DOI QR코드

DOI QR Code

Virus Incidence of Sweet Potato in Korea from 2011 to 2014

  • Kim, Jaedeok (Crop Protection Division, National Academy of Agricultural Science) ;
  • Yang, Jung wook (Bioenergy Crop Research Institute, National Institute of Crop Science) ;
  • Kwak, Hae-Ryun (Crop Protection Division, National Academy of Agricultural Science) ;
  • Kim, Mi-Kyeong (Crop Protection Division, National Academy of Agricultural Science) ;
  • Seo, Jang-Kyun (Crop Protection Division, National Academy of Agricultural Science) ;
  • Chung, Mi-Nam (Bioenergy Crop Research Institute, National Institute of Crop Science) ;
  • Lee, Hyeong-un (Bioenergy Crop Research Institute, National Institute of Crop Science) ;
  • Lee, Kyeong-Bo (Bioenergy Crop Research Institute, National Institute of Crop Science) ;
  • Nam, Sang Sik (Bioenergy Crop Research Institute, National Institute of Crop Science) ;
  • Kim, Chang-Seok (Crop Protection Division, National Academy of Agricultural Science) ;
  • Lee, Gwan-Seok (Crop Protection Division, National Academy of Agricultural Science) ;
  • Kim, Jeong-Soo (Plant Medicine Major, Department of Bioresource Sciences, Andong National University) ;
  • Lee, Sukchan (Department of Genetic Engineering, Sungkyunkwan University) ;
  • Choi, Hong-Soo (Crop Protection Division, National Academy of Agricultural Science)
  • Received : 2016.08.31
  • Accepted : 2017.06.06
  • Published : 2017.10.01

Abstract

A nationwide survey was performed to investigate the current incidence of viral diseases in Korean sweet potatoes for germplasm and growing fields from 2011 to 2014. A total of 83.8% of the germplasm in Korea was infected with viruses in 2011. Commercial cultivars that were used to supply growing fields were infected at a rate of 62.1% in 2012. Among surveyed viruses, the incidence of five Potyvirus species that infect sweet potato decreased between 2012 and 2013, and then increased again in 2014. Representatively, the incidence of Sweet potato feathery mottle virus (SPFMV) was 87.0% in 2012, 20.7% in 2013 and then increased to 35.3% in 2014. Unlike RNA viruses, DNA viruses were shown to decrease continuously. The incidence of Sweet potato leaf curl virus (SPLCV) was 5.5% in 2003, 59.5% in 2011, and 47.4% in 2012. It then decreased continuously year by year to 33.2% in 2013, and then 25.6% in 2014. While the infection rate of each virus species showed a tendency to decline, the virus infection status was more variable in 2013 and 2014. Nevertheless, the high rate of single infections and mixed infection combinations were more variable than the survey results from 2012. As shown in the results from 2013, the most prevalent virus infection was a single infection at 27.6%, with the highest rate of infection belonging to sweet potato symptomless virus-1 (SPSMV-1) (12.9%). Compared to 2013, infection combinations were more varied in 2014, with a total of 122 kinds of mixed infection.

Keywords

References

  1. Adikini, S., Mukasa, S. B., Mwanga, R. and Gibson, R. W. 2015. Sweet potato cultivar degeneration rate under high and low sweet potato virus disease pressure zones in Uganda. Can. J. Plant Pathol. 37:136-147. https://doi.org/10.1080/07060661.2015.1004111
  2. Aritua, V., Barg, E., Adipala, E., Gibson, R. W., Lesemann, D. E. and Vetten, H. J. 2009. Host range, purification, and genetic variability in Sweet potato chlorotic fleck virus. Plant Dis. 93:87-93. https://doi.org/10.1094/PDIS-93-1-0087
  3. Arkorful, E., Appiah, A S. and Dzahini-Obiatey, H. 2015. Screening for sweet potato (Ipomoea Batatas L.) leaf curl virus (SPLCV) and its elimination using thermotherapy-meristem tip culture technique. J. Agric. Sci. 10:1-9.
  4. Ateka, E. M., Barg, E., Njeru, R. W., Thompson, G. and Vetten, H. J. 2007. Biological and molecular variability among geographically diverse isolates of Sweet potato virus 2. Arch. Virol. 152:479-488. https://doi.org/10.1007/s00705-006-0879-8
  5. Banks, G. K., Bedford, I. D., Beitia, F. J., Rodriguez-Cerezo, E. and Markham. P. G. 1999. A novel geminivirus of Ipomoea Indica (Convolvulacae) from Southern Spain. Plant Dis. 83:486.
  6. Cheong, E. J., Suzanne, H., Sarbagh, S. and Ruhui, L. 2010. Development of a reliable technique to eliminate Sweet potato leaf curl virus through meristem tip culture combined with therapy of infected ipomoea species. Korean J. Plant Resour. 23:233-241.
  7. Choi, E., Lee, G., Park, J., Lee, T. K., Choi, H. S. and Lee, S. 2012. Molecular characterization and an infectious clone construction of Sweet potato leaf curl virus (SPLCV) isolated from Korea. Acta Virol. 56:187-198. https://doi.org/10.4149/av_2012_03_187
  8. Clark, C. A. and Hoy, M. W. 2006. Effects of common viruses on yield and quality of beauregard sweetpotato in Louisiana. Plant Dis. 90:83-88. https://doi.org/10.1094/PD-90-0083
  9. Clark, C. A., Davis, J. A., Abad, J. A., Cuellar, W. J., Fuentes, S., Kreuze, J. F., Gibson, R. W., Mukasa, S. B., Tugume, A. K., Tairo, F. D. and Valkonen, J. P. T. 2012. Sweetpotato viruses: 15 years of progress on understanding and managing complex diseases. Plant Dis. 96:168-185. https://doi.org/10.1094/PDIS-07-11-0550
  10. Colinet, D. and Kummert, J. 1993. Identification of a sweet potato feathery mottle virus isolate from China (SPFMV-CH) by the polymerase chain reaction with degenerate primers. J. Virol. Methods 45:149-159. https://doi.org/10.1016/0166-0934(93)90099-D
  11. Fauquet, C. M. and Stanley, J. 2003. Geminivirus classification and nomenclature: progress and problems. Ann. Appl. Biol. 142:165-189. https://doi.org/10.1111/j.1744-7348.2003.tb00241.x
  12. Feng, G., Yifu, G. and Pinbo, Z. 2000. Production and deployment of virus-free sweetpotato in China. Crop. Prot. 19:105-111. https://doi.org/10.1016/S0261-2194(99)00085-X
  13. Fuentes, S. and Salazar, L. F. 2003. First report of Sweet potato leaf curl virus in Peru. Plant Dis. 87:98.
  14. Gibson, R. W., Mpembe, I., Alicai, T., Carey, E. E., Mwanga, R. O. M., Seal, S. E. and Vetten, H. J. 1998. Symptoms, aetiology and serological analysis of sweet potato virus disease in Uganda. Plant Pathol. 47:95-102. https://doi.org/10.1046/j.1365-3059.1998.00196.x
  15. Gibson, R. W., Wasswa, P. and Tufan, H. A. 2014. The ability of cultivars of sweetpotato in East Africa to 'revert' from Sweet potato feathery mottle virus infection. Virus Res. 186:130-134. https://doi.org/10.1016/j.virusres.2013.12.006
  16. Gutierrez, D. L., Fuentes, S. and Salazar, L. F. 2003. Sweetpotato virus disease (SPVD): distribution, incidence, and effect on sweetpotato yield in Peru. Plant Dis. 87:297-302. https://doi.org/10.1094/PDIS.2003.87.3.297
  17. Karyeija, R. F., Kreuze, J. F., Gibson, R. W. and Valkonen, J. P. T. 2000. Synergistic interactions of a potyvirus and a phloem-limited crinivirus in sweet potato plants. Virology 269:26-36. https://doi.org/10.1006/viro.1999.0169
  18. Karyeija, R. F., Kreuze, J. F., Gibson, R. W. and Valkonen, J. P. T. 2001. Variability of sweetpotato feathery mottle virus in Africa. Afr. Crop Sci. J. 9:293-300.
  19. Kil, E. J., Kim, J., Byun, H. S., Kwak, H. R., Kim, M. K., Choi, H. S., Chung, M. N. and Lee, S. 2014. First report of Sweet potato golden vein associated virus infecting sweet potato in Korea. Plant Dis. 98:1163.
  20. Kim, J., Kil, E. J., Kim, S., Seo, H., Byun, H. S., Park, J., Chung, M. N., Kwak, H. R., Kim, M. K., Kim, C. S., Yang, J. W., Lee, K. Y., Choi, H. S. and Lee, S. 2015. Seed transmission of Sweet potato leaf curl virus in sweet potato (Ipomoea batatas). Plant Pathol. 64:1284-1291. https://doi.org/10.1111/ppa.12366
  21. Kreuze, J. F., Perez, A., Untiveros, M., Quispe, D., Fuentes, S., Barker, I. and Simon, S. 2009. Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: a generic method for diagnosis, discovery and sequencing of viruses. Virology 388:1-7. https://doi.org/10.1016/j.virol.2009.03.024
  22. Kwak, H. R., Kim, J., Kim, M. K., Jung, M. N., Seo, J.-K., Jung, M.-N., Kim, J. S., Lee, S. and Choi, H. S. 2015. Molecular characterization of five potyviruses infecting Korean sweet potatoes based on analyses of complete genome sequences. Plant Pathol. J. 31:388-401. https://doi.org/10.5423/PPJ.OA.04.2015.0072
  23. Kwak, H. R., Kim, M. K., Shin, J. C., Lee, Y. J., Seo, J. K., Lee, H. U., Jung, M. N., Kim, S. H. and Choi, H. S. 2014. The current incidence of viral disease in Korean sweet potatoes and development of multiplex rt-PCR assays for simultaneous detection of eight sweet potato viruses. Plant Pathol. J. 30:416-424. https://doi.org/10.5423/PPJ.OA.04.2014.0029
  24. Kwak, H. R., Kim, M. K., Chung, M. N., Lee, S. H., Park, J. W., Kim, K. H. and Choi, H. S. 2006. Virus disease incidences of sweet potatoes in Korea. Plant Pathol. J. 22:239-247. https://doi.org/10.5423/PPJ.2006.22.3.239
  25. Kwak, H. R., Kim, M. K., Jung, M. N., Lee, S. H., Park, J. W., Kim, K. H., Ko, S. J. and Choi, H. S. 2007. Genetic diversity of sweet potato feathery mottle virus from sweet potatoes in Korea. Plant Pathol. J. 23:13-21. https://doi.org/10.5423/PPJ.2007.23.1.013
  26. Li, F., Xu, D., Abad, J. and Li, R. 2012. Phylogenetic relationships of closely related potyviruses infecting sweet potato determined by genomic characterization of Sweet potato virus G and Sweet potato virus 2. Virus Genes 45:118-125. https://doi.org/10.1007/s11262-012-0749-2
  27. Loebenstein, G. and Thottappilly, G. 2009. The sweetpotato. Springer Science & Business Media.
  28. Lotrakul, P. and Valverde, R. A. 1999. Cloning of a DNA-A-like genomic component of Sweet potato leaf curl virus: nucleotide sequence and phylogenetic relationships. Mol. Plant Pathol. On-line No.0206LOTRAKUL.
  29. Lotrakul, P., Valverde, R. A., Clark, C. A., Sim, J. and De La Torre, R. 1998. Detection of a geminivirus infecting sweet potato in the United States. Plant Dis. 82:1253-1257. https://doi.org/10.1094/PDIS.1998.82.11.1253
  30. Lotrakul, P., Valverde, R. A., Clark, C. A., Hurtt, S. and Hoy, M. W. 2002. Sweetpotato leaf curl virus and related geminiviruses in sweetpotato. Acta Hortic. 583:135-141.
  31. Lozano, G., Trenado, H. P., Valverde, R. A. and Navas-Castillo, J. 2009. Novel begomovirus species of recombinant nature in sweet potato (Ipomoea batatas) and Ipomoea indica: taxonomic and phylogenetic implications. J. Gen. Virol. 90:2550-2562. https://doi.org/10.1099/vir.0.012542-0
  32. Moyer, J. W. and Salazar, L. F. 1989. Viruses and virus-like diseases of sweet potato. Plant Dis. 73:451-455. https://doi.org/10.1094/PD-73-0451
  33. Mukasa, S. B., Rubaihayo, P. R. and Valkonen, J. P. T. 2006. Interactions between a crinivirus, an ipomovirus and a potyvirus in coinfected sweetpotato plants. Plant Pathol. 55:458-467. https://doi.org/10.1111/j.1365-3059.2006.01350.x
  34. Paprotka, T, Boiteux, L. S., Fonseca, M. E. N., Resende, R. O., Jeske, H., Faria, J. C. and Ribeiro, S. G. 2010. Genomic diversity of sweet potato geminiviruses in a Brazilian germplasm bank. Virus Res. 149:224-233. https://doi.org/10.1016/j.virusres.2010.02.003
  35. Park, J., Kim, S., Choi, E., Kwak, H. R., Kim, M. K., Lee, K. Y., Choi, H. S. and Lee, S. 2011. Molecular characterization of Sweet potato leaf curl virus (SPLCV) isolates from Korea: phylogenetic relationship and recombination analysis. Acta Virol. 55:327-335.
  36. Rodriguez, P., Bejerman, P. E. N., Luque, A. V. and Feo, L. D. 2012. Complete nucleotide sequence of an Argentinean isolate of sweet potato virus G. Virus Genes 45:593-595. https://doi.org/10.1007/s11262-012-0784-z
  37. Tairo, F., Mukasa, S. B., Jones, R. A. C., Kullya, A., Rubaihayo, P. R. and Valkonen, J. P. T. 2005. Unravelling the genetic diversity of the three main viruses involved in Sweet Potato Virus Disease (SPVD), and its practical implications. Mol. Plant Pathol. 6:199-211. https://doi.org/10.1111/j.1364-3703.2005.00267.x
  38. Untiveros, M., Fuentes, S. and Kreuze, J. 2008. Molecular variability of Sweet potato feathery mottle virus and other potyviruses infecting sweet potato in Peru. Arch. Virol. 153:473-483. https://doi.org/10.1007/s00705-007-0019-0
  39. Untiveros, M., Fuentes, S. and Salazar, L. F. 2007. Synergistic interaction of Sweet potato chlorotic stunt virus (Crinivirus) with Carla-, Cucumo-, Ipomo-, and Potyviruses infecting sweet potato. Plant Dis. 91:669-676. https://doi.org/10.1094/PDIS-91-6-0669
  40. Wang, M., Abad, J., Fuentes, S. and Li, R. 2013. Complete genome sequence of the original Taiwanese isolate of sweet potato latent virus and its relationship to other potyviruses infecting sweet potato. Arch. Virol. 158:2189-2192. https://doi.org/10.1007/s00705-013-1705-8
  41. Wang, Q. C. and Valkonen, J. P. T. 2008. Elimination of two viruses which interact synergistically from sweetpotato by shoot tip culture and cryotherapy. J. Virol. Methods 154:135-145. https://doi.org/10.1016/j.jviromet.2008.08.006
  42. Yun, W. S., Lee, Y. H. and Kim, K. H. 2002. First report of Sweet potato latent virus and Sweet potato chlorotic stunt virus isolated from sweet potato in Korea. Plant Pathol. J. 18:126-129. https://doi.org/10.5423/PPJ.2002.18.3.126