DOI QR코드

DOI QR Code

Availability of MADLDI-TOF MS for Identification of Gram Positive Bacilli Isolated from Blood Culture

  • Choi, Jin-Un (Department of Laboratory Medicine, Chonnam National University Hospital) ;
  • Kim, Sang-Ha (Department of Laboratory Medicine, Konyang University Hospital) ;
  • Hwang, Su-Jeong (Department of Dental Hygiene, College of Medical Sciences, Konyang University) ;
  • Yu, Young-Bin (Department of Biomedical Laboratory Science, College of Medical Sciences, Konyang University) ;
  • Kim, Sunghyun (Department of Clinical Laboratory Science, College of Health Sciences, Catholic University of Pusan) ;
  • Kim, Young-Kwon (Department of Biomedical Laboratory Science, College of Medical Sciences, Konyang University)
  • Received : 2018.03.05
  • Accepted : 2018.05.17
  • Published : 2018.06.30

Abstract

In the present study, results of the identification of Gram-positive bacilli (GPB) were analyzed by using the MALDI-TOF MS technique to score each 2-year blood culture at a university hospital. In addition, 16S rRNA sequence analyses and MALDI-TOF MS results are compared to targeting strains that had been isolated two or more times within the same patient, to evaluate the usefulness of MALDI-TOF MS in GPB identification. According to the cut-off (${\geq}1.7$) criteria, there were 410 (57.5%) reliable strains and 303 (42.5%) non-identified strains among the GPB identification results of 713 strains, using a microflex MALDI Biotyper (Bruker Daltonik GmbH, Bremen, Germany). The isolation appeared most often in the following order: Corynebacterium striatum, Bacillus cereus, Bacillus subtilis, Paenibacillus urinalis, and Listeria monocytogenes. Nearly three-fourths, 66 out of 89 (74.2%) of the strains for Corynebacterium striatum; 44 out of 60 (73.3%) strains for Bacillus cereus; and all (25 out of 25, 100%) Listeria monocytogenes strains were identified by their high scores of 2.0 or higher. Most (293 strains out of 303) non-identified strains were strains isolated only once and not significant as infectious bacilli. A total of 43 out of 50 (86.0%) strains matched and were able to be identified based on the 16 rRNA sequencing comparison results of strains that were isolated twice or more within the same patient and significant as infection bacilli. Non-matching among 5 out of 7 strains was not identified, even with MALDI-TOF MS. In conclusion, GPB can be identified in blood cultures using MALDI-TOF MS. This can be done accurately with ease, rapidly, and at a low cost. It is also thought to be helpful in GPB diagnosis and treatment.

Keywords

References

  1. Adderso EE, Boudreaux JW, Hayden RT. Infections caused by coryneform bacteria in pediatric oncology patients. Pediatr Infect Dis J. 2008. 27: 136-141.
  2. Barberi C, Almuzara M, Join-Lambert O, Ramirez MS, Famiglietti A. Comparison of the Bruker MALDI-TOF Mass Spectrometry System and Conventional Phenotypic Methods for Identification of Gram-Positive Rods. PLoS ONE. 2014. 9: e106303. https://doi.org/10.1371/journal.pone.0106303
  3. Bernard K. The genus corynebacterium and other medically relevant coryneform-like bacteria. J Clin Mircobiol. 2012. 50: 3152-3158. https://doi.org/10.1128/JCM.00796-12
  4. Bizzini A, Durussel C, Bille J, Greub G, Prod'hom G. Performance of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of bacterial strains routinely isolated in a clinical microbiology laboratory. J Clin Microbiol. 2010. 48: 1549-1554. https://doi.org/10.1128/JCM.01794-09
  5. Carbonnelle E, Grohs P, Jacquier H, Day N, Tenza S, Dewailly A, Vissouarn O, Rottman M, Herrmann JL, Podglajen I, Raskine L. Robustness of two MALDI-TOF mass spectrometry systems for bacterial identification. J Microbiol Methods. 2012. 89:133-136. https://doi.org/10.1016/j.mimet.2012.03.003
  6. Chun J, Lee JH, Jung Y, Kim M, Kim S, Kim BK, et al. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol. 2007. 57: 2259-2261. https://doi.org/10.1099/ijs.0.64915-0
  7. Dubois D, Grare M, Prere MF, Segonds C, Marty N, Oswald E. Performances of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for rapid identification of bacteria in routine clinical microbiology. J Clin Microbiol. 2012. 50: 2568-2576. https://doi.org/10.1128/JCM.00343-12
  8. Funke G, von Graevenitz A, Clarridge JE 3rd, Berneard KA. Clinical microbiology of coryneform bacteria. Clin Microbiol Rev. 1997. 10: 125-129.
  9. Holland RD, Wilkes JG, Rafii F, Sutherland JB, Persons CC, Voorhees KJ, et al. Rapid identification of intact whole bacteria based on spectral patterns using matrix-assisted laser desorption/ionization with time-of-flight mass spectrometry. Rapid Commun Mass Spectrom. 1996. 10: 1227-1237. https://doi.org/10.1002/(SICI)1097-0231(19960731)10:10<1227::AID-RCM659>3.0.CO;2-6
  10. Levesque S, Dufresne PJ, Soualhine H, Doming M-C, Bekal S, Lefebvre B, et al. A side by side compariton of Bruker Biotyper and VITEK MS: Utility of MALDI-TOF MS Technolo gy for Microorganism Identification in a Public Health Reference Laboratory. PLoS ONE. 2015. 10: e0144878. https://doi.org/10.1371/journal.pone.0144878
  11. Renom F, Gomila M, Garau M, Gallegos MDC, Guerrero D, Lalucat J, Soriano JB. Respira tory infection by Corynebacterium striatum: epidemiological and clinical determinants. New Micorbes New Infect. 2014. 2: 106-114. https://doi.org/10.1002/nmi2.48
  12. Seng P, Drancourt M, Gouriet F, La Scola B, Fournier PE, Rolain JM, et al. Ongoing evolution in bacteriologyl routine identification of bacteria by matrix-assisted laser desorption ionization itme-offlight mass spectrometry. Clin Infect Dis. 2009. 49: 543-551. https://doi.org/10.1086/600885
  13. Severo CB, Guazzelli LS, Barra MB, Hochhegger B, Severo LC. Multiple pulmonary nodules caused by Corynebacterium striatum in an immunocompetent patient. Rev Inst Med Trop Sao Paulo. 2014. 56: 89-91. https://doi.org/10.1590/S0036-46652014000100015
  14. Stevenson LG, Drake SK, Shea YR, Zelazny AM, Murray PR. Evaluation of matrix-assisted laser desorption ionization-time of Flight mass spectrometry for identification of clinically important yeast species. J Clin Microbiol. 2010. 48: 3482-3486. https://doi.org/10.1128/JCM.00687-09
  15. Wayne PA. Clinical and Laboratory Standards Institute. Interpretive criteria for identify cation of bacteria and fungi by DNA target sequencing; approved guideline MM-18A. Clinical and Laboratory Standards Institute. 2007.