참고문헌
- Abel S, Oeller PW, Theologis, A (1994) Early auxin-induced genes encode short-lived nuclear proteins. Proc Natl Acad Sci USA 91:326-330 https://doi.org/10.1073/pnas.91.1.326
- Abel S, Nguyen MD, Theologis A (1995) The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana. J Mol Biol 251(4):533-549 https://doi.org/10.1006/jmbi.1995.0454
- Ainley WM, Walker JC, Nagao RT, Key JL (1988) Sequence and characterization of two auxin-regulated genes from soybean. J Biol Chem 263(22):10658-10666 https://doi.org/10.1016/S0021-9258(18)38022-0
- Bae EK, Lee H, Lee JS, Noh EW (2009) Differential expression of a poplar SK2-type dehydrin gene in response to various stresses. BMB Rep 42(7):439-443 https://doi.org/10.5483/BMBRep.2009.42.7.439
- Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S (2002) Extensive feature detection of N-terminal protein sorting signals. Bioinformatics 18(2):298-305 https://doi.org/10.1093/bioinformatics/18.2.298
- Bjorklund S, Antti H, Uddestrand I, Moritz T, Sundberg B (2007) Cross-talk between gibberellin and auxin in development of Populus wood: gibberellin stimulates polar auxin transport and has a common transcriptome with auxin. Plant J 52(3):499-511 https://doi.org/10.1111/j.1365-313X.2007.03250.x
- Calderon Villalobos LI, Lee S, De Oliveira C, Ivetac A, Brandt W, Armitage L, Sheard LB, Tan X, Parry G, Mao H, Zheng N, Napier R, Kepinski S, Estelle M (2012) A combinatorial TIR1/AFB-Aux/IAA co-receptor system for differential sensing of auxin. Nat Chem Biol 8(5):477-485 https://doi.org/10.1038/nchembio.926
- Chomczynski P, Sacchi N (1987) Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 162(1):156-159 https://doi.org/10.1006/abio.1987.9999
- Du H, Liu H, Xiong L (2013) Endogenous auxin and jasmonic acid levels are differentially modulated by abiotic stresses in rice. Front Plant Sci 4:397 https://doi.org/10.3389/fpls.2013.00397
- Dreher KA, Brown J, Saw RE, Callis J (2006) The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsiveness. Plant Cell 18(3):699-714 https://doi.org/10.1105/tpc.105.039172
- Dharmasiri N, Dharmasiri S, Jones AM, Estelle M (2003) Auxin action in a cell-free system. Curr Biol 13(16):1418-1422 https://doi.org/10.1016/S0960-9822(03)00536-0
- Druart N, Johansson A, Baba K, Schrader J, Sjodin A, Bhalerao RB, Resman L, Trygg J, Moritz T, Bhalerao RP (2007) Environmental and hormonal regulation of the activity-dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks. Plant J 50(4):557-573 https://doi.org/10.1111/j.1365-313X.2007.03077.x
- Fukaki H, Tameda S, Masuda H, Tasaka M (2002) Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT/IAA14 gene of Arabidopsis. Plant J 29(2):153-168 https://doi.org/10.1046/j.0960-7412.2001.01201.x
- Goldfarb B, Lanz-Garcia C, Lian Z, Whetten R (2003) Aux/IAA gene family is conserved in the gymnosperm, loblolly pine (Pinus taeda). Tree physiol 23(17):1181-1192 https://doi.org/10.1093/treephys/23.17.1181
- Hagen G, Guilfoyle T (2002) Auxin-responsive gene expression: genes, promoters and regulatory factors. Plant Mol Biol 49(3-4):373-385 https://doi.org/10.1023/A:1015207114117
- Han X, Xu X, Fang DD, Zhang T, Guo W (2012) Cloning and expression analysis of novel Aux/IAA family genes in Gossypium hirsutum. Gene 503(1):83-91 https://doi.org/10.1016/j.gene.2012.03.069
- Ishida T, Adachi S, Yoshimura M, Shimizu K., Umeda M, Sugimoto K. (2010) Auxin modulates the transition from the mitotic cycle to the endocycle in Arabidopsis. Development 137(1):63-71 https://doi.org/10.1242/dev.035840
- Jung H, Lee DK, Choi YD, Kim JK (2015) OsIAA6, a member of the rice Aux/IAA gene family, is involved in drought tolerance and tiller outgrowth. Plant Sci 236:304312
- Kalluri UC, Difazio SP, Brunner AM, Tuskan GA (2007) Genome-wide analysis of Aux/IAA and ARF gene families in Populus trichocarpa. BMC Plant Biol 7:59. doi:10.1186/1471-2229-7-59
- Kang HJ, Mon HK, Park SY, Kim PG (2004) Anatomical characteristics of hyperhydric shoots occurring in in vitro culture of peace poplar. Kor J Plant Biotechnol 31(2):145-149 https://doi.org/10.5010/JPB.2004.31.2.145
- Kim J, Harter K, Theologis A (1997) Protein-protein interactions among the Aux/IAA proteins. Proc Natl Acad Sci USA 94(22):11786-11791 https://doi.org/10.1073/pnas.94.22.11786
-
Lee H, Bae EK, Park SY, Sjodin A, Lee JS, Noh EW, Jansson S (2007) Growth-phase-dependent gene expression profiling of poplar (Populus alba
${\times}$ Populus tremula var. glandulosa) suspension cells. Physiol Plant 131(4):599-613 https://doi.org/10.1111/j.1399-3054.2007.00987.x -
Lee H, Lee JS, Noh EW, Bae EK, Choi YI, Han MS (2005) Generation and analysis of expressed sequence tags from poplar (Populus
$alba{\times}P$ . tremula var. glandulosa) suspension cells. Plant Sci 169(6):1118-1124 https://doi.org/10.1016/j.plantsci.2005.07.013 - Leyser HM, Pickett FB, Dharmasiri S, Estelle M (1996) Mutations in the AXR3 gene of Arabidopsis result in altered auxin response including ectopic expression from the SAUR-AC1 promoter. Plant J 10(3):403-413 https://doi.org/10.1046/j.1365-313x.1996.10030403.x
- Liscum E, Reed J (2002) Genetics of Aux/IAA and ARF action in plant growth and development. Plant Mol Biol 49:387-400 https://doi.org/10.1023/A:1015255030047
- Liu S, Hu Q, Luo S, Li A, Yang X, Wnag X, Wang S (2015) Expression of wild-type PtrIAA14.1, a poplar Aux/IAA gene causes morphological changes in Arabidopsis. Front Plant Sci 6:388. doi:10.3389/fpls.2015.00388
- Luo J, Zhou JJ, Zhang JZ (2018) Aux/IAA gene family in plants: molecular structure, regulation, and function. Int J Mol Sci 19(1):259. doi:10.3390/ijms19010259
- Moyle R, Schrader J, Stenberg A, Olsson O, Saxena S, Sandberg G, Bhalerao RP (2002) Environmental and auxin regulation of wood formation involves members of the Aux/IAA gene family in hybrid aspen. Pant J 31(6):675-685
- Murashige T, Skoog FA (1962) Revised medium for rapid growth and bioassay with tobacco tissue culture. Physiol Plant 15:473-497 https://doi.org/10.1111/j.1399-3054.1962.tb08052.x
- Nilsson J, Karlberg A, Antti H, Lopez-Vernaza M, Mellerowicz E, Perrot-Rechenmann C, Sandberg G, Bhalerao RP (2008). Dissecting the molecular basis of the regulation of wood formation by auxin in hybrid aspen. Plant Cell 20:843-855 https://doi.org/10.1105/tpc.107.055798
- Parry G, Calderon-Villalobos LI, Prigge M, Peret B, Dharmasiri S, Itoh H, Lechner E, Gray WM, Bennett M, Estelle M (2009) Complex regulation of the TIR1/AFB family of auxin receptors. Proc Natl Acad Sci USA 106(52):22540-22545 https://doi.org/10.1073/pnas.0911967106
- Ramos JA, Zenser N, Leyser O, Callis J (2001) Rapid degradation of auxin/indoleacetic acid proteins requires conserved amino acids of domain II and is proteasome dependent. Plant Cell 13(10):2349-2360 https://doi.org/10.1105/tpc.010244
- Reed JW (2001) Roles and activities of Aux/IAA proteins in Arabidopsis. Trends Plant Sci 6(9):420-425 https://doi.org/10.1016/S1360-1385(01)02042-8
- Reitz MU, Gifford ML, Schafer P (2015) Hormone activities and the cell cycle machinery in immunity-triggered growth inhibition. J Exp Bot 66(8):2187-2197 https://doi.org/10.1093/jxb/erv106
- Rogg LE, Bartel B (2001) Auxin signaling: derepression through regulated proteolysis. Dev Cell 1(5):595-604 https://doi.org/10.1016/S1534-5807(01)00077-6
- Sato A, Yamamoto KT (2008) Overexpression of the non-canonical Aux/IAA genes causes auxin-related aberrant phenotypes in Arabidopsis. Physiol Plant 133(2):397-405 https://doi.org/10.1111/j.1399-3054.2008.01055.x
- Shani E, Salehin M, Zhang Y, Sanchez SE, Doherty C, Wang R, Mangado CC, Song L, Tal I, Pisanty O, Ecker JR, Kay SA, Pruneda-Paz J, Estelle M (2017) Plant stress tolerance requires auxin-sensitive Aux/IAA transcriptional repressors. Curr Biol 27(3):437-444 https://doi.org/10.1016/j.cub.2016.12.016
- Shibasaki K, Uemura M, Tsurumi S, Rahman A (2009) Auxin response in Arabidopsis under cold stress: underlying molecular mechanisms. Plant Cell 21(12):3823-3838 https://doi.org/10.1105/tpc.109.069906
- Shinozaki K, Yamaguchi-Shinozaki K (2000) Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Curr Opin Plant Biol 3(3):217-223 https://doi.org/10.1016/S1369-5266(00)00067-4
- Sigrist CJ, De Castro E, Langendijk-Genevaux PS, Le Saux V, Bairoch A, Hulo N (2005) ProRule: a new database containing functional and structural information on PROSITE profiles. Bioinformatics 21(21):4060-4066 https://doi.org/10.1093/bioinformatics/bti614
- Song Y, Wang L, Xiang L (2009a) Comprehensive expression profiling analysis OsIAA gene family in developmental processes and in response to phytohormone and stess treatements. Planta 229:577-591 https://doi.org/10.1007/s00425-008-0853-7
- Song Y, You J, Xiong L (2009b) Characterization of OsIAA1 gene, a member of rice Aux/IAA family involved in auxin and brassinosteroid hormone responses and plant morphogenesis. Plant Mol Biol 70(3):297-309 https://doi.org/10.1007/s11103-009-9474-1
- Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98(3):503-517 https://doi.org/10.1016/S0022-2836(75)80083-0
- Sun J, Xu Y, Ye S, Jiang H, Chen Q, Liu F, Zhou W, Chen R, Li X, Tietz O, Wu X, Cohen JD, Palme K, Li C (2009) Arabidopsis ASA1 is important for jasmonate-mediated regulation of auxin biosynthesis and transport during lateral root formation. Plant Cell 21(5):1495-1511 https://doi.org/10.1105/tpc.108.064303
- Tan X, Calderon-Villalobos LI, Sharon M, Zheng C, Robinson CV, Estelle M, Zheng N (2007) Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature 446(7136):640-645 https://doi.org/10.1038/nature05731
- Teale WD, Paponov IA, Palme K (2006) Auxin in action: signalling, transport and the control of plant growth and development. Nat Rev Mol Cell Biol 7(11):847-59. doi:10.1038/nrm2020
- Tian Q, Reed JW (1999) Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene. Development 26(4):711-721 https://doi.org/10.1242/dev.126.4.711
- Timpte C, Lincoln C, Pickett FB, Turner J, Estelle M (1995) The AXR1 and AUX1 genes of Arabidopsis function in separate auxin-response pathways. Plant J 8(4):561-569 https://doi.org/10.1046/j.1365-313X.1995.8040561.x
- Tiwari SB, Hagen G, Guilfoyle TJ (2004) Aux/IAA proteins contain a potent transcriptional repression domain. Plant Cell 16(2):533-543 https://doi.org/10.1105/tpc.017384
- Ulmasov T, Hagen G, Guilfoyle TJ (1997a) ARF1, a transcription factor that binds to auxin response elements. Science 276(5320):1865-1868 https://doi.org/10.1126/science.276.5320.1865
- Ulmasov T, Murfett J, Hagen G, Guilfoyle TJ (1997b) Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements. Plant Cell 9(11):1963-1971 https://doi.org/10.2307/3870557
- van der Graaff E, Schwacke R, Schneider A, Desimone M, Flugge U-I, Kunze R (2006) Transcription analysis of Arabidopsis membrane transporters and hormone pathways during developmental and induced leaf senescence. Plant Physiol 141(2):776-792 https://doi.org/10.1104/pp.106.079293
- Wang D, Pajerowska-Mukhtar K, Culler AH, Dong X (2007) Salicylic acid inhibits pathogen growth in plants through repression of the auxin signaling pathway. Curr Biol 17(20):1784-1790 https://doi.org/10.1016/j.cub.2007.09.025
- Wang H, Jones B, Li Z, Frasse P, Delalande C, Regad F, Chaabouni S, Latche A, Pech JC, Bouzayen M (2005) The tomato Aux/IAA transcription factor IAA9 is involved in fruit development and leaf morphogenesis. Plant Cell 17(10):2676-2692 https://doi.org/10.1105/tpc.105.033415
- Wang S, Bai Y, Shen C, Wu Y, Zhang S, Jiang D, Guilfoyle TJ, Chen M, Qi Y (2010) Auxin-related gene families in abiotic stress response in Sorghum bicolor. Funct Integr Genomics 10(4):533-546 https://doi.org/10.1007/s10142-010-0174-3
- Weijers D, Benkova E, Jager KE, Schlereth A, Hamann T, Kientz M, Wilmoth JC, Reed JW, Jurgens G (2005) Developmental specificity of auxin response by pairs of ARF and Aux/IAA transcriptional regulators. EMBO J 24(10):1874-1885 https://doi.org/10.1038/sj.emboj.7600659
- Willige BC, Isono E, Richter R, Zourelidou M, Schwechheimer C (2011) Gibberellin regulates PIN-FORMED abundance and is required for auxin transport-dependent growth and development in Arabidopsis thaliana. Plant Cell 23(6):2184-2195 https://doi.org/10.1105/tpc.111.086355
- Wu W, Liu Y, Wang Y, Li H, Liu J, Tan J, He J, Bai J, Ma H (2017) Evolution analysis of the Aux/IAA gene family in plants shows dual origins and variable nuclear localization signals. Int J Mol Sci 18(10):2107. doi:10.3390/ijms18102107
- Yamamoto KT, Mori H, Imaseki H (1992) cDNA cloning of indole-3-acetic acid-regulated Genes: Aux22 and SAUR from Mung Bean (Vigna radiata) hypocotyl tissue. Plant Cell Physiol 33(1):93-97
- Yu H, Soler M, San Clemente H, Mila I, Paiva JA, Myburg AA, Bouzayen M, Grima-Pettenati J, Gassan-Wang H (2015) Comprehensive genome-wide analysis of the Aux/IAA gene family in Eucalyptus: evidence for the role of EgrIAA4 in wood formation. Plant Cell Physiol 56(4):700-714 https://doi.org/10.1093/pcp/pcu215
- Zhao Z, Li Y, Zhao S, Zhang J, Zhang H, Fu B, He F, Zhao M, Liu P (2018) Transcriptome analysis of gene expression patterns potentially associated with premature senescence in Nicotiana tabacum L. Molecules 23(11):2856. doi:10.3390/molecules231128526