References
- C.G. Frage, B. Prazen, and R. Synovec, "Objective data alignment and chemometric analysis of comprehensive two dimensional separations with runto-run peak shifting on both dimensions", Anal. Chem., Vol. 73, p. 5833, 2011.
- J. Jeong, S. Xue, X. Zhang, S. Kim, and C. Shen, "An empirical Bayes model using a competition score for metabolite identification in gas chromatography mass spectrometry", BMC Bioinformatics, Vol. 12, p. 392, 2011. https://doi.org/10.1186/1471-2105-12-392
- J. Jeong, X. Xue, X. Xiang, S. Kim, and C. Shen "Model-based peak alignment of metabolic profiling from comprehensive two dimensional gas chromatography mass spectrometry", BMC Bioinformatics, Vol. 13, p. 27, 2012. https://doi.org/10.1186/1471-2105-13-27
- J. Jeong, X. Zhang, X. Shi, S. Kim, and C. Shen "An efficient post-hoc integration method improving peak alignment of metabolomics data from GCxGC/TOF-MS", BMC Bioinformatics, Vol. 14, p. 123, 2013. https://doi.org/10.1186/1471-2105-14-123
- S. Kim, A. Fang, B. Wang, J. Jeong, and X. Zhang "An optimal peak alignment for comprehensive two-dimensional gas chromatography mass spectrometry using mixture similarity measure", Bioinformatics, Vol. 27, p. 1660, 2011. https://doi.org/10.1093/bioinformatics/btr188
- S. Kim, I. Koo, A. Fang, X. Zhang "Smith-Waterman peak alignment for comprehensive two-dimensional gas chromatography-mass spectrometry", BMC Bioinformatics, Vol. 12, p. 235, 2011. https://doi.org/10.1186/1471-2105-12-235
- S. Kim, M. Ouyang, C. Shen, and X. Zhang "A new method of peak detection for analysis of comprehensive two-dimensional gas chromatography mass spectrometry data", Ann. Appl. Stat., Vol. 8, p. 1209, 2014. https://doi.org/10.1214/14-AOAS731
- V. G. Mispelaar, A. C. Tas, A. K. Smilde, P. J. Schoenmakers, and A. C. Asten "Quantitative analysis of target components by comprehensive twodimensional gas chromatography", J. Chromatogr. A, Vol. 1019, p. 15, 2003. https://doi.org/10.1016/j.chroma.2003.08.101
- C. Oh, X. Huang, F. Regnier, C. Buck, and X. Zhang "Comprehensive two-dimensional gas chromatography/ time-of-flight mass spectrometry peak sorting algorithm", J. Chromatogra., Vol. 1179, p. 205, 2008. https://doi.org/10.1016/j.chroma.2007.11.101
- K. Pierce, L. Wood, B. Wright, and R. Synovec "A comprehensive two-dimensional retention time alignment algorithm to enhance chemometric analysis of comprehensive two-dimensional separation data", Anal. Chem., Vol. 77, p. 7735, 2005. https://doi.org/10.1021/ac0511142
- B. Wang, A. Fang, J. Heim, B. Bogdanov, S. Pugh, M. Libardoni, and X. Zhang "Disco: distance and spectrum correlation optimization alignment for two-dimensional gas chromatography time-of-flight mass spectrometry-based metabolomics", Anal. Chem., Vol. 83, p. 5069, 2010.
- X. Zhang, C. Oh, C. Riley, and C. Buck "Current status of computational approaches for protein identification using tandem mass spectra", Curr. Proteomics, Vol. 4, p. 121, 2007. https://doi.org/10.2174/157016407783221349
- M. Mohiyuddin, J. Mu, J. Li, N. Asadi, M. Gerstein, A. Abyzov, and W. Wong, H. Lam, "Metasv: an accurate and integrative structural-variant caller for next generation sequencing", Bioinformatics, Vol. 31, p. 2741, 2015. https://doi.org/10.1093/bioinformatics/btv204
- A. Pesaranhader, S. Matwin, M. Sokolova, and R. Beiko, "simdef: Definition-based semantic similarity measure of genontology terms for functional similarity analysis of genes", Bioinformatics, Vol. 32, p. 1380, 2016. https://doi.org/10.1093/bioinformatics/btv755
- D. Xu, M. Zhang, Y. Xie, F. Wang, M. Chen, K. Zhu, and J. Wei, "Dtminer: identification of potential disease targets through biomedical literature mining", Bioinformatics, Vol. 32, p. 1, 2016. https://doi.org/10.1093/bioinformatics/btw326