Fig. 1. Neighbor-joining phylogenic tree of endophytic fungi from Pinus densiflora and Junipreus rigida in Mt. Baekryeonsan and Johangsan. Internal transcribed spacer regions were used these sequence analysis to confirm the topological appropriation of isolates (1,000 replicates). Sphatularia flavida was used as an out-group.
Fig. 2. Colonies of strain 11F005 (Phanerochaete concrescens) grown for 7 days on PDA (A) and MEA (D). Colonies of strain 11G047 (Creosphaeria sassafras) grown for 7 days on PDA (B) and MEA (E). Colonies of strain 11G092 (Scopuloides rimosa) grown for 7 days on PDA (C) and MEA (F). PDA, potato dextrose agar; MEA, malt extract agar.
Fig. 3. Neighbor-joining phylogenetic tree based on a large subunit rDNA sequences. Donkia pulcherrima was used as an outgroup. Numbers on branches indicate bootstrap values (1,000 replicates). Fungal strain isolated in this study is in bold.
Fig. 4. Neighbor-joining phylogenetic tree based on a large subunit rDNA (A) and ß-tubulin gene (B) sequences. Neoidriella desertorum and Fusarium biseptatum were used as an outgroup in each tree. Numbers on branches indicate bootstrap values (1,000 replicates). Fungal strain isolated in this study is in bold.
Fig. 5. Neighbor-joining phylogenetic tree based on a large subunit rDNA sequences. Panus conchatus was used as an outgroup. Numbers on branches indicate bootstrap values (1,000 replicates). Fungal strain isolated in this study is in bold.
Fig. 6. Use of Bray-Curtis ordination to validate the effective factors that contribute the endophytic fungal community. Radiating lines are host plants and locality. Axis 1 and 2 have 90.16 % explanatory power.
Table 1. Molecular identifcation and the closest taxa of representative isolates using ITS rDNA region from Pinus densifora and Junipreus rigida in Mt. Baekryeonsan and Johangsan
References
- Carroll G. Fungal endophytes in stems and leaves: from latent pathogen to mutualistic symbiont. Ecology 1988;69:2-9. https://doi.org/10.2307/1943154
- Higgins KL, Arnold AE, Miadlikowska J, Sarvate SD, Lutzoni F. Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages. Mol Phylogenet Evol 2007;42:543-55. https://doi.org/10.1016/j.ympev.2006.07.012
- Eo JK, Lee BH, Eom AH. Diversity of endophytes isolated from Thuja koraiensis Nakai in the Korean peninsula. Kor J Mycol 2016;44:113-7.
- Gupta SP, Rana KS, Sharma DN, Chandrol GK. Indexing of importance value of micro flora on Sandstone Monuments at Narayan Temple, of Chhattisgarh, India. Int J Curr Microbiol Appl Sci 2014;3:327-32.
- Rodriguez RJ, Henson J, Van Volkenburgh E, Hoy M, Wright L, Beckwith F, Kim YO, Redman RS. Stress tolerance in plants via habitat-adapted symbiosis. ISME J 2008;2:404-16. https://doi.org/10.1038/ismej.2007.106
- Shin DS, Oh MN, Yang HC, Oh KB. Biological characterization of periconicins, bioactive secondary metabolites, produced by Periconia sp. OBW-15. J Microbiol Biotechnol 2005;15:216-20.
- Farjon A. World checklist and bibliography of conifers. Richimond: Royal Botanic Gardens, Kew; 1998.
- Lee TB. Gymnosperms in Korea. Bull Kwanak Arbor 1983;4:1-22.
- Lee TB. Illustrated Flora of Korea. Seoul: Hyangmunsa; 1985.
- Eo JK, Kim CK, Eom AH. Fungal endophytes isolated from needle leaves of three coniferous species on Mt. Seodae of Korea. Kor J Mycobiol 2015;43:133-6.
- Gardes M, Bruns TD. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 1993;2:113-8. https://doi.org/10.1111/j.1365-294X.1993.tb00005.x
-
Hubka V, Kolarik M.
${\beta}$ -tubulin paralogue tubC is frequently misidentified as the benA gene in Aspergillus section Nigri taxonomy: primer specificity testing and taxonomic consequences. Persoonia 2012;29:1-10. https://doi.org/10.3767/003158512X658123 - Kumar S, Stecher G, Tamura K. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for Bigger Datasets. Mol Biol Evol 2016;33:1870-4. https://doi.org/10.1093/molbev/msw054
- Eo JK, Kim CK, Lee HB, Eom AH. Diversity of endophytic fungi isolated from Pinus densiflora and Larix Kaempferi in Mt. Oser, Korea. Kor J Mycol 2013;41:137-41. https://doi.org/10.4489/KJM.2013.41.3.137
- Gil YJ, Eo JK, Eom AH. Molecular identification and diversity of endophytic fungi isolated from Pinus densiflora in Boeun, Korea. Kor J Mycol 2009;37:130-3. https://doi.org/10.4489/KJM.2009.37.2.130
- Volobuev S, Okun M, Ordynets A, Spirin V. The Phanerochaete sordida group (Polyporales, Basidiomycota) in temperate Eurasia, with a note on Phanerochaete pallida. Mycol Progress 2015;14:80. https://doi.org/10.1007/s11557-015-1097-0
- Quang DN, Hashimoto T, Fournier J, Stadler M, Radulovic N, Asakawa Y. Sassafrins A-D, new antimicrobial azaphilones from the fungus Creosphaeria sassafras. Tetrahedron 2005;61:1743-8. https://doi.org/10.1016/j.tet.2004.12.031
- Zeng PY, Wu JG, Liao LM, Chen TQ, Wu JZ, Wong KH. In vitro antioxidant activities of endophytic fungi isolated from the liverwort Scapania verrucosa. Genet Mol Res 2011;10:3169-79. https://doi.org/10.4238/2011.December.20.1
- Julich W. Notes on some basidiomycetes (Aphyllophorales and Heterobasidiomycetes). Persoonia 1982;11:421-8.
- Ainsworth GC, Hawksworth DL. Dictionary of the fungi. 8th ed. Wallingford: CAB International; 1995.
- Lee SG, Lee KJ, La YJ, Yang SI, Yi CK. Identification of Lophodermium species associated with needle-cast disease of pines in Korea. J Korean For Soc 1989;78:218-27.