References
- Baker, M. (2010) Next-generation sequencing: adjusting to data overload. Nature Methods, 7: 495-499. https://doi.org/10.1038/nmeth0710-495
- Bao, H., Guo, H., Wang, J., Zhou, R., Lu, X. and Shi, S. (2009) MapView: visualization of short reads alignment on a desktop computer. Bioinformatics, 25: 1554-1555. https://doi.org/10.1093/bioinformatics/btp255
- Harrison, N. and Kidner, C.A. (2011) Next-generation sequencing and systematics: What can a billion base pairs of DNA sequences data do to you? Taxon, 60: 1552-1566.
- Jeong, J.E., Kang, S.W., Hwang, H.J., Chae, S-H., Patnaik, B.B., Han, Y.S., Lee, J.B., Jo, Y.H., Lee, B.L., Seog, D-H. and Lee, Y.S. (2013) Expressed sequence tags (ESTs) analysis of Tenebrio molitor larvae. Entomological Research, 43: 168-176. https://doi.org/10.1111/1748-5967.12019
- Jeong, J.E., Patnaik, B.B., Kang, S.W., Hwang, H-J., Park, S.Y., Wang, T.H., Park, E.B., Lee, J.B., Nam, M-M., Jo, Y.H., Han, Y.S., Lee, J-S., Park, H.S. and Lee, Y.S. (2015) Characterization of Physa acuta expressed sequence tags and transcript mining following cadmium exposure. Genes and Genomics. doi:10.1007/s13258-015-0334-x.
- Kang, S.W., Hwang, H.J., Park, S.Y., Wang, T.H., Park, E.B., Lee, T.H., Hwang, U.W., Lee, J.S., Park, H.S., Han, Y.S., Lim, C.E., Kim, S. and Lee, Y.S. (2014) Mollusks sequence database: Version II. Korean Journal of Malacology, 30: 429-431. https://doi.org/10.9710/kjm.2014.30.4.429
- Kim, K.M., Park, J-H., Bhattacharya, D. and Yoon, H.S. (2014) Applications of next-generation sequencing to unravelling the evolutionary history of algae. International Journal of Systematic and Evolutionary Microbiology, 64: 333-345. https://doi.org/10.1099/ijs.0.054221-0
- Lee, Y-S., Jo, Y-H., Kim, D-S., Kim, D-W., Kim, M-Y., Choi, S-H., Yon, J-O., Byun, I-S., Kang, B-R., Jeong, K-H. and Park, H-S. (2004) Construction of BLAST server for Mollusks. Korean Journal of Malacology, 20: 165-169.
- Mardis, E.R. (2013) Next-Generation Sequencing Platforms. Annual Review of Analytical Chemistry, 6: 287-303. https://doi.org/10.1146/annurev-anchem-062012-092628
- Riesgo, A., Andrade, S.C.S., Sharma, P.P., Novo, M., Perez-Porro, A.R., Vahtera, V., Gonzalez, V.L., Kawauchi, G.Y. and Giribet, G. (2012) Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa. Frontiers in Zoology, 9: 33. https://doi.org/10.1186/1742-9994-9-33
- Sanger, F., Nicklen, S. and Coulson, A.R. (1977) DNA sequencing with chain-terminating inhibitors. Proceedings of National Academy of Sciences, USA, 74: 5463-5467. https://doi.org/10.1073/pnas.74.12.5463
- Tsiliki, G., Tsaramirsis, K. and Kossida, S. (2014) AmalgamScope: Merging annotations data across the Human genome. BioMed Research International, Article ID 893501.
- Zhu, Z., Niu, B., Chen, J., Wu, S., Sun, S. and Li, W. (2013) MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data. Bioinformatics, 29: 122-123. https://doi.org/10.1093/bioinformatics/bts567
Cited by
- Sequencing, De Novo Assembly, and Annotation of the Transcriptome of the Endangered Freshwater Pearl Bivalve, Cristaria plicata, Provides Novel Insights into Functional Genes and Marker Discovery vol.11, pp.2, 2016, https://doi.org/10.1371/journal.pone.0148622
- Assembly, Functional Annotation, and Discovery of SSR Markers vol.2016, pp.2314-4378, 2016, https://doi.org/10.1155/2016/4169587
- Transcriptome sequencing and de novo characterization of Korean endemic land snail, Koreanohadra kurodana for functional transcripts and SSR markers vol.291, pp.5, 2016, https://doi.org/10.1007/s00438-016-1233-9
- Classification and Phylogenetic Studies of Cephalopods from four countries of South-East Asia vol.32, pp.1, 2016, https://doi.org/10.9710/kjm.2016.32.1.55
- A Mitochondiral Cytochrome Oxidase I gene based identification of Corbicula ssp. commercially available in South Korea vol.32, pp.2, 2016, https://doi.org/10.9710/kjm.2016.32.2.127
- Felder, 1862 vol.46, pp.2, 2016, https://doi.org/10.1111/1748-5967.12164
- Transcriptomic Analysis of the Endangered Neritid Species Clithon retropictus: De Novo Assembly, Functional Annotation, and Marker Discovery vol.7, pp.10, 2016, https://doi.org/10.3390/genes7070035
- Transcriptome Analysis of the Tadpole Shrimp (Triops longicaudatus) by Illumina Paired-End Sequencing: Assembly, Annotation, and Marker Discovery vol.7, pp.12, 2016, https://doi.org/10.3390/genes7120114
- Transcriptome Characterization for Non-Model Endangered Lycaenids, Protantigius superans and Spindasis takanosis, Using Illumina HiSeq 2500 Sequencing vol.16, pp.12, 2015, https://doi.org/10.3390/ijms161226213
- De novo Transcriptome Generation and Annotation for Two Korean Endemic Land Snails, Aegista chejuensis and Aegista quelpartensis, Using Illumina Paired-End Sequencing Technology vol.17, pp.3, 2016, https://doi.org/10.3390/ijms17030379
- Deciphering the Link between Doubly Uniparental Inheritance of mtDNA and Sex Determination in Bivalves: Clues from Comparative Transcriptomics vol.10, pp.2, 2018, https://doi.org/10.1093/gbe/evy019
- ) using the Illumina platform vol.48, pp.1, 2018, https://doi.org/10.1111/1748-5967.12292
- Transcriptome analysis of air-breathing land slug, Incilaria fruhstorferi reveals functional insights into growth, immunity, and reproduction vol.20, pp.1, 2019, https://doi.org/10.1186/s12864-019-5526-3
- 연체동물 NGS 데이터 분석을 위한 PANM 데이터베이스 업데이트 (Version II) vol.32, pp.3, 2015, https://doi.org/10.9710/kjm.2016.32.3.185
- Transcriptome studies of the floodwater mosquito, AEDES VEXANS (Diptera: Culicidae) with potential as secondary vectors using Illumina HiSeq 4,000 sequencing vol.50, pp.12, 2015, https://doi.org/10.1111/1748-5967.12440