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Isolation and Identification of Short Term Drought-Induced Genes in Zea mays L. Leaves

  • Rahman, Md. Atikur (Grassland & Forages Division, National Institute of Animal Science, Rural Development Administration) ;
  • Lee, Sang-Hoon (Grassland & Forages Division, National Institute of Animal Science, Rural Development Administration) ;
  • Choi, Gi Jun (Grassland & Forages Division, National Institute of Animal Science, Rural Development Administration) ;
  • Ji, Hee Jung (Grassland & Forages Division, National Institute of Animal Science, Rural Development Administration) ;
  • Kim, Won Ho (Grassland & Forages Division, National Institute of Animal Science, Rural Development Administration) ;
  • Lee, Ki-Won (Grassland & Forages Division, National Institute of Animal Science, Rural Development Administration)
  • Received : 2017.08.29
  • Accepted : 2017.09.18
  • Published : 2017.09.30

Abstract

Drought is one of the detrimental factors that impair plant growth and productivity. In this study, we applied annealing control primer (ACP)-based reverse transcriptase PCR (polymerase chain reaction) technique to identify differentially expressed genes (DEGs) in maize leaves in response to drought stress. Two-week-old maize seedlings were exposed to drought (DT) by suspending water supply. DEGs were screened after 3 days of DT-treated samples using the ACP-based technique. Several DEGs encoding 16.9 protein, antimicrobial protein, hypothetical protein NCLIV_068840, thioredoxin M-type were identified in maize leaves under drought stress. These genes have putative functions in plant defense response, growth and development. These identified genes would be useful for predictive markers of plant defense, and growth responses under drought stress in plants.

Keywords

References

  1. Kakumanu, A., Ambavaram, M.M.R., Klumas, C., Krishnan, A., Batlang, U., Myers, E., Grene, R. and Pereira, A. 2012. Effects of drought on gene expression in maize reproductive and leaf meristem tissue revealed by RNA-seq. Plant Physiology. 160:846-867. https://doi.org/10.1104/pp.112.200444
  2. Lee, K.-W., Kim, K.-H., Kim, Y.-G., Lee, B.H., and Lee, S.-H. 2012. Identification of MsHsp23 gene using annealing control primer system. Acta Physiologiae Plantarum. 34:807-811. https://doi.org/10.1007/s11738-011-0853-2
  3. Lee, S.C., Hwang, I.S., Choi, H.W. and Hwang, B.K. 2008. involvement of the pepper antimicrobial protein CaAMP1 gene in broad spectrum disease resistance. Plant Physiology. 148:1004-1020. https://doi.org/10.1104/pp.108.123836
  4. Leon-Martinez, D.G., Vielle-Calzada, J.-P. and Olalde-Portugal, V. 2012. Expression of phenazine biosynthetic genes during the arbuscular mycorrhizal symbiosis of Glomus intraradices. Brazilian Journal of Microbiology. 43:716-738. https://doi.org/10.1590/S1517-83822012000200037
  5. Li, H.-Y., Wang, T.-Y., Shi, Y.-S., Fu, J.-J., Song, Y.-C., Wang, G.-Y. and Li, Y. 2007. Isolation and characterization of induced genes under drought stress at the flowering stage in maize (Zea mays). DNA Sequence. 18:445-460. https://doi.org/10.1080/10425170701292051
  6. Liang, P. and Pardee, A.B. 1995. Recent advances in differential display. Current Opinion in Immunology. 7:274-280. https://doi.org/10.1016/0952-7915(95)80015-8
  7. Merewitz, E.B. 2012. Physiological, biochemical, and molecular mechanisms associated with drought tolerance in Agrostis species. PhD dissertation, The State University of New Jersey, New Brunswick, USA, pp 335.
  8. Mittler, R. 2006. Abiotic stress, the field environment and stress combination. Trends in Plant Science. 11:15-19. https://doi.org/10.1016/j.tplants.2005.11.002
  9. Okegawa, Y. and Motohashi, K. 2015. Chloroplastic thioredoxin m functions as a major regulator of Calvin cycle enzymes during photosynthesis in vivo. The Plant Journal. 84:900-913. https://doi.org/10.1111/tpj.13049
  10. Pierson, III. L.S. and Pierson, E.A. 2010. Metabolism and function of phenazines in bacteria: impacts on the behavior of bacteria in the environment and biotechnological processes. Applied Microbiology and Biotechnology. 86:1659-1670. https://doi.org/10.1007/s00253-010-2509-3
  11. Rahman, M.A., Alam, I., Kim, Y.-G., Ahn, N.-Y., Heo, S.-H., Lee, D.-G., Liu, G. and Lee, B.-H. 2015. Screening for salt-responsive proteins in two contrasting alfalfa cultivars using a comparative proteome approach. Plant Physiology and Biochemistry. 89:112-122. https://doi.org/10.1016/j.plaphy.2015.02.015
  12. Rahman, M.A., Kim Y.-G., Alam, I., Liu G., Lee, H., Lee, J.J. and Lee, B.-H. 2016. Proteome analysis of alfalfa roots in response to water deficit stress. Journal of Integrative Agriculture. 15:1275-1285. https://doi.org/10.1016/S2095-3119(15)61255-2
  13. Sharma, P.C., Matsumura, H. and Terauchi, R. 2007. Use of serial analysis of gene expression (sage) for transcript profiling in plants. In: Varshney RK, Tuberosa R (eds) Genomics-Assisted Crop Improvement: Vol. 1: Genomics Approaches and Platforms. Springer Netherlands, Dordrecht. pp. 227-244.
  14. Shou, H., Bordallo, P. and Wang, K. 2004. Expression of the Nicotiana protein kinase (NPK1) enhanced drought tolerance in transgenic maize. Journal of Experimental Botany. 55:1013-1019. https://doi.org/10.1093/jxb/erh129
  15. Swindell, W.R. 2006. The association among gene expression responses to nine abiotic stress treatments in Arabidopsis thaliana. Genetics. 174:1811-1824. https://doi.org/10.1534/genetics.106.061374
  16. Wang, P., Liu, J., Liu, B., Feng, D., Da, Q., Shu, S., Su, J., Zhang, Y., Wang, J. and Wang, H.-B. 2013. Evidence for a role of chloroplastic m-type thioredoxins in the biogenesis of photosystem II in Arabidopsis. Plant Physiology. 163:1710. https://doi.org/10.1104/pp.113.228353
  17. Wehner, G., Balko, C., Humbeck, K., Zyprian, E. and Ordon, F. 2016. Expression profiling of genes involved in drought stress and leaf senescence in juvenile barley. BMC Plant Biology. 16:3. https://doi.org/10.1186/s12870-015-0701-4
  18. Yang, X., Xiao, Y., Wang, X. and Pei, Y. 2007. Expression of a novel small antimicrobial protein from the seeds of motherwort (Leonurus japonicus) confers disease resistance in tobacco. Applied and Environmental Microbiology. 73:939-946. https://doi.org/10.1128/AEM.02016-06
  19. Yu, L.-X. and Setter, T.L. 2003. Comparative transcriptional profiling of placenta and endosperm in developing maize kernels in response to water deficit. Plant Physiology. 131:568. https://doi.org/10.1104/pp.014365
  20. Zhou, R., Yu, X., Ottosen, C.-O., Rosenqvist, E., Zhao, L., Wang, Y., Yu, W., Zhao, T. and Wu, Z. 2017. Drought stress had a predominant effect over heat stress on three tomato cultivars subjected to combined stress. BMC Plant Biology. 17:24. https://doi.org/10.1186/s12870-017-0974-x
  21. Zinselmeier, C., Sun, Y., Helentjaris, T., Beatty, M., Yang, S., Smith, H. and Habben, J. 2002. The use of gene expression profiling to dissect the stress sensitivity of reproductive development in maize. Field Crops Research. 75:111-121. https://doi.org/10.1016/S0378-4290(02)00021-7