References
- Kot W, Neve H, Heller KJ, Vogensen FK. 2014. Bacteriophages of Leuconostoc, Oenococcus, and Weissella. Front. Microbiol. 5: 186.
- Passerini D, Vuillemin M, Laguerre S, Amari M, Loux V, Gabriel V, et al. 2014. Complete genome sequence of Leuconostoc citreum strain NRRL B-742. Genome Announc. 2: e01179-14.
- Hemme D, Foucaud-Scheunemann C. 2004. Leuconostoc, characteristics, use in dairy technology and prospects in functional foods. Int. Dairy J. 14: 467-494. https://doi.org/10.1016/j.idairyj.2003.10.005
- Dan T, Liu W, Sun Z, Lv Q, Xu H, Song Y, et al. 2014. A novel multi-locus sequence typing (MLST) protocol for Leuconostoc lactis isolates from traditional dairy products in China and Mongolia. BMC Microbiol. 14: 150-158. https://doi.org/10.1186/1471-2180-14-150
- Kaur J, Lee S, Park YS, Sharma A. 2017. RAPD analysis of Leuconostoc mesenteroides strains associated with vegetables and food products from Korea. LWT Food Sci. Technol. 77: 383-388. https://doi.org/10.1016/j.lwt.2016.11.078
- Choi IK, Jung SH, Kim BJ, Park SY, Kim J, Han HU. 2003. Novel Leuconostoc citreum starter culture system for the fermentation of kimchi, a fermented cabbage product. Antonie Van Leeuwenhoek 84: 247-253. https://doi.org/10.1023/A:1026050410724
- Lee JS, Heo GY, Lee JW, Oh YJ, Park JA, Park YH, et al. 2005. Analysis of kimchi microflora using denaturing gradient gel electrophoresis. Int. J. Food Microbiol. 102: 143-150. https://doi.org/10.1016/j.ijfoodmicro.2004.12.010
- Chang JY, Chang HC. 2010. Improvements in the quality and shelf life of kimchi by fermentation with the induced bacteriocin-producing strain, Leuconostoc citreum GJ7 as a starter. J. Food Sci. 75: 103-110.
- Ventura M, Zink R. 2002. Specific identification and molecular typing analysis of Lactobacillus johnsonii by using PCR-based methods and pulsed-field gel electrophoresis. FEMS Microbiol. Lett. 217: 141-154. https://doi.org/10.1111/j.1574-6968.2002.tb11468.x
- Tamang JP, Tamang B, Schillinger U, Franz CMAP, Gores M, Holzapfel WH. 2005. Identification of predominant lactic acid bacteria isolated from traditionally fermented vegetable products of the Eastern Himalayas. Int. J. Food Microbiol. 105: 347-356. https://doi.org/10.1016/j.ijfoodmicro.2005.04.024
- Kingston JJ, Radhika M, Roshini MA, Murali HS, Batra HV. 2010. Molecular characterization of lactic acid bacteria recovered from natural fermentation of beet root and carrot Kanji. Indian J. Microbiol. 50: 292-298. https://doi.org/10.1007/s12088-010-0022-0
- Muiru WM, Koopmann B, Tiedemann AV, Mutitu EW, Kimenju JW. 2010. Use of repetitive extragenic palindromic (REP), enterobacterial repetitive intergenic consensus (ERIC) and BOX sequences to fingerprint Exserohilum turcicum isolates. J. Appl. Biosci. 30: 1828-1838
- Tafvizi F, Ebrahimi MT. 2015. Application of repetitive extragenic palindromic elements based on PCR in detection of genetic relationship of lactic acid bacteria species isolated from traditional fermented food products. J. Agric. Sci. Technol. 17: 87-98.
- Olive D M, Bean P. 1999. Principles and applications of methods for DNA based typing of microbial organisms. J. Clin. Microbiol. 37: 1661-1669.
- Versalovic J, Schneider M, Bruijn FJ, Lupski JR. 1994. Genomic fingerprinting of bacteria using repetitive sequence based polymerase chain reaction. Methods Mol. Biol. 5: 25-40.
- Gevers D, Huys G, Swings J. 2001. Applicability of rep-PCR fingerprinting for identification of Lactobacillus species. FEMS Microbiol. Lett. 205: 31-36. https://doi.org/10.1111/j.1574-6968.2001.tb10921.x
- Faridi F, Sedigheh J. 2015. REP-PCR typing, antibiogram pattern and distribution of clinical isolates of Pseudomonas aeruginosa in a teaching hospital in South of Iran. Mol. Med. J. 1: 47-55.
- Rademaker JLW, Hoste B, Louws FJ, Kersters K, Swings J, Vauterin L, et al. 2000. Comparison of AFLP and rep-PCR genomic fingerprinting with DNA-DNA homology studies: Xanthomonas as a model system. Int. J. Syst. Evol. Microbiol. 50: 665-677. https://doi.org/10.1099/00207713-50-2-665
- Lee CM, Sieo CC, Cheah YK, Abdullah N, Ho YW. 2012. Discrimination of probiotic Lactobacillus strains for poultry by repetitive sequenced based PCR fingerprinting. J. Sci. Food Agric. 92: 660-666. https://doi.org/10.1002/jsfa.4627
- Bounaix M-S, Gabriel V, Robert H, Morel S, Remaud-Simeon M, Gabriel B, et al. 2010. Characterization of glucanproducing Leuconostoc strains isolated from sourdough. Int. J. Food Microbiol. 144: 1-9. https://doi.org/10.1016/j.ijfoodmicro.2010.05.026
- Tamang B, Tamang JP, Schillinger U, Franz CMAP, Gores M, Holzapfel WH. 2008. Phenotypic and genotypic identification of lactic acid bacteria isolated from ethnic fermented bamboo tender shoots of North East India. Int. J. Food Microbiol. 121: 35-40. https://doi.org/10.1016/j.ijfoodmicro.2007.10.009
- Stephenson DP, Moore RJ, Allison GE. 2009. Comparison and utilization of repetitive-element PCR techniques for typing Lactobacillus isolates from the chicken gastrointestinal tract. Appl. Environ. Microbiol. 75: 6764-6776. https://doi.org/10.1128/AEM.01150-09
- Coudeyras S, Marchandin H, Fajon C, Forestier C. 2008. Taxonomic and strain-specific identification of the probiotic strain Lactobacillus rhamnosus 35 within the Lactobacillus casei group. Appl. Environ. Microbiol. 74: 2679-2689. https://doi.org/10.1128/AEM.02286-07
- Rademaker JLW, de Bruijn FJ. 1997. Characterization and classification of microbes by rep-PCR genomic fingerprinting and computer assisted pattern analysis, pp. 151-171. In Caetano- Anolles G, Gresshoff PM (eds.), DNA Markers: Protocols, Applications and Overviews. Willey-Liss Inc., New York.
- Baldy-Chudzik K, Niedbach J, Stosik M. 2003. Rep-PCR fingerprinting as a tool for the analysis of genomic diversity in Escherichia coli strains isolated from an aqueous/freshwater environment. Cell. Mol. Biol. Lett. 8: 793-798.
- Vuyst LD, Camu N, Winter TD, Vandemeulebroecke K, Perre VV, Vancanneyt M, et al. 2008. Validation of the (GTG)5-rep-PCR fingerprinting technique for rapid classification and identification of acetic acid bacteria, with a focus on isolates from Ghanaian fermented cocoa beans. Int. J. Food Microbiol. 125: 79-90. https://doi.org/10.1016/j.ijfoodmicro.2007.02.030
- Soltysik DA, Bednarek IA, Loch TM, Galka SE, Sypniewski DJ, Machnik GM, et al. 2010. Repetitive extragenic palindromic PCR (REP-PCR) as an alternative method for detection of bulking in activated sludge. Pol. J. Microbiol. 59: 11-20.
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