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Genetic Diversity, Pathogenicity, and Fungicide Response of Fusarium oxysporum f. sp. fragariae Isolated from Strawberry Plants in Korea

국내 딸기 시들음병균 Fusarium oxysporum f. sp. fragariae의 유전적 다양성, 병원성과 살균제 반응

  • 남명현 (충남농업기술원 딸기연구소) ;
  • 김현숙 (충남농업기술원 딸기연구소) ;
  • 박명수 (서울대학교 자연과학대학 생명과학부) ;
  • 민지영 (충북대학교 농업생명환경대학 식물의학과) ;
  • 김흥태 (충북대학교 농업생명환경대학 식물의학과)
  • Received : 2020.05.26
  • Accepted : 2020.06.29
  • Published : 2020.06.30

Abstract

Fusarium wilt caused by Fusarium oxysporum f. sp. fragariae (Fof) is the most important diseases of a strawberry field in Korea. We surveyed phylogenetic analysis, pathogenicity test, and fungicide response about Fof isolates isolated from Korea. Twenty-seven isolates of F. oxysporum isolated from strawberry plants were conducted in this study. Specific amplification by Fof specific primer was confirmed in all 26 isolates except Fo080701 isolate. The nuclear ribosomal intergenic spacer region and the translation elongation factor EF-lα gene sequences of isolates revealed three main lineages. Most of all isolates were contained DNA lineage group 1, but 2 and 3 group was shown only one and three isolates, respectively. All isolates were shown in pathogenicity with cv. Seolhyang. The EC50 mean values of prochloraz ranged 0.02-0.1 ㎍/ml except for Fo080701 and effectively inhibited mycelial growth at low concentrations. The EC50 value of metconazole was also 0.04-0.22 ㎍/ml, showing a similar inhibitory effect to that of prochloraz. The EC50 value of pyraclostrobin was 0.23-168.01 ㎍/ml, which was different according to the strain. In the field trial, boscalid+fludioxonil, fluxapyroxad+pyraclostrobin, and prochloraz manganese were selected as the effective fungicides for controlling Fusarium wilt.

Fusarium oxysporum f. sp. fragariae (Fof) 에 의한 딸기 시들음병은 국내 딸기재배에서 가장 중요한 병해 중 하나이다. 국내 발생하는 Fof의 특성을 분석하고자 시들음병균의 유전적 다양성, 병원성과 살균제 반응을 조사하였다. 분리균은 Fo080701를 제외한 모든 균주에서 Fof 특이적 primer에 증폭되었다. 분리균의 nuclear ribosomal intergenic spacer region과 EF-1α sequences 분석 결과 3개의 lineage를 형성하였다. 대부분의 분리균은 lineage 1에 속하였으며 lineage 3에 3개 균주와 lineage 2에 1개 균주가 포함되었다. 분리된 모든 균주는 설향품종에 병원성을 보였다. Prochloraz는 DNA lineage 2에 속하는 Fo080701균주를 제외하곤 시들음병균의 EC50값이 0.02-0.1 ㎍/ml로 낮은 농도에서 효과적으로 균사 생장을 억제하였다. Metconazole의 EC50값도 0.04-0.22 ㎍/ml로 prochloraz와 비슷한 억제 효과를 보였다. Pyraclostrobin의 EC50값은 0.23-168.01 ㎍/ml로 균주에 따라 차이가 컸다. 딸기 재배포장에서 boscalid+fludioxonil, fluxapyroxad+pyraclostrobin, prochloraz manganese이 딸기 시들음병 방제에 효과적이었다.

Keywords

References

  1. Amini, J. and Sidovich, D. F. 2010. The effects of fungicides on Fusarium oxysporum f. sp. lycopersici associated with Fusarium wilt of tomato. J. Plant Prot. Res. 50: 172-178.
  2. Arntzen, C. J., Linck, A. J. and Cunningham, W. P. 1970. The effects of 3-amino-s-triazole on flax root apices. Bot. Gaz. 131: 14-23. https://doi.org/10.1086/336507
  3. Arroyo, F. T., Llergo, Y., Aguado, A. and Romero, F. 2009. First report of Fusarium wilt caused by Fusarium oxysporum on strawberry in Spain. Plant Dis. 93: 323.
  4. Avenot, H., Morgan, D. P. and Michailides, T. J. 2008. Resistance to pyraclostrobin, boscalid and multiple resistance to Pristine (pyraclostrobin + boscalid) fungicide in Alternaria alternata causing alternaria late blight of pistachios in California. Plant Pathol. 57: 135-140. https://doi.org/10.1111/j.1365-3059.2007.01701.x
  5. Burkhardt, A., Henry, P. M., Koike, S. T., Gordon, T. R. and Martin, F. 2019. Detection of Fusarium oxysporum f. sp. fragariae from infected strawberry plants. Plant Dis. 103: 1006-1013. https://doi.org/10.1094/PDIS-08-18-1315-RE
  6. Burlakoti, P., Rivera, V. V., Burlakoti, R. R., Nelson, R., Adhikari, T. B., Secor, G. A. et al. 2010. Baseline sensitivity of Fusarium species associated with Fusarium diseases to metconazole, triticonazole, and thiabendazole fungicides. J. Sugar Beet Res. 47: 23-34. https://doi.org/10.5274/jsbr.47.1.23
  7. Carbone, I. and Kohn, L. M. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91: 553-556. https://doi.org/10.2307/3761358
  8. Castro-Franco, J. and Davalos-Gonzalez, P. A. 1990. Aetiology of <> or root and top rot of strawberries in Irapuato, Gto. Rev. Mex. Fitopatol. 8: 80-86. (In Spanish)
  9. Cho, C. T. and Moon, B. J. 1985. Chemical control of Fusarium wilt of strawberry caused by Fusarium oxysporum f. sp. fragariae. Korean J. Plant Pathol. 1: 28-32. (In Korean)
  10. Cruz Jimenez, D. R., Ellis, M. L., Munkvold, G. P. and Leandro, L. F. S. 2018. Isolate-cultivar interactions, in vitro growth, and fungicide sensitivity of Fusarium oxysporum isolates causing seedling disease on soybean. Plant Dis. 102: 1928-1937. https://doi.org/10.1094/PDIS-03-17-0380-RE
  11. Dinler, H., Benlioglu, S. and Benlioglu, K. 2016. Occurrence of Fusariumwilt caused by Fusarium oxysporum on strawberry transplants inAydin province in Turkey. Australas. Plant Dis. Notes 11: 10. https://doi.org/10.1007/s13314-016-0196-3
  12. Golzar, H., Phillips, D. and Mack, S. 2007. Occurrence of strawberry root and crown rot in Western Australia. Australas. Plant Dis. Notes 2: 145-147. https://doi.org/10.1071/DN07057
  13. Henry, P. M., Kirkpatrick, S. C., Islas, C. M., Pastrana, A. M., Yoshisato, J. A., Koike, S. T. et al. 2017. The population of Fusarium oxysporum f. sp. fragariae, cause of Fusarium wilt of strawberry, in California. Plant Dis. 101: 550-556. https://doi.org/10.1094/PDIS-07-16-1058-RE
  14. Hong, S. W., Kim, D.-R., Kim, J. S., Cho, G., Jeon, C. W. and Kwak, Y.- S. 2018. Development qRT-PCR protocol to predict strawberry Fusarium wilt occurrence. Plant Pathol. J. 34: 163-170. https://doi.org/10.5423/PPJ.OA.12.2017.0265
  15. Huang, Y., Zhen, W., Zhang, L., Zhang, G., Tian, L., Cheng, H. et al. 2005. Separation of causal organisms and biocontrol of strawberry (Fragaria ananassa Dach) replant disease. Biotechnology 15: 74-76.
  16. Katoh, K. and Standley, D. M. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol. Biol. Evol. 30: 772-780. https://doi.org/10.1093/molbev/mst010
  17. Kim, C. H., Seo, H. D., Cho, W. D. and Kim, S. B. 1982. Studies on varietal resistance and chemical control to the wilt of strawberry caused by Fusarium oxysporum. Korean J. Plant Prot. 21: 61-67. (In Korean)
  18. Kim, D.-R., Gang, G.-H., Cho, H.-J., Yoon, H.-S. and Kwak, Y.-S. 2015. Evaluation of antimicrobial activity and disease control efficacy of sodium dichloroisocyanurate (NaDCC) against major strawberry diseases. Korean J. Pestic. Sci. 19: 47-53. (In Korean) https://doi.org/10.7585/kjps.2015.19.1.47
  19. Kim, J.-S., Kang, N. J., Kwak, Y.-S. and Lee, C. 2017. Investigation of genetic diversity of Fusarium oxysporum f. sp. fragariae using PCR-RFLP. Plant Pathol. J. 33: 140-147. https://doi.org/10.5423/PPJ.FT.01.2017.0011
  20. Kim, J. T., Min, J. Y. and Kim, H. T. 2006. Response to fungicides of Colletotrichum species isolated from infected tissues of several crops. Res. Plant Dis. 12: 32-39. (In Korean) https://doi.org/10.5423/RPD.2006.12.1.032
  21. Kim, S., Min, J. and Kim, H. T. 2019. Occurrence and mechanism of fungicide resistance in Colletotrichum acutatum causing pepper anthracnose against pyraclostrobin. Korean J. Pestic. Sci. 23: 202-211. (In Korean) https://doi.org/10.7585/kjps.2019.23.3.202
  22. Kim, Y. K. and Xiao, C. L. 2010. Resistance to pyraclostrobin and boscalid in populations of Botrytis cinerea from stored apples in Washington State. Plant Dis. 94: 604-612. https://doi.org/10.1094/PDIS-94-5-0604
  23. Kodama, T. 1974. Characteristics of strawberry yellows disease caused by Fusarium and cultivar resistance. Bull. Nara Agric. Exp. Stn. 6: 68-75. (In Japanese)
  24. Koike, S. and Gordon, T. R. 2015. Management of Fusarium wilt of strawberry. Crop Prot. 73: 67-72. https://doi.org/10.1016/j.cropro.2015.02.003
  25. Koike, S. T., Kirkpatrick, S. C. and Gordon, T. R. 2009. Fusarium wilt of strawberry caused by Fusarium oxysporum in California. Plant Dis. 93: 1077.
  26. Kwon, S. K., Jeon, C.-W., Nam, M. H. and Kwak, Y.-S. 2020. Evaluation of fungicides sensitivities of strawberry wilt disease pathogen, Fusarium oxysporum f sp. fragariae. Korean J. Pestic. Sci. 24: 34-42. (In Korean) https://doi.org/10.7585/kjps.2020.24.1.34
  27. Li, Y., Mao, L., Yan, D., Ma, T., Shen, J., Guo, M. et al. 2014. Quantification of Fusarium oxysporum in fumigated soils by a newly developed realtime PCR assay to assess the efficacy of fumigants for Fusarium wilt disease in strawberry plants. Pest Manag. Sci. 70: 1669-1675. https://doi.org/10.1002/ps.3700
  28. Masiello, M., Somma, S., Ghionna, V., Logrieco, A. F. and Moretti, A. 2019. In vitro and in field response of different fungicides against Aspergillus flavus and Fusarium species causing ear rot disease of maize. Toxins 11: 11. https://doi.org/10.3390/toxins11010011
  29. Miller, N. F., Standish, J. R. and Quesada-Ocampo, L. M. 2020. Sensitivity of Fusarium oxysporum f. sp. niveum to prothioconazole and pydiflumetofen in vitro and efficacy for Fusarium wilt management in watermelon. Plant Health Prog. 21: 13-18. https://doi.org/10.1094/php-08-19-0056-rs
  30. Nam, M. H., Jung, S. K., Kim, N. G., Yoo, S. J. and Kim, H. G. 2005. Resistance analysis of cultivars and occurrence survey of Fusarium wilt on strawberry. Res. Plant Dis. 11: 35-38. (In Korean) https://doi.org/10.5423/RPD.2005.11.1.035
  31. Nelson, P. E., Toussoun, T. A. and Marasas, W. F. O. 1983. Fusarium Species: An Illustrated Manual for Identification. Pennsylvania State University Press, University Park, PA, USA. 193 pp.
  32. O'Donnell, K., Gueidan, C., Sink, S., Johnston, P. R., Crous, P. W., Glenn, A. et al. 2009. A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex. Fungal Genet. Biol. 46: 936-948. https://doi.org/10.1016/j.fgb.2009.08.006
  33. Okamoto, H., Fujii, S., Kato, K. and Yoshida, A. 1970. A new strawberry disease Fusarium wilt. Plant Prot. 24: 231-235. (In Japanese)
  34. Park, M. S., Seo, G. S., Bae, K. S. and Yu, S. H. 2005. Characterization of Trichoderma spp. associated with green mold of oyster mushroom by PCR-RFLP and sequence analysis of ITS regions of rDNA. Plant Pathol. J. 21: 229-236. https://doi.org/10.5423/PPJ.2005.21.3.229
  35. Pastrana, A. M., Basallote-Ureba, M. J., Aguado, A. and Capote, N. 2017. Potential inoculum sources and incidence of strawberry soilborne pathogens in Spain. Plant Dis. 101: 751-760. https://doi.org/10.1094/PDIS-08-16-1177-RE
  36. Paynter, M. L., Czislowski, E., Herrington, M. E. and Aitken, E. A. B. 2016. Differences in pathogenicity, genetic variability and cultivar responses among isolates of Fusarium oxysporum from strawberry in Australia. J. Am. Soc. Hortic. Sci. 141: 645-652. https://doi.org/10.21273/jashs03888-16
  37. Petkar, A., Langston, D. B., Buck, J. W., Stevenson, K. L. and Ji, P. 2017. Sensitivity of Fusarium oxysporum f. sp. niveum to prothioconazole and thiophanate-methyl and gene mutation conferring resistance to thiophanate-methyl. Plant Dis. 101: 366-371. https://doi.org/10.1094/PDIS-09-16-1236-RE
  38. Shin, J. H., Han, J. H. and Kim, K. S. 2018. Isolation of Asparagus crown and root rot pathogen Fusarium oxysporum and evaluation of fungicides for disease control. J. Agric. Life Environ. Sci. 30: 152-160. (In Korean)
  39. Stamatakis, A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. https://doi.org/10.1093/bioinformatics/btl446
  40. Stankovic, I., Ristic, D., Vucurovic, A., Milojevic, K., Nikolic, D., Krstic, B. et al. 2014. First report of Fusarium wilt of strawberry caused by Fusarium oxysporum in Serbia. Plant Dis. 98: 1435.
  41. Suga, H., Hirayama, Y., Morishima, M., Suzuki, T., Kageyama, K. and Hyakumachi, M. 2013. Development of PCR primers to identify Fusarium oxysporum f. sp. fragariae. Plant Dis. 97: 619-625. https://doi.org/10.1094/PDIS-07-12-0663-RE
  42. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. and Kumar, S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28: 2731-2739. https://doi.org/10.1093/molbev/msr121
  43. Williamson, M., Fernandez-Ortuno, D. and Schnabel, G. 2012. First report of Fusarium wilt of strawberry caused by Fusarium oxysporum in South Carolina. Plant Dis. 96: 911.
  44. Winks, B. L. and Williams, Y. N. 1965. A wilt of strawberry caused by a new form of Fusarium oxysporum. Queensland J. Agric. Anim. Sci. 22: 475-479.