of soil bacterial and fungal communities on soil respiration, Geoderma, 337, 444-452. https://doi.org/10.1016/j.geoderma.2018.10.002